PI0005987 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGATGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTCGACACAATTACAACGGATGATGGCAGAGAAGTTGCCCGACACTAACATCCAAGAATCTGAAGGGATTAAAACCCTTACACAGCGGAATAAATTCACAGAACCTTTTTAA ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGATGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTCGACACAATTACAACGGATGATGGCAGAGAAGTTGCCCGACACTAACATCCAAGAATCTGAAGGGATTAAAACCCTTACACAGCGGAATAAATTCACAGAACCTTTTTAA ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGATGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTCGACACAATTACAACGGATGATGGCAGAGAAGTTGCCCGACACTAACATCCAAGAATCTGAAGGGATTAAAACCCTTACACAGCGGAATAAATTCACAGAACCTTTTTAA MTSSSRAPKHTWTKEEEAKLVECLMELVSSGGWRSDNGTFRPGYSTQLQRMMAEKLPDTNIQESEGIKTLTQRNKFTEPF Homology
BLAST of PI0005987 vs. ExPASy TrEMBL
Match: A0A5D3CQS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00390 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of PI0005987 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23 Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of PI0005987 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23 Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of PI0005987 vs. ExPASy TrEMBL
Match: A0A5D3BZU3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00280 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of PI0005987 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-21 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of PI0005987 vs. NCBI nr
Match: KAA0066605.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14213.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 122.1 bits (305), Expect = 2.2e-24 Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of PI0005987 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 3.2e-23 Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of PI0005987 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.5 bits (293), Expect = 5.4e-23 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of PI0005987 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 6.6e-21 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of PI0005987 vs. NCBI nr
Match: KAA0067707.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK21933.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 8.6e-21 Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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