PI0005911 (gene) Melon (PI 482460) v1

Overview
NamePI0005911
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description50S ribosomal protein L30
Locationchr11: 21642534 .. 21652555 (-)
RNA-Seq ExpressionPI0005911
SyntenyPI0005911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCGTTAAAGTTTTGTTTAAAAAATACCCTTGAATTATTGAAAAGTTTCATATATACCCTTAAACTTAAAAAAAAAAAAAAAAACTCTATTAATCCAATTTTTACACTAAATTTCATAGCACACAAATGAATACCAAGGTTTTAAGTTAAAACTATAGTTTTAAATTTTCATCGATATATCAATATTTCTATCGATATTTCACATCTTCATGGGTTCGATATTAATAGAAGGGGTAGACCGATATTTCCATTACATCGTAGACAAGTCCACGAATCACAAAAAATAAACATCAAAATGACACTAATATAAATAATAGACATGTTTACTTATATGAAGATAATTAAATATTTATTAACTAATTTAAATTTATTTTTTAAATTTTTTGTTTTTATAATTTTTCCAAAAATATCCATCAAAATCAAAATTTCTATAAAATTAAAAATTTGATATATCCATCAACATTGATATTTTAAAGCTTGGTTAAAACAAAAATTCCACAAAATCTCACAAAGTTTCAAAAAACAAATTCTCCTTAAAACATACTAAAATAATAACTAGCCAAATAAAAGATCTCTCAGCTATCACTTGTGTTAATAGACAAATACATTTTTTTATTTGATAATTAATTGTATGTTAATTACAATAATAAGTATTGAGATTGGTTGTGTTCATGATCTATCATTGTGTGTTAATAGTCAAATTTGGTTGGTGAAAAAATTGGTGTAAAATTTGGATTATTTTATTAACTTTATTTTTGCCCAATGACATTTATGAAATTTTTCAATAATTTAGAACTATTTTTGAAACAAAACTATAACGATTTTCATCCAAAATTAATGGTATTTTTGAATTTTTTTTTTGTAAGTATAAAGACATTTTTTAAACTATTTTTTTTACCCAAACTACGAAATTCGGGGAATGTTTTCTTTTTTTCTTGTAAGGGCCTGTTTGGAATGAGTTAAGAAAAAAATGTTTTCCCAAAAATGCATTTTCATTTAAACATTTTTCTAAAAACTCTTTAAAAGAAAAATATGTGTTTGACAACTTTTTTCAAAAGGTTTTTTAAGTAAAAATTTGTTGGATTTATTATATACTAGAATTTTTGAAAAAGTTGGTTTTAAGTGTTTATCCTAAACCATTTTAAATTTTTTATTATATACTAAAATAATTTTTTTTATTTATTATAGAAATTTATTATATACTAAAAATTATGTACTTTTTTTCAAAAGTATAAACACATTTAAACGGTATTTTACGATCGTGTAAAATACAGTAGTCGAATGTTGGTCGGCGACAATCGACAAAGAAAGTTGGTGTGGATAGTCGAAGGTATGACCAGAGTATTTCATACAAATCAGAGAGATTAACTATTAAACCCTCAAAATTCATTTTTCTAAAGTTGTTTTTAAGTGTTTATCCTAAACGATTACTTTATAATCATTTTTTCAAAATCTATTTTAAATGGTTGTCAAACATATAATTTTTTTCAAAATAACTTACTTTTTAATTTAATCAATTGAAAATACAATCCAAACAAAATTTAACCAAAAAAAAATAAACAACCCTAGAATCTTTCCCCTCTCTTAGCAGCAGCCGCGTCCCTCTTCGTTTCTAACCTCTCCATTCTGTTGTGTGTGTCCTCAGTTCTCACTGATTCGCCAGCCGGCAGCCATCCTCCCTTCCCCGATCACCGTCAGTCCGACACCGCCAATCCATCACAGCTACGTCACGATTCCAGCTTCAAAGTAGCCGCACCTTCCCTCCCTTTCCCCTTATGTCCTGAAATCCTCATAGTCTATCACCGGCTCACGGTCACTCCACAATTCGGCAATCTCATTTCCCAGTTCCACACGACCACGATTCCAGTTCCAGCTCCTTAAAGGTTAATTAATTTAAGTTTTTCTTTCATTGAAACTTGAAAGGATTAAACCCACCATCCGACTCCCTTTACGCTTTCATTACAGCTAGAGTTATGGTTAATTTAATTTAAAATTTCTACATAGAGCTCTCTAGACTATTTGGATAGACGATTTTGCTGCGCATTTTCAAACGATGTTTTTGTGACTAATGCTGCTTTTTGAATGGTATTAGAGCTCTCTCTATGGTTTTTGTCCTTTTGGATAGATGATTTTATGACTAATGAATTTTGTATTGATTTGGATACAATTTGAGGTTGTCATTTCATTTGAGATTGTCACTGGATTTTGTTATTTGAAATGGTATTGGAAATACTTCATTTAAAGAATTTGAAAATAAGGAATTGTTGAAAACAATTATTTGGTTGAAATTAAATGAAATTTGGTTAAAAAAACTGAGATTGAATTTTCCTGCGGGGAACCTTATCCCGCCATGGTTGTCCTTACCCAAATCAGGGATGGAAATGGAATAGGGGGGCGAGGAAGGGTTCTCCGCCCCACTCAGCCCTTCACCGTGGACATCTCTGTCCCTACTCACTGCTTCTGTTTCAGTCTCTCTCTCGATGTTTAACTCTTCTCTCTCAGATTGATGCTTGAGCCTCAACATCAGCATCTACTTGTCACTTCCCTTCATTTCTCTCCTTTCTCCTCCTAGAACTGATAAGTTTGGATTTTTCATTATCTTGTTCTATGCTTTCTGCCCTTCTGATCTTCTGTTATGTTTTTCTCCCTGAAATCTACTTTTCTGGGGTGTTTAATTTTCATTTGGTATTGGGAAAAATTAATGGCTAAATTATAAAAAATGCCCCTCAACTTTGCATTTTGTGACAAAAATACCCTACACTTTCAAAAATTTCAAAAATACCGTCAAACTTTCAAAAAAGGTTAAAAAATGCCCTTAACATTTTGTTTAAAAAATTCCCTTAAAAACTTTAAAAACTACTCTCACAATTAATATATGAACTAAAACGGTTAATATCTTGTAGAAAAATAACTCTAAATTAAACATGTTGTTAGTATAATGATAAATTTATTTAAAGTTGTTAGGTTTTATGAGATTGACAATATTTGTTTTACGGCTTCAGATATTTGAAATGTTATTGCATTGCCCTTGTTTTGTAAAAGTGATGGTCTACAGAGAATCAATTCTGCAAGATACTTTCCTTATCGGCGGTTGCCTTTTCTGTTTCTCCTGCCTACATTTTTCTTATTCAATGCATGGTTGCTATGAAAGTTAGAGTTTCTCATTATGATTCCAATGTGCATATTAAAGGACACTTAGTCCTCCGGTTAGGGTTGACAATTCAGTTTGTTTTAAGAGCAATATTTATATTATCTTGTTGTAGCCCTTTCTTCTTGTGTTAAAAGAAGGGAACATTCAGTGTTTTGAAAGGAGTGCGCGCTTAGGTGCAAAGCGCAACATGAGCGCCTTGGATAGGCGGGCGAGGCGTATTGAGGAAGGTGCATGCCTTTGTGAACATTCAGTGTTTTGAAAGGAGCATGCGCCTTGGATAGGCGGGCGAGGCGTATTGAGGAAGGTGCGTGCCTTTGTGCGCCTTCCACAAAGCGTCAAGGTGCAACCTATTAGGGTTTTCGTTTTTTGTTAAAAATCCAATAAAACGAAGTAGTTTAATATATAATATAATATATTATATTTTTTTAACCTATTTTAAAATAAAGGAAAGACTCTCCCTACTCTTCTTCTTCTTCTTCTTTTTCTTCTTCAACAAAAGGAAAGACTCGAACACCTCCTCGTCTCCTCCTTTTCTTCTTCTTCGTTTTCTTCTGCAACAGCACCCTTTTGAAGACTCTGTTTAAAAAAAAAACAGAACACTCTTCAATTCAGCTTCTCCTTATCCTTCTTCTTCTTCTTCTTTTTCTTCAAAAAAAAAAAAAAAAAAAACACACCTCCTTGGCTCAATTTTTTGAATTCTCTGTTTTATGTAGTCTCTATTCTTTGAGTTTCTTCAAAAAGCAGAGAAGACAGGTAAAAAACAGCAACCATTTAAGGCTTCAACTTCATCTCTTCTTGCTGAAAATTCTCCAAAACAGTAGCGATCCAACTTCCAAGTTCAATTTTCATCAAATTTTTGGTATGTCCCAAGTTAACTCCTAACTTTTTAGTTTTGTGATCAATTTCTTAAGTTAGTTTCTGATTAGTTTAATTTTTTAAATAATTAGATGGCTGAGTACAGTTTAAGAAAAGATCCAATGCTCAATTGCAAAATGAGCAAGATTTTAATACCTTAGTGTGTGGATTTTGTTCAAAAACAACTAAAGAAGGAGTTTATAGAATGAAACAACACCTTGATGGTGGTTATAGAAATGCCGTTGCGTGAAGGAAGAAATTAAAGCCTACATGTCCAAGAAAAATGAGATTAAAGAGCAAAGAAATTTGATTATTGATATTGACACGGAGGCATATGGTATTAAGGATGAAGATGTAAGGAACCTTCCACCTGAAACTCAGAAAACCTCAATAATGGCAAAACAGAGACAGTACTCTGATATACTATATTCAATATAATTCAAGAGTTCCCAAAACAGCAAGGATAAACAACAAGGAATGAGAGTAAGAGACGATAATAAGGACAAACGACCAACTCCTTCGAGAAGGCTAGAAACTTCTCCCTAAAAGCTCTAAACAACCTTTACCCAAAATAAACCCTACTTTTCTCAATCCCCAAACATTCTCTTTTTATACCCACATCACTGTGGGACCCTCAGGTGAATTCCTCCTCTTCAGCAACATTCTTGGAGGCCTTTGCTTGTGTTATTCCCTTCTTGCCCTTCCTTTTATACGTGTGTAATATTTGGGGTCTAAAAGAAGATGATGATGAAGCGTGTGTAAGTAACCCGAATAAAAGAGTGGCATCGGGTTCAAAGAAGCCAAGGCAAAAGGGTCCGATGGATGTTTATTTTACACCTAACCTGGAGGTTGTGGTTCAAAATCGAAAGAATGACAAAGGAAAGGGAAAACAAAGCACGATGAATGAAGCATACAAAAAGGAGATGAGGGAGCAAACCATCCAAAGAATTGCTCGTTGGTTTTATGCTGCTGGAGCCTCTAAATGCATGCACTTATGATAGCTTTGCCCCTATGCTTGAGGCAATAGGACAATTTGGTCTTGGATTGAAACCACCATTGTATCATGAACTGAACCATTGTATCATGAACTGAGAGTGCTGTGTTTGAAAAAGGAATTAGAATCCACAAATGAGTTGATGAAGAGCCATAAGGCAGAGTGGGCGAAGGTTGGATGCACCATTATGGTTAATGGATGGATGGATAGAAGGAATAGGACATTAATTAACTTTTCAGTTAATAGTCCTAAAGGCACCATGCTCATTGTGTCTATTGATGCTTCATCTTATGTGAAGGACGGAAAGAAAATGTTTGAGTTGCTCGACAATTTCGTAGAGCGCATTGGAGTAGCCAATGTCGTAAAAGTTATTACTAATAGTGCCTCAACAAATGTTATGGTAGGTAAGAAAGAATGCAAAGTACCAACTCTTTATTAAATTTGTTAGACTTATGTGCTTACACATTTAAGCCTAAGTATGTTCTTATTTTACTTTGTTAATATGGAGATTGTTAGAAGCCTAACGACCACAATTAATTTGGTCTCCATGTGTTGCTCATTGTTTAGATTTGACGTTGGAGGATATATACAAGATCCCACATATTTGCAAAACATTAAAAGGAGGCATGGATATTAGCAATTTCATTTATGTTCGTCCAGGATTGTTGAGCATGATGAGGTGGTTTACTAATCAAAAGGAGTTAGTTAGACCAACTAAGACTCGATTTGCTACAGCTTGCATAACATTATCAAGTTTACATTGCCAACAAAATAATTGAGAAAGCGGTTTACTTTGGACAAATGGAAAAATAGCAAATGGAGCAAAGAACAAGGAAAATGGGTTGCTCAAACAATTTCGTTAACAACTTTTTGGAATATCATCGTGTTTGCTTTGAAAGTATCTGGCCCTTTAGTGCGAGTACTTAGGTTGGTAGATGGTGAGAAGAAGCCTCCTATGAGATACATTTACGAGGCTATGGATAGAGCTAAGGAGGCCATTGCCAAATCTTTTGATGGTAAGGAAGAAAAGTACAAAGACATTTTTACAATAATTGATCGACGATGGGAGCTTCAATTGCACTGTCCTTTGCATGCAGCGAGATATTATCTAAACTCAGAATTCTATTACTCAAATCCAAATATTCAAGCTGATGATGAAATTGTCAATGGGTTGTACACGTGCATAACAACGATGGTTGCTTCCTTGGACATTCAAGATAAGATACTTGGAGAGCTAACCAAATATAAAAATGCTGAAGGACTATTTGGACAGTCTTTAGCAATTAGATAGAGGGACAAAATATCTCCAGGTAAACTTTAACTTTAAGTTTTTGATTAAACATTGAATAACATTCAAATTGCTAAATATACTTTTGATCTATAGTCGAATGGTGTGAATGTCAATCAACTCCCAATTTGCAAAAGTTGTAGTACAAAACATTGAATGACAATCAACTCCCAATTTGCAAAAGTTTGGTGTGAGAACTTTAGGTTTCACTTGTAGTGCCTCGGGATGTGAACATACTTGGAGCGTTTTTGAACCGGTTAGGTATCTTCTATTACTTGTAGTGCCTTTAGATGTGGATGTAATCGAACTGAGCAATAAAACCTTTGTTATATACTTGCAGCTTCATATCAAGAAAAGGAATAGACTTGCTTAAAGTCGACTAAATGATTTAGTCTTCATAAAATGTAATAGAGCACTGAAGTGTCGATATAATATTCGAGACATCGTTGACCCCATCTCTTTAAAAGAAATCGATGATAGTAATGGATGGTTGCTTGGAAGAATGGATGACGATTCAGAGGAGGATGATGATCTTGTTTTCGACGACGATTCTTTAACATGGGGCGATGTTTCAAGAGCTGCTGGAGCAAAAGAACCTACCTATTATTCTAGAGCTGGTTCCCCAAGAACTAAGTCTAAGACTAAAGCTTCATGTTCATGTTCATCTTCCACACAACTATCGCCCCAGCCACCCCCACACCAGTTAATTTGGATGAATCTGAGACGAACGAAAAAGATATAGATGGTTATAAGTCGAATGATGGAGAGAATGAAGATGAAGACCTATTTAGTGAAGATGACTTTGGTCTTTAGGATTTTAGAATTGTATTTGTGATTGTGTTTGTGTCATTTCACTTAACTTTGTGTTTTTTTTTTTTTTTAAAAGGAAACGAGTCTCACTATCATTAATATTAAAAATAGAGATACAAAAACTCAAAGTACAAGAGGGTTATACAGTGAGCAGTGGAGGGGGGATCAACATGTGCACTCGGGCATCTCAACTAGGTCTTAACTTTGTGTTCAACGACTAATATTTAACTCTTATACATCTTTTGTTTTTTTTGTATAAGTCTCATTTCTATCTATCTATGTTTTGGTTGTGTAAATAAACATGTATAGTACATATATATATTTTTAATTTTTTATATAGCGCGTCTCATGGAAAAAAGCCCACATCTTTCTAGGTGCTTTGCGCCAGACTCTAGAGGGTCATTGGGCCTTAGAGTGCCTTGGGCATTTTAAAACACTGGGAACATTACATATATTGGAGATATCCCATTCTCCTCACTACTGTGCATTGTGATTCATGAGAAAGGATTCTTTGAGTTTAAAGGGAGCTTAGATCATTCGAACAAAGAGGATTTGTTCAATGGAAAGATGCAACACTGTGAGAGAGGGTCTCACAAACTTGAGGGGGGCTCAAGTTCTTCGGAGAGATTTTGGGAGAGCTTAAGACCATCTCACTAAAAAGTAGATAACAAATGAAGAAATTTGGAGGTGGAAGTAGTGTCTATAGGCTAAATTTTCAAAAAAAAAAAAAAAAAACGAAAAACCAAATCGTATCAAACGAGGCCAATATGATTTGTTTTTAGATTGATTCTTTTCACCTTCTTCATTGAAGTAGGTTTCAAGTCCAAGACCGACGTAGCGTCAGAGCCTCATTGACTCGTTCATCGATCTATTTTGATGCAAAAGGAGTGAGATAATATCAACTCAAGAAACTTTAAATAAATATATCATTATACTAACCATAGAGATATTTTTAGTTTAGAGTTATTTTTGCAATGAGATATTAATGGTTTTAGGTAATATTGAGAGTAGTTTTTTTAACTTTTTTTAAGTTTGAGGATAATTTTGGAACTTTTCAATAGTTTAGGGGTATTTTTGAAACAAAAATTTAATGGTTTCCATTCAAAACTAATTGCAAGGGTATTTTTGAACCTTTTTTAAAAGTTTGACGATATTTTTGAAAATTTTGAAAGTTTAGGGGTAATTTGGACACACAATTGCAAAGTTGAGGGGTATTTTTTATATTTATTGTTTTAGTGGACTTGTTGGTTTATTTAGTTTGAGCTCATAAGATTGATGGGTTTTTGTACCATTCTCAAGATATATCTTTAGTTACTCTCCACCCCCTCTCACTTTATGGTTTTTCCTCAGACTTTCAGTGGCCGTTCTTGATGTGAGGACTCCAGTTTCGTGATAATTTTATGTGCAACTGTTCTTTAAAACATGACAATGTTAGTATAATCAAATTTGGTATCTTTTAATGGGTGGCTGCAAAATGGATGTTTGCCACTCAAATGCCTTGCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTACAAATATTTTGGTTTTGAATACTGCATTGTTCTTGAACTTGGGATATAATACTGTTGGCCAAACCACTGAAGGTCCTTAACAGAACCAAAATGTATTTGTAAAATTAGTTTCTCATTCAATTGTTGTTAGATATAAAACTAACAAAGAGTTCGATATGTGAACCCCAGTTAATTGAAATTAGGAACCTTTAGGTATGTGAAACCCTTCAATCTTAAACACTAAAACCCTCAAATCAAATTTATTTCAACACTAAGGATTGAGTTAGACACGGATTGCATTAAGATCAAGGTATCAAGCCCTTGAGACAAAATAATTTCTTTGGCCAAGATTCGAACACTCTACTAGATAAGATGTTCAATCCTACTAATGTTTTTGTTTCCTGGCATATGCTTTCACCTTTCTTAATGTTTCATTTTAAAACCAAATGCTGTGTCTACGGAAAGTCTCATTTAAATTTCAGACTCTATGTTGATGAAAATGATATAGCTGAATGGTATATTGGAACAGTTCTACTTGTTTACTTTTTAGAACATCGCTTTTAGAGGACTTCATTGAAAGATTGAAGCTGATGTAAAGATGAAGAGTATTGACTTGAGATGCAAATCGTGGCATAGATGTGGTTTCTACATAAAACTATTATCCATATCCGTTCATTCCTTTGATGTGCAACTAGAGCATTTTTAGAGCTTTCAATCTACTGAAGATGATGAATGATCATTTCTTTATTTGAAATTTGGAGACTACTGGAGTTCTCCTGCCCAACAAATTAAAAGTAAACTACAGAATTTCCTTGGCAACAGCTTGGCATGGCTGCATACATGTTTATTTCATTCACTTCTATATTTAAAAAACAAATTCGAAGACTTTGCTGTGATGCTTAGATGAGACCGTTGATGTCTCTGCAGAGGAAATTGTTTCTTATTATTTATTTATTTATTTTTGTAGATTTTGCAGATCTTGGACATGAATGCCTTTAAGGCTTTCAAAGCCAGTGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATACCGGGAACAAGGAGACTTCACAGACGTACATTGGAGGTATTGCGGCTCCGAAAATGTAACCGAACTGTCATGCACGGGAACACGCCTACTGTTAGAGGAATGGTTCAACAGGTTGCTATATATACTTGTTCTCTACTGGGCATGCACACACTACAGAACTGCCTCATGGACTGAAGTTTTTTTTTTGGTTGATTATAGGTAAAGCGATTAGTAGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGATGGAACAGCACAGGGCCCTACGACTGCCGTTAGTAATAAATCACCTTCCGGCACCAAGTTCTGCTTCTGCCTCTTGA

mRNA sequence

ATGGAAACCGTTAAAGTTTTCCATCCTCCCTTCCCCGATCACCGTCAGTCCGACACCGCCAATCCATCACAGCTACGTCACGATTCCAGCTTCAAAGTAGCCGCACCTTCCCTCCCTTTCCCCTTATGTCCTGAAATCCTCATAGTCTATCACCGGCTCACGGTCACTCCACAATTCGGCAATCTCATTTCCCAGTTCCACACGACCACGATTCCAATTTTGCAGATCTTGGACATGAATGCCTTTAAGGCTTTCAAAGCCAGTGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATACCGGGAACAAGGAGACTTCACAGACGTACATTGGAGGTATTGCGGCTCCGAAAATGTAACCGAACTGTCATGCACGGGAACACGCCTACTGTTAGAGGAATGGTTCAACAGGTAAAGCGATTAGTAGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGATGGAACAGCACAGGGCCCTACGACTGCCGTTAGTAATAAATCACCTTCCGGCACCAAGTTCTGCTTCTGCCTCTTGA

Coding sequence (CDS)

ATGGAAACCGTTAAAGTTTTCCATCCTCCCTTCCCCGATCACCGTCAGTCCGACACCGCCAATCCATCACAGCTACGTCACGATTCCAGCTTCAAAGTAGCCGCACCTTCCCTCCCTTTCCCCTTATGTCCTGAAATCCTCATAGTCTATCACCGGCTCACGGTCACTCCACAATTCGGCAATCTCATTTCCCAGTTCCACACGACCACGATTCCAATTTTGCAGATCTTGGACATGAATGCCTTTAAGGCTTTCAAAGCCAGTGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTGAGAGGCATACCGGGAACAAGGAGACTTCACAGACGTACATTGGAGGTATTGCGGCTCCGAAAATGTAACCGAACTGTCATGCACGGGAACACGCCTACTGTTAGAGGAATGGTTCAACAGGTAAAGCGATTAGTAGTGGTTGAAACAGAAGAAATGTATAAAGCTCGTAAACAGAAGATGGAACAGCACAGGGCCCTACGACTGCCGTTAGTAATAAATCACCTTCCGGCACCAAGTTCTGCTTCTGCCTCTTGA

Protein sequence

METVKVFHPPFPDHRQSDTANPSQLRHDSSFKVAAPSLPFPLCPEILIVYHRLTVTPQFGNLISQFHTTTIPILQILDMNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS
Homology
[Close]
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match: Q8FS51 (50S ribosomal protein L30 OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=rpmD PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-04
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 97  LYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVE 151
           L IT V+G  GT+  HR  L  L L++   +V+  +TP VRGMVQ V+ L+VVE
Sbjct: 3   LKITQVKGTIGTKPKHRDNLRSLGLKRIRHSVVRPDTPEVRGMVQAVRHLIVVE 56

[Close]
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match: A1KB09 (50S ribosomal protein L30 OS=Azoarcus sp. (strain BH72) OX=418699 GN=rpmD PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 99  ITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVE 151
           +TLV+ + GT++ HR T+  L LR+ N TV   +TP VRGMV +V  LV VE
Sbjct: 8   VTLVKSVIGTKQSHRATVRGLGLRRLNHTVELVDTPAVRGMVTKVAYLVKVE 59

[Close]
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match: C3PL27 (50S ribosomal protein L30 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CIP 107346 / CN-1) OX=548476 GN=rpmD PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0 

Query: 97  LYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVE 151
           L IT V+G+ GT+  HR  +E L L++   +V+  +TP +RGMV +V+ LV VE
Sbjct: 3   LKITQVKGLVGTKPNHRANMESLGLKRIGHSVVKQDTPIIRGMVHKVRHLVTVE 56

[Close]
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match: Q8NSX3 (50S ribosomal protein L30 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=rpmD PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.7e-04
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 97  LYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVE 151
           L IT ++G  GT+  HR  L  L L++   TV+  +TP VRGM+  V+ L+VVE
Sbjct: 3   LKITQIKGTVGTKPKHRENLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVE 56

[Close]
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match: A4QBL5 (50S ribosomal protein L30 OS=Corynebacterium glutamicum (strain R) OX=340322 GN=rpmD PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.9e-04
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 97  LYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRGMVQQVKRLVVVE 151
           L IT ++G  GT+  HR  L  L L++   TV+  +TP VRGM+  V+ L+VVE
Sbjct: 3   LKITQIKGTVGTKPKHRDNLRSLGLKRIRHTVIRPDTPEVRGMILAVRHLIVVE 56

[Close]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match: A0A1S3C214 (50S ribosomal protein L30 OS=Cucumis melo OX=3656 GN=LOC103495997 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.5e-47
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKASVPIAWSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQKME+HRALR PLVINHLPAPSSASAS
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEEHRALRPPLVINHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match: A0A5A7VAZ6 (50S ribosomal protein L30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00090 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.5e-47
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKASVPIAWSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQKME+HRALR PLVINHLPAPSSASAS
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEEHRALRPPLVINHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match: A0A0A0LN29 (Ribosomal_L30 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G416090 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 101/108 (93.52%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKASVPIAWS NLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQKMEQHRALR PLVINHLPAPSSASAS
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match: A0A6J1FUA4 (uncharacterized protein LOC111448848 OS=Cucurbita moschata OX=3662 GN=LOC111448848 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 7.4e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKA+VPI WSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKANVPITWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQK+EQH ALR PLV+NHLP+PSSASAS
Sbjct: 61  MLQQVKRLVVVETEEMYKARKQKVEQHAALRPPLVVNHLPSPSSASAS 108

[Close]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match: A0A6J1G641 (uncharacterized protein LOC111451121 OS=Cucurbita moschata OX=3662 GN=LOC111451121 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKA+VPIAWSPNLYITLVRGIPGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKANVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASA 186
           M+QQVKRLVVVETEEM+KARKQK+EQH++LR PLV+NHLPAPSS S+
Sbjct: 61  MIQQVKRLVVVETEEMFKARKQKVEQHKSLRPPLVVNHLPAPSSGSS 107

[Close]
BLAST of PI0005911 vs. NCBI nr
Match: XP_008455933.1 (PREDICTED: 50S ribosomal protein L30 [Cucumis melo] >XP_008455934.1 PREDICTED: 50S ribosomal protein L30 [Cucumis melo] >KAA0062861.1 50S ribosomal protein L30 [Cucumis melo var. makuwa] >TYK09532.1 50S ribosomal protein L30 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 7.3e-47
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKASVPIAWSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQKME+HRALR PLVINHLPAPSSASAS
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEEHRALRPPLVINHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. NCBI nr
Match: KAG6604875.1 (hypothetical protein SDJN03_02192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.0 bits (502), Expect = 7.3e-47
Identity = 98/113 (86.73%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 73  ILQILDMNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGN 132
           IL++LDMNAFKAFKA+VPIAWSPNLYITLVRGIPGTRRLHRRTLE LRLRKCNRTVM  N
Sbjct: 32  ILEVLDMNAFKAFKANVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWN 91

Query: 133 TPTVRGMVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASA 186
           TPTVRGM+QQVKRLVVVETEEM+KARKQK+EQH++LR PLV+NHLPAPSS S+
Sbjct: 92  TPTVRGMIQQVKRLVVVETEEMFKARKQKVEQHKSLRPPLVVNHLPAPSSGSS 144

[Close]
BLAST of PI0005911 vs. NCBI nr
Match: XP_004151902.1 (uncharacterized protein LOC101219925 [Cucumis sativus] >KGN63218.1 hypothetical protein Csa_022304 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-46
Identity = 101/108 (93.52%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKASVPIAWS NLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQKMEQHRALR PLVINHLPAPSSASAS
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. NCBI nr
Match: XP_023512952.1 (uncharacterized protein LOC111777540 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 4.0e-45
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKA+VPIAWSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQK+EQH ALR PLV+NHLPAPSSASAS
Sbjct: 61  MLQQVKRLVVVETEEMYKARKQKVEQHVALRPPLVVNHLPAPSSASAS 108

[Close]
BLAST of PI0005911 vs. NCBI nr
Match: XP_022944386.1 (uncharacterized protein LOC111448848 [Cucurbita moschata] >KAG6570904.1 hypothetical protein SDJN03_29819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           MNAFKAFKA+VPI WSPNLYITLVRG+PGTRRLHRRTLE LRLRKCNRTVM  NTPTVRG
Sbjct: 1   MNAFKAFKANVPITWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINHLPAPSSASAS 187
           M+QQVKRLVVVETEEMYKARKQK+EQH ALR PLV+NHLP+PSSASAS
Sbjct: 61  MLQQVKRLVVVETEEMYKARKQKVEQHAALRPPLVVNHLPSPSSASAS 108

[Close]
BLAST of PI0005911 vs. TAIR 10
Match: AT5G55140.1 (ribosomal protein L30 family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 69/109 (63.30%), Postives = 88/109 (80.73%), Query Frame = 0 

Query: 79  MNAFKAFKASVPIAWSPNLYITLVRGIPGTRRLHRRTLEVLRLRKCNRTVMHGNTPTVRG 138
           M+ F+AFKA VPI WS +LYITLVRG+PGTR+LHRRTLE + LR+C+RTV+H N  ++RG
Sbjct: 1   MSGFRAFKAQVPIEWSQSLYITLVRGLPGTRKLHRRTLEAMGLRRCHRTVLHSNNSSIRG 60

Query: 139 MVQQVKRLVVVETEEMYKARKQKMEQHRALRLPLVINH-LPAPSSASAS 187
           M+ QVKR+VVVETEEMY ARK+    H+ALR PLV++H  PA  S++ S
Sbjct: 61  MIDQVKRMVVVETEEMYNARKEAEANHKALRPPLVVSHSSPATDSSNMS 109

The following BLAST results are available for this feature:
BLAST of PI0005911 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8FS512.7e-0448.1550S ribosomal protein L30 OS=Corynebacterium efficiens (strain DSM 44549 / YS-31... [more]
A1KB093.6e-0450.0050S ribosomal protein L30 OS=Azoarcus sp. (strain BH72) OX=418699 GN=rpmD PE=3 S... [more]
C3PL273.6e-0444.4450S ribosomal protein L30 OS=Corynebacterium aurimucosum (strain ATCC 700975 / D... [more]
Q8NSX34.7e-0444.4450S ribosomal protein L30 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM... [more]
A4QBL57.9e-0444.4450S ribosomal protein L30 OS=Corynebacterium glutamicum (strain R) OX=340322 GN=... [more]
BLAST of PI0005911 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C2143.5e-4793.5250S ribosomal protein L30 OS=Cucumis melo OX=3656 GN=LOC103495997 PE=3 SV=1[more]
A0A5A7VAZ63.5e-4793.5250S ribosomal protein L30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0LN291.3e-4693.52Ribosomal_L30 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G4160... [more]
A0A6J1FUA47.4e-4588.89uncharacterized protein LOC111448848 OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
A0A6J1G6411.3e-4487.85uncharacterized protein LOC111451121 OS=Cucurbita moschata OX=3662 GN=LOC1114511... [more]
BLAST of PI0005911 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455933.17.3e-4793.52PREDICTED: 50S ribosomal protein L30 [Cucumis melo] >XP_008455934.1 PREDICTED: 5... [more]
KAG6604875.17.3e-4786.73hypothetical protein SDJN03_02192, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_004151902.12.8e-4693.52uncharacterized protein LOC101219925 [Cucumis sativus] >KGN63218.1 hypothetical ... [more]
XP_023512952.14.0e-4590.74uncharacterized protein LOC111777540 [Cucurbita pepo subsp. pepo][more]
XP_022944386.11.5e-4488.89uncharacterized protein LOC111448848 [Cucurbita moschata] >KAG6570904.1 hypothet... [more]
BLAST of PI0005911 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55140.11.7e-3363.30ribosomal protein L30 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005996Ribosomal protein L30, bacterial-typeTIGRFAMTIGR01308TIGR01308coord: 97..150
e-value: 1.0E-17
score: 61.5
IPR005996Ribosomal protein L30, bacterial-typePANTHERPTHR15892MITOCHONDRIAL RIBOSOMAL PROTEIN L30coord: 79..184
IPR005996Ribosomal protein L30, bacterial-typeHAMAPMF_01371_BRibosomal_L30_Bcoord: 94..151
score: 14.835123
IPR005996Ribosomal protein L30, bacterial-typeCDDcd01658Ribosomal_L30coord: 97..150
e-value: 3.7036E-17
score: 69.7574
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilyGENE3D3.30.1390.20coord: 95..156
e-value: 1.4E-17
score: 64.9
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilySUPERFAMILY55129Ribosomal protein L30p/L7ecoord: 96..150
IPR016082Ribosomal protein L30, ferredoxin-like fold domainPFAMPF00327Ribosomal_L30coord: 98..147
e-value: 1.4E-15
score: 56.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR15892:SF4RIBOSOMAL PROTEIN L30, FERREDOXIN-LIKE FOLD DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 79..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005911.1PI0005911.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003735 structural constituent of ribosome