PI0005868 (gene) Melon (PI 482460) v1

Overview
NamePI0005868
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 5778001 .. 5778229 (-)
RNA-Seq ExpressionPI0005868
SyntenyPI0005868
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTACGTTTGCTTGTGGCAAAGAAGGTTGTTTACCATCGACTTCTCCACCACCGTCGAAACTTGTGAATACTTTGGATGCATTTCGTCCTCCACTATAGCTAACAGTGTCGTAACTTTCCCTTTCCCATCTTTATGATTGTGACATCCATCATGGACTCCAATGATGTTGCACAGTATCTTTCTTCTCCTTTGATAGGAGGAACTTCACAATTCATAATTGTGTAA

mRNA sequence

ATGGGTACGTTTGCTTGTGGCAAAGAAGGTTGTTTACCATCGACTTCTCCACCACCGTCGAAACTTTGTCGTAACTTTCCCTTTCCCATCTTTATGATTGTGACATCCATCATGGACTCCAATGATGTTGCACAGTATCTTTCTTCTCCTTTGATAGGAGGAACTTCACAATTCATAATTGTGTAA

Coding sequence (CDS)

ATGGGTACGTTTGCTTGTGGCAAAGAAGGTTGTTTACCATCGACTTCTCCACCACCGTCGAAACTTTGTCGTAACTTTCCCTTTCCCATCTTTATGATTGTGACATCCATCATGGACTCCAATGATGTTGCACAGTATCTTTCTTCTCCTTTGATAGGAGGAACTTCACAATTCATAATTGTGTAA

Protein sequence

MGTFACGKEGCLPSTSPPPSKLCRNFPFPIFMIVTSIMDSNDVAQYLSSPLIGGTSQFIIV
Homology
[Close]
BLAST of PI0005868 vs. ExPASy TrEMBL
Match: A0A0A0LHB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060440 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 37/59 (62.71%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 1  MGTFACGKEGCLPSTSPPPSKL--CRNFP--------FPIFMIVTSIMDSNDVAQYLSS 50
          MG FAC KEGCLPSTSP  SKL   R  P        F IFMI TS  DSN+VAQYLSS
Sbjct: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSS 59

[Close]
BLAST of PI0005868 vs. NCBI nr
Match: KGN61163.1 (hypothetical protein Csa_021186 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 37/59 (62.71%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 1  MGTFACGKEGCLPSTSPPPSKL--CRNFP--------FPIFMIVTSIMDSNDVAQYLSS 50
          MG FAC KEGCLPSTSP  SKL   R  P        F IFMI TS  DSN+VAQYLSS
Sbjct: 1  MGMFACEKEGCLPSTSPLSSKLVNTRFIPIVDSVVTSFSIFMIRTSTTDSNEVAQYLSS 59

The following BLAST results are available for this feature:
BLAST of PI0005868 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005868 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHB71.7e-0662.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060440 PE=4 SV=1[more]
BLAST of PI0005868 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61163.13.5e-0662.71hypothetical protein Csa_021186 [Cucumis sativus][more]
BLAST of PI0005868 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005868.1PI0005868.1mRNA