PI0005609 (gene) Melon (PI 482460) v1

Overview
NamePI0005609
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 3085351 .. 3085698 (+)
RNA-Seq ExpressionPI0005609
SyntenyPI0005609
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGCTGCAATTGTAGCCTATGGCTAAATGGAAAGCTAAGGGGATGGAGGCGTCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCGGAGGCTCGAGCAATTTGGTTTTGGGTTATGTTGTTCAGTATGGATCAAATTGAAGGGTTGATGAATTGTTTTGCTAGATTTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATTTAGTTGCGAGGGGGGGGGGGGGGGGGGGGGGGTGGGCGGGGATGCTATTCTGTTCATTCTAAAAGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA

mRNA sequence

ATGGAAAGCTGCAATTGTAGCCTATGGCTAAATGGAAAGCTAAGGGGATGGAGGCGTCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCGGAGGCTCGAGCAATTTGGTTTTGGATTTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATTTAGTTGCGAGGGGGGGGGGGGGGGGGGGGGGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA

Coding sequence (CDS)

ATGGAAAGCTGCAATTGTAGCCTATGGCTAAATGGAAAGCTAAGGGGATGGAGGCGTCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCGGAGGCTCGAGCAATTTGGTTTTGGATTTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATTTAGTTGCGAGGGGGGGGGGGGGGGGGGGGGGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA

Protein sequence

MESCNCSLWLNGKLRGWRRHDLPSHCYINELNSEARAIWFWILSPRNDKDLGRKALIKKANRFSCEGGGGGGGFHLCIFAVADVDM
Homology
[Close]
BLAST of PI0005609 vs. ExPASy TrEMBL
Match: A0A0A0K7G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004610 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-29
Identity = 70/88 (79.55%), Postives = 73/88 (82.95%), Query Frame = 0 

Query: 1  MESCNCSLWLNGKLRGWRRHDLPSHCYINELNSEARAIWFWILSPRNDKDLGRKALIKKA 60
          MES +CSLWLNG+LRGWR HDLPSHCYINELNSEA+AI    LSPRNDKDLGRKALIKKA
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAI--LNLSPRNDKDLGRKALIKKA 60

Query: 61 NRFSCEGGG--GGGGFHLCIFAVADVDM 87
          NR SCEG        FHLCIFAVADVDM
Sbjct: 61 NRSSCEGDAILFILKFHLCIFAVADVDM 86

[Close]
BLAST of PI0005609 vs. NCBI nr
Match: KGN45670.1 (hypothetical protein Csa_005676 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 5.4e-29
Identity = 70/88 (79.55%), Postives = 73/88 (82.95%), Query Frame = 0 

Query: 1  MESCNCSLWLNGKLRGWRRHDLPSHCYINELNSEARAIWFWILSPRNDKDLGRKALIKKA 60
          MES +CSLWLNG+LRGWR HDLPSHCYINELNSEA+AI    LSPRNDKDLGRKALIKKA
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAI--LNLSPRNDKDLGRKALIKKA 60

Query: 61 NRFSCEGGG--GGGGFHLCIFAVADVDM 87
          NR SCEG        FHLCIFAVADVDM
Sbjct: 61 NRSSCEGDAILFILKFHLCIFAVADVDM 86

The following BLAST results are available for this feature:
BLAST of PI0005609 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005609 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7G52.6e-2979.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004610 PE=4 SV=1[more]
BLAST of PI0005609 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45670.15.4e-2979.55hypothetical protein Csa_005676 [Cucumis sativus][more]
BLAST of PI0005609 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005609.1PI0005609.1mRNA