PI0005589 (gene) Melon (PI 482460) v1

Overview
NamePI0005589
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 18045563 .. 18047562 (+)
RNA-Seq ExpressionPI0005589
SyntenyPI0005589
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCCAGCAAGGTTCGGAGCCCTTTTTGGTAAGAGTCAGTAAGTATCCTTGTTCTACTTTACATTTAGAATTGGAGTTAAGTGTTTGAATGATATGGTGAACCGTTTGAGCCCTTTAGTTGTTATGTTTGGGTGAACTTTGAAGTATTGGACTAAATGCCTTGAACTGTTTTGGAATAGATTAAAGTGTGTTAGATTAGTTTTTAACCTGTGAAGGCTTGCTGTTTGTAGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGGTTTTGGTTGATTTTGGGTAAGATTATCCTTTTAAACACTCTCAATTTCAATTAAGGTCTCAAATTGAGTTCTAATTTCTAAATTCTTATGGATTCTTTAGACTTCGAGGAAGTTGATATTTGTCCAAGTGGATTTATGATGGAGAATTGTAGGATAGTCAATTGAGGCAACTAGCTTCCACATCCCTTCCAAAATATGAATTTGACTATTGCGGTTTGATGAATGTTTGAAAATATGTTTGAAAATATGTTTGGAAGTATGTATTGTATTATTTGAAACTGTTTGAAATTGTTTTGGATGTTCTAAATGTTTTCCTATTTGAAGGCATGTTTTATTTGATTTGAGGATTGACCAAAAGTGTATTGTATATTTTCAGTTGATTATGTCAAATGGAAGTGTTGACTATTTTGAATGATAGTTGGAAGTGCTTTGACTGATTTTGAATTGAAAGTGTTTCTGTTTTTGTTTTGGTTACTTCTGTAAACTTTTGAAAGGTATGAATGGTTTGAATTGAGGAATTCTTCTGTTGAAATTGTTATTTGAAACTACATGTTTTTTTTCATATGCTTCCAAATGATTCAATAGGGACTATTTGGATATGCTAGTTTTATTTTAGGATTGTATGCTTATTTTATTGTAGCCAAAAGAAGAATTTCTTGCACTCACACTGGAATTCTTCTGTATAATCTTTGTTTACAATGTTGGCACTGGTTGTACAACAAACAGTCATGATTAATTGGTAAAAATCTTTTCTTCGTAAGGTAGCATTTTAGTCAAACTTTCAATTGGTCTTTTGCCATTTCATTGATGATTCGATTGGGGTTGATGCCATCAAGCTGAGGACCACTTTTTAATTTGAGTGATACCAACTTTACCTTTTTGATCCTTGGTGTTCCGATATAGTCAATGAAACTTTCTACACTTTTTATCCAGTTAAGAAAGAAACTAAATTAGTTCCTTGGTTTTTTGTTTACTTATATTCTTCCAGAATAAGTTGGAAGATTTATCTTGTCAGATTTATGCCTCCATCTTTGACCACCAAAATATTGATGATGGCTGTGAGGTTTTTGATTGGATCATGACATGGAGACTGGAATTCATGGTATCTTGGTGGTTGATCTTGTAAAGTAGGGGGGTAATCGTCATCTCTAGAAGAATTAGAGTCACTTCCCAAAATAAGACTAGGAAAATCATGCAAAATATCCATACTGAGGTTGAACATGGACAGGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTCGGGCCCCTGGAAATGTTTCTTTCTGGTTCTTGATGTTGATTTAAGCCTTCTGAAGGAATTCTTACCAGTTCTTGATTGCTTGGATAGTTCTATGAGGGTTTTGTTGTCTTCTTTAATGATGCATACAAGGTTCCCCAAGTTATTGGACTTCTTAATGAGCGTGGACTTGTTTTTGGACTTGAAATTGGTTATTTGATGATTTTCCTATTTCCTAAGTAAGAAGTGCAATCGCTTGCTGCGCTCGCATATGGTGTCATTCATTTCTCCTAAGGTGACTTCAACAGTAGTTAACCTTTGGTTACTCGGGTAGAAGAAGAAGATGCATCCCATCATGAGATGGGGGGTGATTATTTTTGTTGGTATTTTTTCCTTCCATCACTTCACTAGACGCTCTAATTACCAATGAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA

mRNA sequence

ATGCCGTCCAGCAAGGTTCGGAGCCCTTTTTGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGGACTATTTGGATATGCTAGTTTTATTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAGATTTATCTTGTCAGATTTATGCCTCCATCTTTGACCACCAAAATATTGATGATGGCTGTGAGGTTTTTGATTGGATCATGACATGGAGACTGGAATTCATGGTATCTTGGTGGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTCGGGCCCCTGGAAATGTTTCTTTCTGGTTCTTGATGTTGATTTAAGCCTTCTGAAGGAATTCTTACCAGTTCTTGATTGCTTGGATAGTTCTATGAGGGTTTTGTTGTCTTCTTTAATGATGCATACAAGGTTCCCCAAGTTATTGGACTTCTTAATGAGCGTGGACTTTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA

Coding sequence (CDS)

ATGCCGTCCAGCAAGGTTCGGAGCCCTTTTTGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGGACTATTTGGATATGCTAGTTTTATTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAGATTTATCTTGTCAGATTTATGCCTCCATCTTTGACCACCAAAATATTGATGATGGCTGTGAGGTTTTTGATTGGATCATGACATGGAGACTGGAATTCATGGTATCTTGGTGGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTCGGGCCCCTGGAAATGTTTCTTTCTGGTTCTTGATGTTGATTTAAGCCTTCTGAAGGAATTCTTACCAGTTCTTGATTGCTTGGATAGTTCTATGAGGGTTTTGTTGTCTTCTTTAATGATGCATACAAGGTTCCCCAAGTTATTGGACTTCTTAATGAGCGTGGACTTTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA

Protein sequence

MPSSKVRSPFCFGLARTDRLRSMGLFGYASFILGLYAYFINKLEDLSCQIYASIFDHQNIDDGCEVFDWIMTWRLEFMVSWWKLILQLIFMKKFLCSGPWKCFFLVLDVDLSLLKEFLPVLDCLDSSMRVLLSSLMMHTRFPKLLDFLMSVDFVLGECLGQSLS
Homology
[Close]
BLAST of PI0005589 vs. ExPASy TrEMBL
Match: A0A0A0LKL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173030 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39
Identity = 111/205 (54.15%), Postives = 129/205 (62.93%), Query Frame = 0 

Query: 1   MPSSKVRSPFCFGLARTDRLRSM-------------GLFG------YASFILGLYAYFIN 60
           MPSSKV+S FCFGLARTDRLRSM             GL+       YASF+LGLYAYFIN
Sbjct: 1   MPSSKVQSLFCFGLARTDRLRSMVVDFGGLYASFVLGLYASFVLGLYASFVLGLYAYFIN 60

Query: 61  KLEDLSCQIYASIFDHQNIDDGCEVFDWIMTWRLE-----FMVSWWKLILQLIFMKKFLC 120
           KLEDLSCQIY+SIFDHQNI DGCEVFD  M   +E      +V   ++   + F +K   
Sbjct: 61  KLEDLSCQIYSSIFDHQNIGDGCEVFD--MDLEMETGIHGILVVDLEIDSAVDFHEKISL 120

Query: 121 SGPWKCFFLVLDVDLSLLKEFLPVLDCLDSSMRVLLSSLMMHTRFPKLLDFLMS------ 165
            GPWKCFFLVLDVD SLL+E LPVLD L+SSMRVLLS+L      P  + +L++      
Sbjct: 121 LGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSP--IYWLLNEHGLVF 180

[Close]
BLAST of PI0005589 vs. NCBI nr
Match: KGN61584.1 (hypothetical protein Csa_006023 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 8.4e-39
Identity = 111/205 (54.15%), Postives = 129/205 (62.93%), Query Frame = 0 

Query: 1   MPSSKVRSPFCFGLARTDRLRSM-------------GLFG------YASFILGLYAYFIN 60
           MPSSKV+S FCFGLARTDRLRSM             GL+       YASF+LGLYAYFIN
Sbjct: 1   MPSSKVQSLFCFGLARTDRLRSMVVDFGGLYASFVLGLYASFVLGLYASFVLGLYAYFIN 60

Query: 61  KLEDLSCQIYASIFDHQNIDDGCEVFDWIMTWRLE-----FMVSWWKLILQLIFMKKFLC 120
           KLEDLSCQIY+SIFDHQNI DGCEVFD  M   +E      +V   ++   + F +K   
Sbjct: 61  KLEDLSCQIYSSIFDHQNIGDGCEVFD--MDLEMETGIHGILVVDLEIDSAVDFHEKISL 120

Query: 121 SGPWKCFFLVLDVDLSLLKEFLPVLDCLDSSMRVLLSSLMMHTRFPKLLDFLMS------ 165
            GPWKCFFLVLDVD SLL+E LPVLD L+SSMRVLLS+L      P  + +L++      
Sbjct: 121 LGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSP--IYWLLNEHGLVF 180

The following BLAST results are available for this feature:
BLAST of PI0005589 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005589 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKL14.1e-3954.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173030 PE=4 SV=1[more]
BLAST of PI0005589 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61584.18.4e-3954.15hypothetical protein Csa_006023 [Cucumis sativus][more]
BLAST of PI0005589 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005589.1PI0005589.1mRNA