PI0005588 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAGTGCTTCCGGTAAAAGCTGTGATGAGTTTGATCCTTCCTTAGAAGCTGAAGGTCCACCTCCTTTTGGCTGTCAAAGGGGCAACTTCGATCCTGTATACCGTCGGAACATAGAGGAATTCGGATTAATAATGATTGGCCACTTAAAGTAATTTTCTTTTTCGATCTTTTTAAGTTTCAAAATGTTACATATTCGTAGTTGTTCAAGTTTTGATAACGACTCATTTAGCTAGATTCAATAATATTCAGTTTTGGGTTTGTTTCAAGTAGGTTTGAAGGAATATTTATATGCTCAGTAACGTAATTAATGAAGGTATTAAAATTAAGTTGGGGATGTTTCTAATTTTGTTTAGAGCCACGGCAAAGGCGTTAAAGGCGTTAAAGAGACGAGTTATTCCAAGGCCACTTGTGAATATAAGCAGAGAAGAAATAGGAAGGTTTGTGAATGAAGCCGTTGGAGTCCAACTGAAACCTCCGTTCGACGCCTACGCCGGCCCTGACCAGCATGCCATCGCTGCTCAGGGCACCACTTACACTGCTTCTCTCCTCCTAAACGGAGCAATCCCCAGGATGCTCGATCCTGAACTTCGCTCGGTAAACACCGCCCGGCCCTTTAAATTCCTTAATAAATTTACTCTCCCTTTTGGATTCAAGAAATTAAATGATTTTCAATCTTATATATCATCTTGAAAATCTCTTGAAATCATGTAGTTTCTAACAAGTCCTTAGTAATCAACTGAAATTTGATTTCAATTTGGTCAACAGATTTTGATACATTTTTACCATTGAATTTAACAGTTTAATAATAATTAATTAGTTAATAGACATTAACACAATGGCTAAAAGTAGGTAAGTAGTACTGAAAAATCAAGATTAAAAATGGAAATCTAGAAGTCTTATAGAACAAATTAAAATAAACCCAAAACTACCTTTTGAAACTTATTACTAAATAAGAATGAAACTCAATATAATATATATTGAAGAGTAAAAGTAGTGTAATATTTTGAAATATAAAAATTTTCAAATTCTCAAAGGCCATAGACTAAAAAAGTTGAGTGACCAAACTTTGTAACAGAAAGCAAAACTTGAGTGTTAATGTTAATGTTAATGTTAATGTTTGTAGTTGGTTGGAAAACTTCAAGGCATAAGGGCAGGACAAAATGCTGTTTTCCGAGGTCGTCTATACCCAAGAGCGAACGCGAGGGTGGTTCCCTATGAAATAACCGTGGCGGAGTTCACGAACAAGACGGCGGAGTTGGCAAACAGGCTAGCAAAATGTGGCGTAAAAGACGAAGGAATCATTGTTCCTCGGTCGCTCGGGGCAGAGAATCGAACAGACAGCAACATTCTAGCTGCCGATGTTTATTCTCTTATGTATACACGAACGCCACAGGAGGCGTTGCGCATAGTGTATGGATCCGGCAACGAAAGTGTTCCTGGTGGACTTTTTCCCAAGGGTGCTAATGGAAGGATTGCTCAACGCTTCTTGATATAA ATGTGTAGTGCTTCCGGTAAAAGCTGTGATGAGTTTGATCCTTCCTTAGAAGCTGAAGGTCCACCTCCTTTTGGCTGTCAAAGGGGCAACTTCGATCCTGTATACCGTCGGAACATAGAGGAATTCGGATTAATAATGATTGGCCACTTAAAAGCCACGGCAAAGGCGTTAAAGGCGTTAAAGAGACGAGTTATTCCAAGGCCACTTGTGAATATAAGCAGAGAAGAAATAGGAAGGTTTGTGAATGAAGCCGTTGGAGTCCAACTGAAACCTCCGTTCGACGCCTACGCCGGCCCTGACCAGCATGCCATCGCTGCTCAGGGCACCACTTACACTGCTTCTCTCCTCCTAAACGGAGCAATCCCCAGGATGCTCGATCCTGAACTTCGCTCGTTGGTTGGAAAACTTCAAGGCATAAGGGCAGGACAAAATGCTGTTTTCCGAGGTCGTCTATACCCAAGAGCGAACGCGAGGGTGGTTCCCTATGAAATAACCGTGGCGGAGTTCACGAACAAGACGGCGGAGTTGGCAAACAGGCTAGCAAAATGTGGCGTAAAAGACGAAGGAATCATTGTTCCTCGGTCGCTCGGGGCAGAGAATCGAACAGACAGCAACATTCTAGCTGCCGATGTTTATTCTCTTATGTATACACGAACGCCACAGGAGGCGTTGCGCATAGTGTATGGATCCGGCAACGAAAGTGTTCCTGGTGGACTTTTTCCCAAGGGTGCTAATGGAAGGATTGCTCAACGCTTCTTGATATAA ATGTGTAGTGCTTCCGGTAAAAGCTGTGATGAGTTTGATCCTTCCTTAGAAGCTGAAGGTCCACCTCCTTTTGGCTGTCAAAGGGGCAACTTCGATCCTGTATACCGTCGGAACATAGAGGAATTCGGATTAATAATGATTGGCCACTTAAAAGCCACGGCAAAGGCGTTAAAGGCGTTAAAGAGACGAGTTATTCCAAGGCCACTTGTGAATATAAGCAGAGAAGAAATAGGAAGGTTTGTGAATGAAGCCGTTGGAGTCCAACTGAAACCTCCGTTCGACGCCTACGCCGGCCCTGACCAGCATGCCATCGCTGCTCAGGGCACCACTTACACTGCTTCTCTCCTCCTAAACGGAGCAATCCCCAGGATGCTCGATCCTGAACTTCGCTCGTTGGTTGGAAAACTTCAAGGCATAAGGGCAGGACAAAATGCTGTTTTCCGAGGTCGTCTATACCCAAGAGCGAACGCGAGGGTGGTTCCCTATGAAATAACCGTGGCGGAGTTCACGAACAAGACGGCGGAGTTGGCAAACAGGCTAGCAAAATGTGGCGTAAAAGACGAAGGAATCATTGTTCCTCGGTCGCTCGGGGCAGAGAATCGAACAGACAGCAACATTCTAGCTGCCGATGTTTATTCTCTTATGTATACACGAACGCCACAGGAGGCGTTGCGCATAGTGTATGGATCCGGCAACGAAAGTGTTCCTGGTGGACTTTTTCCCAAGGGTGCTAATGGAAGGATTGCTCAACGCTTCTTGATATAA MCSASGKSCDEFDPSLEAEGPPPFGCQRGNFDPVYRRNIEEFGLIMIGHLKATAKALKALKRRVIPRPLVNISREEIGRFVNEAVGVQLKPPFDAYAGPDQHAIAAQGTTYTASLLLNGAIPRMLDPELRSLVGKLQGIRAGQNAVFRGRLYPRANARVVPYEITVAEFTNKTAELANRLAKCGVKDEGIIVPRSLGAENRTDSNILAADVYSLMYTRTPQEALRIVYGSGNESVPGGLFPKGANGRIAQRFLI Homology
BLAST of PI0005588 vs. ExPASy Swiss-Prot
Match: P22242 (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42 Identity = 95/245 (38.78%), Postives = 127/245 (51.84%), Query Frame = 0
BLAST of PI0005588 vs. ExPASy TrEMBL
Match: A0A5D3D2V5 (Desiccation-related protein PCC13-62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00430 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.5e-106 Identity = 198/253 (78.26%), Postives = 217/253 (85.77%), Query Frame = 0
BLAST of PI0005588 vs. ExPASy TrEMBL
Match: A0A1S4DZA6 (desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC107991160 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.8e-106 Identity = 198/253 (78.26%), Postives = 216/253 (85.38%), Query Frame = 0
BLAST of PI0005588 vs. ExPASy TrEMBL
Match: A0A5A7VIT3 (Desiccation-related protein PCC13-62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002040 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.6e-104 Identity = 195/253 (77.08%), Postives = 211/253 (83.40%), Query Frame = 0
BLAST of PI0005588 vs. ExPASy TrEMBL
Match: A0A5A7VN58 (Desiccation-related protein PCC13-62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00350 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 4.5e-69 Identity = 135/249 (54.22%), Postives = 173/249 (69.48%), Query Frame = 0
BLAST of PI0005588 vs. ExPASy TrEMBL
Match: A0A1S3BRA4 (desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC103492837 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 4.5e-69 Identity = 135/249 (54.22%), Postives = 173/249 (69.48%), Query Frame = 0
BLAST of PI0005588 vs. NCBI nr
Match: KAA0068012.1 (desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa] >TYK18115.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]) HSP 1 Score: 394.4 bits (1012), Expect = 7.3e-106 Identity = 198/253 (78.26%), Postives = 217/253 (85.77%), Query Frame = 0
BLAST of PI0005588 vs. NCBI nr
Match: XP_016901050.1 (PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]) HSP 1 Score: 393.3 bits (1009), Expect = 1.6e-105 Identity = 198/253 (78.26%), Postives = 216/253 (85.38%), Query Frame = 0
BLAST of PI0005588 vs. NCBI nr
Match: KAA0068013.1 (desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]) HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103 Identity = 195/253 (77.08%), Postives = 211/253 (83.40%), Query Frame = 0
BLAST of PI0005588 vs. NCBI nr
Match: KAA0068016.1 (desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa] >TYK18112.1 desiccation-related protein PCC13-62-like [Cucumis melo var. makuwa]) HSP 1 Score: 271.2 bits (692), Expect = 9.3e-69 Identity = 135/249 (54.22%), Postives = 173/249 (69.48%), Query Frame = 0
BLAST of PI0005588 vs. NCBI nr
Match: XP_008451604.1 (PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]) HSP 1 Score: 271.2 bits (692), Expect = 9.3e-69 Identity = 135/249 (54.22%), Postives = 173/249 (69.48%), Query Frame = 0
BLAST of PI0005588 vs. TAIR 10
Match: AT3G62730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 223.8 bits (569), Expect = 1.6e-58 Identity = 118/251 (47.01%), Postives = 155/251 (61.75%), Query Frame = 0
BLAST of PI0005588 vs. TAIR 10
Match: AT1G47980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56 Identity = 111/251 (44.22%), Postives = 155/251 (61.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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