PI0005575 (gene) Melon (PI 482460) v1

Overview
NamePI0005575
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionGrowth hormone variant like
Locationchr04: 3620551 .. 3623011 (-)
RNA-Seq ExpressionPI0005575
SyntenyPI0005575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACGAGAATCGGAAGTCCTGTTTCCAAATGCGTAAATTAATAAATCTAAGCTCTCCGCCCATATCAATGGAGGAAGACATCATCCTTCTTCTTTTGTTACCAGCGACGGAGCTCAGCCATGAAAGACGACTACGAGGTATGCGATTTTCTCTCTTTTAAGCCTCGAACTTCAACAACGCACATGTATCAACTCCCTTCCCTCGCAGTTGTTGCTATCAATTATGCGATCTTGCGCTAAAATCTAGGTGCTCAAGTCATCCCTCTCCCTCTCCTGTTCGATTTCGTAGTTGCAATCATCTTAAGGATATTTTCGTGGTTAGCTTAGATATATTAACTTTGTTCTACATCATTCATTGCCTGTTGGAGTTTATGCTATCGTGAATTTGGTGGATTTGGTATTTGGATTAAAACTTAAAGCCTGAGCTGGTATATTAGTTATATATGTTGAACCTTTTTCAGTTTTGCTGAGGAGTTGATACAAGTCGATATTCTTTATTTCCTTTTTCAAAACTCGGAATGAAATGGTCCTTGCTTAAGAAATCGTGAATTACGGTTTTTCTATAGAAGTTTTCGTATCTTTGGATTGGTGATCTTGAGAAACCATATCCACTTCATGTAATGGTGATTAATTGGGTTAGGAAATATCATATGATATTTTCCTTTTGGATTTATTTCACTTCAAAAAGTTCTTTTCTGATTCCTCATATATGTAAATTGCATTTACTAGTTTTGAATCCACATCGATGTCTACTTTGTGTATTGTATTTCCTCATTTTGTTAACTTGATTCCCCATGGATACCTTGTTTGTGTACTTGTAGTTTCTTGTTTTGCTACTTTGTTTCTGCCTGTATTTGTTATGCTTTCTAGTTTCTACAGTTAGATTCACCATTCCTATTTCGGCCTCCAAATTCTTGAAATTCTGTTGGTGCACAGAGGGTGTAGTAGGATTTAAGTTTTGTAGGATGCGGTACATCATGAATCAAAAGGCGAGATAAATCTATATCTTGTTTTGGACCTATCAGCATCAACCTTTCAACCATAAGAAGTCCAGGGTTCACTTTACGGGCAGTAGGTCCCTGGTGTTATGTCTGAGATTGTTTCCAGTCCTAACTGAAGTGTTCATGTGCCACCATGAGTTTTAGATAGGTTTCCTTGCCATCTGTGTTTTCTACCTTTTATGATGTCATTCTGATTATCAAGATGACAATTTGCAGACCGAAGAGAAAAAGCAAGCTGCTGCTGATGTAATGTTTCAATATTCAAATTTGTGATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGTAACTTTTTTTCCTTGGATTTCTCATCTATAATTGTAGAAATCATTTGGTTGAGTTTATCTATAATAGTATATGATGGAATAACTTTAATATTTCATCACCGATTTGTGATTGAACATGGTATTAGAGTAGGAGGTCCTGTATTTAAATCGTCATTTCCTCTTCAACTATTATTGATTTCCACTTGTTTGGTATTTTGTTAGAGCGATGATATAAGATTAAATTTACCTTCACCCATTAGCTTAAGTTTTAGAGTCAATCGGTGATTTAACATGGTATAGAGCAGAAGGTTCTGTGTTCAAACTCTCGTAATGTAATGTATTCCTTCCTAATTAACATTGATTTCTATTTGTTCTGTCTTCTACAAATCTTCAAAGTGAGGGGGAGTGTTATAGTATTGATACAATTAAATCCTATCTAACCAATCAGCTTAAACTTCTGGGTTACTTGATGATTTAACCATGTTTATATGTAATTGTGAATAACACTCGTTTTTTATCAAAAGCTGCACACCTGCTCGCTTTGTTATCCCGTAATTCCTTTGCACTTAAACATATATTTTTATTTCAAAAGAACTATGGGACTTAGACATTCCAATCAATCACCACCTATGTAGATTCATGGGAGTCTTTTCTTTTACACCTGTTAACAAATCAAAATATAAAAGATCATGGTTGTTATGTCTTTCTATGTTCAGGAGATCTCTGGAATACCAACTTCTTTGAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCAGATGCGATGGGCGAATCGTCAAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAGTTCGACGACTCCCAGTTGAAGGCCTTCACTACATATGGGATTTACCTGCCTTGTCTAACCTTCTCTTATTTTGACTCATTATTTGAAATTATCTGCTTGCTGTTTACCAAAAGATGGGAACTTTCACTATTTACATGTATTATTTCCTTGTAAGTTTTGTATGACTTATATGAGTGCATAGGTATATTATGATAGTTATGGACTTATGAGCTGTAGGAAATGGGCCCGGGCCCATCTTATTTCTAATGGGCTTCTCCTGTCTACATATCTAATCTGTTCCAAGTTTGCCTCGGAGGTCGAAAC

mRNA sequence

AGACGAGAATCGGAAGTCCTGTTTCCAAATGCGTAAATTAATAAATCTAAGCTCTCCGCCCATATCAATGGAGGAAGACATCATCCTTCTTCTTTTGTTACCAGCGACGGAGCTCAGCCATGAAAGACGACTACGAGACCGAAGAGAAAAAGCAAGCTGCTGCTGATGTAATGTTTCAATATTCAAATTTGTGATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGAGATCTCTGGAATACCAACTTCTTTGAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCAGATGCGATGGGCGAATCGTCAAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAGTTCGACGACTCCCAGTTGAAGGCCTTCACTACATATGGGATTTACCTGCCTTGTCTAACCTTCTCTTATTTTGACTCATTATTTGAAATTATCTGCTTGCTGTTTACCAAAAGATGGGAACTTTCACTATTTACATGTATTATTTCCTTGTAAGTTTTGTATGACTTATATGAGTGCATAGGTATATTATGATAGTTATGGACTTATGAGCTGTAGGAAATGGGCCCGGGCCCATCTTATTTCTAATGGGCTTCTCCTGTCTACATATCTAATCTGTTCCAAGTTTGCCTCGGAGGTCGAAAC

Coding sequence (CDS)

ATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGAGATCTCTGGAATACCAACTTCTTTGAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCAGATGCGATGGGCGAATCGTCAAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAG

Protein sequence

MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFRVL
Homology
[Close]
BLAST of PI0005575 vs. ExPASy TrEMBL
Match: A0A5A7SN38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001150 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
          VL
Sbjct: 86 VL 87

[Close]
BLAST of PI0005575 vs. ExPASy TrEMBL
Match: A0A1S3B238 (uncharacterized protein LOC103485143 OS=Cucumis melo OX=3656 GN=LOC103485143 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
          VL
Sbjct: 86 VL 87

[Close]
BLAST of PI0005575 vs. ExPASy TrEMBL
Match: A0A0A0KHB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507080 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.2e-25
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGMPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
          VL
Sbjct: 86 VL 87

[Close]
BLAST of PI0005575 vs. ExPASy TrEMBL
Match: A0A6J1KP11 (uncharacterized protein LOC111497388 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111497388 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
           L
Sbjct: 86 AL 87

[Close]
BLAST of PI0005575 vs. ExPASy TrEMBL
Match: A0A6J1EEQ3 (uncharacterized protein LOC111433498 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433498 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
           L
Sbjct: 86 AL 87

[Close]
BLAST of PI0005575 vs. NCBI nr
Match: XP_008440839.1 (PREDICTED: uncharacterized protein LOC103485143 [Cucumis melo] >KAA0025661.1 uncharacterized protein E6C27_scaffold253G001540 [Cucumis melo var. makuwa] >TYK12534.1 uncharacterized protein E5676_scaffold255G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 7.6e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
          VL
Sbjct: 86 VL 87

[Close]
BLAST of PI0005575 vs. NCBI nr
Match: XP_004134854.1 (uncharacterized protein LOC101220806 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGMPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
          VL
Sbjct: 86 VL 87

[Close]
BLAST of PI0005575 vs. NCBI nr
Match: KAE8647611.1 (hypothetical protein Csa_004172 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 38 MACIGNQVRPCDLRFHLMKEISGMPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 97

Query: 61 VL 63
          VL
Sbjct: 98 VL 99

[Close]
BLAST of PI0005575 vs. NCBI nr
Match: XP_038882825.1 (uncharacterized protein LOC120073967 [Benincasa hispida])

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
           L
Sbjct: 86 AL 87

[Close]
BLAST of PI0005575 vs. NCBI nr
Match: XP_022926304.1 (uncharacterized protein LOC111433498 isoform X2 [Cucurbita moschata] >XP_023003947.1 uncharacterized protein LOC111497388 isoform X3 [Cucurbita maxima] >XP_023517285.1 uncharacterized protein LOC111781091 isoform X3 [Cucurbita pepo subsp. pepo] >KAG7026730.1 hypothetical protein SDJN02_10735 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR
Sbjct: 26 MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 85

Query: 61 VL 63
           L
Sbjct: 86 AL 87

[Close]
BLAST of PI0005575 vs. TAIR 10
Match: AT4G35980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 4.2e-21
Identity = 48/62 (77.42%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  MACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFR 60
          MACIGN  RP D+R HLMKEISG+PTSLK   S RAASPD +GESSSSGTARLDK DSFR
Sbjct: 26 MACIGNHTRPTDMRLHLMKEISGMPTSLKGRDSSRAASPDPLGESSSSGTARLDKTDSFR 85

Query: 61 VL 63
           L
Sbjct: 86 AL 87

The following BLAST results are available for this feature:
BLAST of PI0005575 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005575 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SN383.7e-25100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B2383.7e-25100.00uncharacterized protein LOC103485143 OS=Cucumis melo OX=3656 GN=LOC103485143 PE=... [more]
A0A0A0KHB08.2e-2598.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507080 PE=4 SV=1[more]
A0A6J1KP111.1e-2498.39uncharacterized protein LOC111497388 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EEQ31.1e-2498.39uncharacterized protein LOC111433498 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of PI0005575 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440839.17.6e-25100.00PREDICTED: uncharacterized protein LOC103485143 [Cucumis melo] >KAA0025661.1 unc... [more]
XP_004134854.11.7e-2498.39uncharacterized protein LOC101220806 [Cucumis sativus][more]
KAE8647611.11.7e-2498.39hypothetical protein Csa_004172 [Cucumis sativus][more]
XP_038882825.12.2e-2498.39uncharacterized protein LOC120073967 [Benincasa hispida][more]
XP_022926304.12.2e-2498.39uncharacterized protein LOC111433498 isoform X2 [Cucurbita moschata] >XP_0230039... [more]
BLAST of PI0005575 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G35980.14.2e-2177.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..53
NoneNo IPR availablePANTHERPTHR48210FAMILY NOT NAMEDcoord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005575.1PI0005575.1mRNA