PI0005513 (gene) Melon (PI 482460) v1

Overview


Name	PI0005513
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	S-protein homolog
Location	chr05: 16962051 .. 16962420 (-)
RNA-Seq Expression	PI0005513
Synteny	PI0005513

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATCATACAACCAGATAGGTTATACCTGCACGGCGTCGTTTTCGAGGTTCGCGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAGTGATTTGGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCTTTGATGCCTTTAAGGTTCCTAGGGACTTCTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGATTAATTGGAAGAAGGATTTTCAATGGTGA

mRNA sequence

ATGTTCATCATACAACCAGATAGGTTATACCTGCACGGCGTCGTTTTCGAGGTTCGCGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAGTGATTTGGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATCTCTTGTTCCTAGGGACTTCTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGATTAATTGGAAGAAGGATTTTCAATGGTGA

Coding sequence (CDS)

ATGTTCATCATACAACCAGATAGGTTATACCTGCACGGCGTCGTTTTCGAGGTTCGCGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAGTGATTTGGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATCTCTTGTTCCTAGGGACTTCTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGATTAATTGGAAGAAGGATTTTCAATGGTGA

Protein sequence

MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDFQW

Homology

[Close]

BLAST of PI0005513 vs. ExPASy TrEMBL
Match: A0A5D3CZS1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001360 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-54
Identity = 102/123 (82.93%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

[Close]

BLAST of PI0005513 vs. ExPASy TrEMBL
Match: A0A1S4E2Y6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499490 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-54
Identity = 102/123 (82.93%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

[Close]

BLAST of PI0005513 vs. ExPASy TrEMBL
Match: A0A0A0LNI8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53
Identity = 102/123 (82.93%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

[Close]

BLAST of PI0005513 vs. ExPASy TrEMBL
Match: A0A6J1KN10 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111494815 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-50
Identity = 95/123 (77.24%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTT
Sbjct: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81

Query: 61  KLWKSNQSL----------------VPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLW +NQ                  VPRDFYRCG FKKCSWLV EDGFYFSPDE+NWKKD
Sbjct: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141

[Close]

BLAST of PI0005513 vs. ExPASy TrEMBL
Match: A0A6J1HNC1 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111464494 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-50
Identity = 95/123 (77.24%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTT
Sbjct: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81

Query: 61  KLWKSNQSL----------------VPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLW +NQ                  VPRDFYRCG FKKCSWLV EDGFYFSPDE+NWKKD
Sbjct: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141

[Close]

BLAST of PI0005513 vs. NCBI nr
Match: XP_016902587.1 (PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo] >KAA0032040.1 self-incompatibility family protein [Cucumis melo var. makuwa] >TYK16860.1 self-incompatibility family protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.5 bits (563), Expect = 3.5e-54
Identity = 102/123 (82.93%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

[Close]

BLAST of PI0005513 vs. NCBI nr
Match: XP_004139019.1 (S-protein homolog 5 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 5.1e-53
Identity = 102/123 (82.93%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

[Close]

BLAST of PI0005513 vs. NCBI nr
Match: XP_038875976.1 (S-protein homolog 5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52
Identity = 100/123 (81.30%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           MFII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT
Sbjct: 36  MFIIHPDRFYLHDVVFEVRVINGFRNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 95

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWKSNQ                  VPRDFYRCGNFKKCSWLVTEDGFYFSPDE+NWKKD
Sbjct: 96  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKD 155

[Close]

BLAST of PI0005513 vs. NCBI nr
Match: XP_038875011.1 (S-protein homolog 5-like [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 7.4e-52
Identity = 99/123 (80.49%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYL+GVVFEVRVINGFKNNSSLPLVIWCSS+ESDLGGRALQEHDDFSWKVTT
Sbjct: 23  MFIIQPDRLYLYGVVFEVRVINGFKNNSSLPLVIWCSSEESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 108
           KLWK  +                  VPRDFYRCGNFKKCSWLVTEDGFYFSPDE+NWKKD
Sbjct: 83  KLWKRTKFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKD 142

[Close]

BLAST of PI0005513 vs. NCBI nr
Match: KAE8651787.1 (hypothetical protein Csa_006214, partial [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 7.4e-52
Identity = 101/122 (82.79%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQ----------------SLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 107
           KLWKSNQ                  VPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

[Close]

BLAST of PI0005513 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 131.0 bits (328), Expect = 5.9e-31
Identity = 63/122 (51.64%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 3   IIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKL 62
           ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     L
Sbjct: 26  MLQPQTMFL-GEEFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDL 85

Query: 63  W-----------------KSNQSLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDF 108
           W                 +     V RD  RCG+ KKCSW V EDGFYFS DE+ W KDF
Sbjct: 86  WSWMAEYTCTMKWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDF 145

The following BLAST results are available for this feature:

BLAST of PI0005513 vs.


Match Name	E-value	Identity	Description

BLAST of PI0005513 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZS1	1.7e-54	82.93	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001...	[more]
A0A1S4E2Y6	1.7e-54	82.93	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499490 PE=3 SV=1	[more]
A0A0A0LNI8	2.5e-53	82.93	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=3 SV=1	[more]
A0A6J1KN10	2.6e-50	77.24	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111494815 PE=3 SV=1	[more]
A0A6J1HNC1	2.6e-50	77.24	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111464494 PE=3 SV=1	[more]

BLAST of PI0005513 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902587.1	3.5e-54	82.93	PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo] >KAA0032040.1 sel...	[more]
XP_004139019.1	5.1e-53	82.93	S-protein homolog 5 [Cucumis sativus]	[more]
XP_038875976.1	1.5e-52	81.30	S-protein homolog 5-like isoform X1 [Benincasa hispida]	[more]
XP_038875011.1	7.4e-52	80.49	S-protein homolog 5-like [Benincasa hispida]	[more]
KAE8651787.1	7.4e-52	82.79	hypothetical protein Csa_006214, partial [Cucumis sativus]	[more]

BLAST of PI0005513 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24060.1	5.9e-31	51.64	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 18..107 e-value: 3.0E-9 score: 37.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 70..107 coord: 5..67
None	No IPR available	PANTHER	PTHR31232:SF8	BNAA01G23250D PROTEIN	coord: 70..107
None	No IPR available	PANTHER	PTHR31232:SF8	BNAA01G23250D PROTEIN	coord: 5..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005513.1	PI0005513.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane