PI0005481 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGACGGTGAACAGCCACAATTCGAACTTGACCCTGAAATTGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGCAAGAAGAATGGAAAACAATAACAGAAACGCCCCTCCACCGCATGCTGCCCTAGAACCCAATGCCGCCTACATGGCACATGATTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAAACTGTCATGCTTCAGATGATTCAGAACACCAGACAATTCGGCGGTCATCTTGGGGAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTTTGAGGGGTGAGGCGAAGAGGTGGGCCAACGCCTTGGAAGATGACGAGGTGGGAACATGGAACTAA ATGAGTGACGGTGAACAGCCACAATTCGAACTTGACCCTGAAATTGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGCAAGAAGAATGGAAAACAATAACAGAAACGCCCCTCCACCGCATGCTGCCCTAGAACCCAATGCCGCCTACATGGCACATGATTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAAACTGTCATGCTTCAGATGATTCAGAACACCAGACAATTCGGCGGTCATCTTGGGGAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTTTGAGGGGTGAGGCGAAGAGGTGGGCCAACGCCTTGGAAGATGACGAGGTGGGAACATGGAACTAA ATGAGTGACGGTGAACAGCCACAATTCGAACTTGACCCTGAAATTGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGCAAGAAGAATGGAAAACAATAACAGAAACGCCCCTCCACCGCATGCTGCCCTAGAACCCAATGCCGCCTACATGGCACATGATTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAAACTGTCATGCTTCAGATGATTCAGAACACCAGACAATTCGGCGGTCATCTTGGGGAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTTTGAGGGGTGAGGCGAAGAGGTGGGCCAACGCCTTGGAAGATGACGAGGTGGGAACATGGAACTAA MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMENNNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEVGTWN Homology
BLAST of PI0005481 vs. ExPASy TrEMBL
Match: A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 9.9e-33 Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of PI0005481 vs. ExPASy TrEMBL
Match: A0A5A7UDN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00900 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27 Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0
BLAST of PI0005481 vs. ExPASy TrEMBL
Match: A0A5A7TNS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00350 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25 Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of PI0005481 vs. ExPASy TrEMBL
Match: A0A5D3BVN1 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00390 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25 Identity = 62/102 (60.78%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of PI0005481 vs. ExPASy TrEMBL
Match: A0A5A7UXZ2 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00610 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of PI0005481 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 168.3 bits (425), Expect = 5.5e-38 Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 0
BLAST of PI0005481 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida]) HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33 Identity = 80/167 (47.90%), Postives = 113/167 (67.66%), Query Frame = 0
BLAST of PI0005481 vs. NCBI nr
Match: KAA0062403.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK26578.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32 Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of PI0005481 vs. NCBI nr
Match: XP_038880318.1 (uncharacterized protein LOC120071956 [Benincasa hispida]) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27 Identity = 59/104 (56.73%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of PI0005481 vs. NCBI nr
Match: KAA0051815.1 (hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa] >TYK21429.1 hypothetical protein E5676_scaffold609G00900 [Cucumis melo var. makuwa]) HSP 1 Score: 132.9 bits (333), Expect = 2.6e-27 Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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