Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCCAACTAGAATATTGGCCAAGCTTGAAGAAATTGAACGAGGAGGCAGCGCATAGTCGAAAGCAAGCAGGTGACCTAAAATCGGACGGTTTGGTTGAGTCGAAACTTCTGGTCGACGTCTCCAAGCCACTAAATATGTTTGGTGTTAAGTTAGGACGTATGCAGGTGGATATTCAGGCTAGACTTCAAGAAATTGGGTCTTCAATTGGGCCTTCATATGGGACTGCAAATGGGCCTCAGTTGGTGGGTTCTGATGGTCAGTTAAGTGCAATTCAAATTGGGCAGATTGGACTTCATCAAGAGGTAGTGGGCTAGGCCTTGGAAGATTCAGAATGACTATTGAATAAGGCAAAGGTTATTTTTGCAACTTCTCAAGGGCCGAAGGAGGGTGCTTCTCACAGTGATCCAGTGTATATACCATCCAGACAAGAGAGTTTTGAAGGTCGGGAAAAACCGAGGAGTTCTTGGGCCGCTCTCTTTGGGTCCTCATCGGGTAGATCTTTGTTATATACTCCTCCAACTTCGGTGGGGTCAAAAGTGGTTGTTGTTCCATCCGAGGAGGTTATAGCTCAAAGTGTTTGCATGTGGGAAAACTCGTTAGTGGGCCAACTTGTGGATGCTTCGTTACCATTTGCCGTTATTCAACGGCTTATTGAGAAAATTTGGGGGAAAATCGAAATGCCAACCATTACGATTCTTGAGAATGGGCTTATTTGCTTTCAATTTCAGCATCCTAAATCGGTAGAGTGGATTCTATCTCGTGGCCCGTGGGATCTTGGTGGGAAACCCATGCTCCTCTGCAAATGGGTTCCAGGTATTGTCCCTGAAACCTTTGTCTTTAATTCTGTTCCTGTGTGGATCAAACTGGGTTGTATCCCAATGGAGTTGTGGATTGATCAGGTATTGCAGTCATTGCTAGTGCCATTGGTAAACCTCTATCTTTAGATTTGGCCACCAAGAAGAGACGTAAACTGTCGTTTGCTAGGGTGTGTGTTGAATTAGAGGGGGGTGCTAATTTACCTTTTGAGGTCACAGTTAATATGAGAGGTGTGGAATTTATTGTAACAGTTACCTATGAGTGGAAACCCCGTATGTGTAATTCCTGTCATTCGTTTGGTCATCTAGCTGGTAAGTGCCCTCAGAAGGAAACGCCTCAGGTGTAAAAGGAGACGGTTTGTAGCAAGGTAGCTCTTAGTACGAGTGTTGAGCAGGCTATTGTTGCTTGTGGGGAGGTGGTGTTAGAATCCTTTAAGCAGTTAGAGTAAGGTGAGATTTAGGGTTCTCCGATTCGGCAGGTGTCATCGGCCAATAACGATAGGGGTAAGAAGGATGAATACACTCCTGTGACTCGTAAAAGTGGGGTATTGGTTTCAGTGAGAGACATGGTGAAAGGGAAGAGCATGCAGTCTTTGCAGAACTCTTTTGGCAGTATTTCTGATTTGAATGAGGAGGGAAATTACGCGTTGGACTTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGGTGACATGCCTAATTTGAGTCTGTATGGTGGTCCTATGGGGATAATTGTTGACAATACTTCCCATGATTAGTTGGTGTTCGTGGAATATACGAGGTTTAAATTACCCGGTGAAGTGTAGGGCGGTGAGTGATTTTCTGAGGATTTCCTCAGTTGGGTTTTGTTGTCTCCTAGAGACTAGAGTTCGTGAGGGAAATTTATGTTCTGTTTCTGCCCGATTGGGGGACGTTTGGGGTTACTCTTGTAGCTATAGGAGCAACGGTGTGGGTCAGATTTGGGTGATGTGGAAGAAGGATAGGTTTGCTTTTACTCCTAGTGTGGTGGATGAGCAGTTTGTTTCTGTGTGTGCTTTCAGATTTGCATTCTGGTGTGTCTGTGGGGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGACCATAGTGTGCTTTGGCGTCAGTTAGTGGAGACCACTTCTAGATGGTCGATTCCAGGTGTGGTTATGGGTGATTTTAATGCAATTTGGGTGCACTCTGAAGCGTGTGGTAGAAGTCCGGGTACTAGTGATATGGAGGAGTTTGACCTTGCTATTCGTGAAGCTGACTTGGTTGAGCCGTCTGTTCAGGGTAACTGGTTCACTTGGACGAGTAAGGTGCGTGATTCAGGTTGGTTGCGTCGACTTGATCGTATTTTGGTTAATGAGTAGGGGTTAACTGCTTGGCCTAGTTTGCGTGTTTCGGTTCTGCCTTGTGGGATTTCTGATCATTCCCCTATTTTATTCTATCCTGGTGTTGAGCAACGTAGGCATATTATTTCGTTTCGTTTCTTTAAACCATTGGGCGGAGGATACATCTTTTGATGATGTGGTGCCTTCGATTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCTGAATTTGCACGACCTTAAGCTTGTGCTTCGTAGACATTTTGGTAGACATATCATGGGCCTTAGTGAGGAGGTGAGCTCTGCCAAAAAGGCTATGGATAGGGCCCAGCGAGAGGTTAAGCGAGATCCTGGGTCTGTGGAGAGGAGTCGTGTTGCTGGTCTTGTGAGTAAGGGTTTTTGGTCGGCTATCTGTTAGGAAGAAGCCTTTCTCCGTCAGAAATCACGGGTTAGGTGGTTGGAGCTTGGGGATCAAAATTTTACCTTTTTTCATCGTTCGATTTGTTCTCGTATTGGTCGTAATAATCTGCTTTCTGTTGTAGATTCTAAGGGAATTCGGGTGACTTCTCATGAAGGGTTGGTGCAGGTGGCTGTCAATTTTTTTCGTAACAGTCTTGGGTCCCAGGGGGTTGGCTATAGGGAGCTCACTCCATTGATGGAGGAGGTAGTTCAGTTTAGGTGGTCGGAAGAGTGTTGTAGTGCGTTATAGGCTCCTATTAGGCGTGATGAGATCAAGAGGGTGGTTTTTTATATGGATAGTAGTAACGCTCCTGGGCCTGATGGTTTTTCGGCTGGGTTCTTCAAAGGTGCTTGGAATACGGTTGGTGAGGAATTTTGTGATGCTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCCTAGGGTAAATGCTACTGCGATCACCCTCATTCCCAAACATTGTGGGACTGAGCATATGGAACATTATAGGCCTATTTCGTGTTCTAATGTGGTCTATAAGTGCATTTCTAAGATTTTGGTTGATAGACTTCGTGTGTGGCTTCCGTCTTTTATCAGTGGTAATCAGTCTGCCTTTGTTGTGGGGAGGAGTATTGTTGATAACATTCTGCTTTGTCAGGAGCTGGTGGGGGATTATCATGGTTCATTAAAGCCGCCTAGGTGTGCAATGAAAGTGGACCTTCAGAAGGCTTACGATTCGGTGAATTGGGATTTTCTGTTTAGCTTGTTGCTTGCTATAGGCACTCCCTTGCGTTTTGTAAGTCTGATTAGGACGTGTGTTATGTCCCCTATGTTCTCTATCATGGTTAATGGTTCTGTCGAAGGGTTCTTTCTTGGTAGAAAAGGGTTGCTGCAAGGTAACCCTTTATTCCCTTTTTTGTTTGTGATGGTTATGGAGGTGCTCACTCGTCTTTTGAATAGGCCCTCTCTGGATTTTAGGTATCATCATTGTTGTGAGAAGGTTTGTTTGACCCATCTAACCTTCGCTGATGATTTTATGATTTTTTGTTATGCTGATACCACTTCTATTAGCTTTGTGCGCGAGACTCTCCGTCAGTTTGGGGAGTTATCGGGTTGATTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGTAGGGGTTGACAGTGAGACTGCTACTATGTTGGCAGATAGTATGGGTACTCTGCATGTTCGTTACCTGGGTATTCCCTTACTCTCTGATCGGCTGCGTTCTTCGAACTATGCTCCGCTAATCCAGCATATTACAAGTCGGATTCGGTCCTAG
mRNA sequence
ATGGATTCCCAACTAGAATATTGGCCAAGCTTGAAGAAATTGAACGAGGAGGCAGCGCATAGTCGAAAGCAAGCAGGTGACCTAAAATCGGACGGTTTGGTTGAGTCGAAACTTCTGGTCGACGTCTCCAAGCCACTAAATATGTTTGGTGTTAAGTTAGGACGTATGCAGGTGGATATTCAGGCTAGACTTCAAGAAATTGGGTCTTCAATTGGGCCTTCATATGGGACTGCAAATGGGCCTCAGTTGGTGGGTTCTGATGGGCCGAAGGAGGGTGCTTCTCACAGTGATCCAGTGTATATACCATCCAGACAAGAGAGTTTTGAAGGTCGGGAAAAACCGAGGAGTTCTTGGGCCGCTCTCTTTGGGTCCTCATCGGGTAGATCTTTGTTATATACTCCTCCAACTTCGGTGGGGTCAAAAGTGGTTGTTGTTCCATCCGAGGAGGTTATAGCTCAAAGTGTTTGCATGTGGGAAAACTCGTTAGTGGGCCAACTTGTGGATGCTTCGTTACCATTTGCCGTTATTCAACGGCTTATTGAGAAAATTTGGGGGAAAATCGAAATGCCAACCATTACGATTCTTGAGAATGGGCTTATTTGCTTTCAATTTCAGCATCCTAAATCGGTAGAGTGGATTCTATCTCGTGGCCCGTGGGATCTTGGTGGGAAACCCATGCTCCTCTGCAAATGGGTTCCAGGTATTGCAGTCATTGCTAGTGCCATTGGTAAACCTCTATCTTTAGATTTGGCCACCAAGAAGAGACGTAAACTGTCGTTTGCTAGGGTGTGTGTTGAATTAGAGGGGGGTGCTAATTTACCTTTTGAGGTCACAGTTAATATGAGAGGTGTGGAATTTATTGTAACAGTTACCTATGAGTGGAAACCCCGTATGTGTAATTCCTGTCATTCGTTTGGTCATCTAGCTGGTAAGTGCCCTCAGAAGGAAACGCCTCAGGTGTCATCGGCCAATAACGATAGGGGTAAGAAGGATGAATACACTCCTGTGACTCGTAAAAGTGGGGTATTGGTTTCAGTGAGAGACATGGTGAAAGGGAAGAGCATGCAGTCTTTGCAGAACTCTTTTGGCAGTATTTCTGATTTGAATGAGGAGGGAAATTACGCGTTGGACTTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGATTTGCATTCTGGTGTGTCTGTGGGGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGACCATAGTGTGCTTTGGCGTCAGTTAGTGGAGACCACTTCTAGATGGTCGATTCCAGGTGTGGTTATGGGTGATTTTAATGCAATTTGGGTGCACTCTGAAGCGTGTGGTAGAAGTCCGGGTACTAGTGATATGGAGGAGTTTGACCTTGCTATTCGTGAAGCTGACTTGGTTGAGCCGTCTGTTCAGGGTAACTGGTTCACTTGGACGAGTAAGGTGCGTGATTCAGTGAGTCTTATGCTGAATTTGCACGACCTTAAGCTTGTGCTTCGTAGACATTTTGGTAGACATATCATGGGCCTTAGTGAGGAGGTGAGCTCTGCCAAAAAGGCTATGGATAGGGCCCAGCGAGAGGTTAAGCGAGATCCTGGGTCTGTGGAGAGGAGTCGTGTTGCTGGTCTTGTGAATTCTAAGGGAATTCGGGTGACTTCTCATGAAGGGTTGGTGCAGGTGGCTGTCAATTTTTTTCGTAACAGTCTTGGGTCCCAGGGGGTTGGCTATAGGGAGCTCACTCCATTGATGGAGGAGCTTTGTGCGCGAGACTCTCCGTCAGTTTGGGGAGTTATCGGGTTGATTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGTAGGGGTTGACAGTGAGACTGCTACTATGTTGGCAGATAGTATGGGTACTCTGCATGTTCGTTACCTGGGTATTCCCTTACTCTCTGATCGGCTGCGTTCTTCGAACTATGCTCCGCTAATCCAGCATATTACAAGTCGGATTCGGTCCTAG
Coding sequence (CDS)
ATGGATTCCCAACTAGAATATTGGCCAAGCTTGAAGAAATTGAACGAGGAGGCAGCGCATAGTCGAAAGCAAGCAGGTGACCTAAAATCGGACGGTTTGGTTGAGTCGAAACTTCTGGTCGACGTCTCCAAGCCACTAAATATGTTTGGTGTTAAGTTAGGACGTATGCAGGTGGATATTCAGGCTAGACTTCAAGAAATTGGGTCTTCAATTGGGCCTTCATATGGGACTGCAAATGGGCCTCAGTTGGTGGGTTCTGATGGGCCGAAGGAGGGTGCTTCTCACAGTGATCCAGTGTATATACCATCCAGACAAGAGAGTTTTGAAGGTCGGGAAAAACCGAGGAGTTCTTGGGCCGCTCTCTTTGGGTCCTCATCGGGTAGATCTTTGTTATATACTCCTCCAACTTCGGTGGGGTCAAAAGTGGTTGTTGTTCCATCCGAGGAGGTTATAGCTCAAAGTGTTTGCATGTGGGAAAACTCGTTAGTGGGCCAACTTGTGGATGCTTCGTTACCATTTGCCGTTATTCAACGGCTTATTGAGAAAATTTGGGGGAAAATCGAAATGCCAACCATTACGATTCTTGAGAATGGGCTTATTTGCTTTCAATTTCAGCATCCTAAATCGGTAGAGTGGATTCTATCTCGTGGCCCGTGGGATCTTGGTGGGAAACCCATGCTCCTCTGCAAATGGGTTCCAGGTATTGCAGTCATTGCTAGTGCCATTGGTAAACCTCTATCTTTAGATTTGGCCACCAAGAAGAGACGTAAACTGTCGTTTGCTAGGGTGTGTGTTGAATTAGAGGGGGGTGCTAATTTACCTTTTGAGGTCACAGTTAATATGAGAGGTGTGGAATTTATTGTAACAGTTACCTATGAGTGGAAACCCCGTATGTGTAATTCCTGTCATTCGTTTGGTCATCTAGCTGGTAAGTGCCCTCAGAAGGAAACGCCTCAGGTGTCATCGGCCAATAACGATAGGGGTAAGAAGGATGAATACACTCCTGTGACTCGTAAAAGTGGGGTATTGGTTTCAGTGAGAGACATGGTGAAAGGGAAGAGCATGCAGTCTTTGCAGAACTCTTTTGGCAGTATTTCTGATTTGAATGAGGAGGGAAATTACGCGTTGGACTTACGGGTTAGTACGCCTCCACCCTTACAGATTGTGGGCAGTGATGATTTGCATTCTGGTGTGTCTGTGGGGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGACCATAGTGTGCTTTGGCGTCAGTTAGTGGAGACCACTTCTAGATGGTCGATTCCAGGTGTGGTTATGGGTGATTTTAATGCAATTTGGGTGCACTCTGAAGCGTGTGGTAGAAGTCCGGGTACTAGTGATATGGAGGAGTTTGACCTTGCTATTCGTGAAGCTGACTTGGTTGAGCCGTCTGTTCAGGGTAACTGGTTCACTTGGACGAGTAAGGTGCGTGATTCAGTGAGTCTTATGCTGAATTTGCACGACCTTAAGCTTGTGCTTCGTAGACATTTTGGTAGACATATCATGGGCCTTAGTGAGGAGGTGAGCTCTGCCAAAAAGGCTATGGATAGGGCCCAGCGAGAGGTTAAGCGAGATCCTGGGTCTGTGGAGAGGAGTCGTGTTGCTGGTCTTGTGAATTCTAAGGGAATTCGGGTGACTTCTCATGAAGGGTTGGTGCAGGTGGCTGTCAATTTTTTTCGTAACAGTCTTGGGTCCCAGGGGGTTGGCTATAGGGAGCTCACTCCATTGATGGAGGAGCTTTGTGCGCGAGACTCTCCGTCAGTTTGGGGAGTTATCGGGTTGATTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGTAGGGGTTGACAGTGAGACTGCTACTATGTTGGCAGATAGTATGGGTACTCTGCATGTTCGTTACCTGGGTATTCCCTTACTCTCTGATCGGCTGCGTTCTTCGAACTATGCTCCGCTAATCCAGCATATTACAAGTCGGATTCGGTCCTAG
Protein sequence
MDSQLEYWPSLKKLNEEAAHSRKQAGDLKSDGLVESKLLVDVSKPLNMFGVKLGRMQVDIQARLQEIGSSIGPSYGTANGPQLVGSDGPKEGASHSDPVYIPSRQESFEGREKPRSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFAVIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPGIAVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKCPQKETPQVSSANNDRGKKDEYTPVTRKSGVLVSVRDMVKGKSMQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSGVSVGVFCVYASNSNVDHSVLWRQLVETTSRWSIPGVVMGDFNAIWVHSEACGRSPGTSDMEEFDLAIREADLVEPSVQGNWFTWTSKVRDSVSLMLNLHDLKLVLRRHFGRHIMGLSEEVSSAKKAMDRAQREVKRDPGSVERSRVAGLVNSKGIRVTSHEGLVQVAVNFFRNSLGSQGVGYRELTPLMEELCARDSPSVWGVIGLIANLGKSSMFVVGVDSETATMLADSMGTLHVRYLGIPLLSDRLRSSNYAPLIQHITSRIRS
Homology
BLAST of PI0005363 vs. ExPASy TrEMBL
Match:
A0A1S3CJ11 (uncharacterized protein LOC103501395 OS=Cucumis melo OX=3656 GN=LOC103501395 PE=4 SV=1)
HSP 1 Score: 432.2 bits (1110), Expect = 4.0e-117
Identity = 273/634 (43.06%), Postives = 342/634 (53.94%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P EEVI Q + +WENSLVGQL+D+ LP+
Sbjct: 111 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYT 170
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 171 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 230
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 231 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 290
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 291 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 350
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 351 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 410
Query: 415 SVRDMVKGKSMQSLQNS---FGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSGVSVG 474
SVRD +GKSM+ + + G S + +G L+ S D +S VG
Sbjct: 411 SVRD--RGKSMEVDEGTDILNGVSSSIGPKGLPTLN------------NSHDYYSNSGVG 470
Query: 475 -VFCVYASNS-NVDHSVLWRQL--VETTSRWSIPGVVMGDFNAIWVHSEACGRSPGTSDM 534
++ ++ N + +V+ Q VE TS WS PGVVMGDFNAI V+SEA G SP +M
Sbjct: 471 RIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDFNAIRVYSEAFGGSPIQGEM 530
Query: 535 EEFDLAIREADLVEPSVQGNWFTWTSK-----------------------------VRDS 590
E+FDLAIR+ DLVEP VQGN F SK V
Sbjct: 531 EDFDLAIRDVDLVEPLVQGNCFQLNSKVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPL 590
BLAST of PI0005363 vs. ExPASy TrEMBL
Match:
A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-106
Identity = 248/556 (44.60%), Postives = 301/556 (54.14%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P EEVI Q + +WENSLVGQL+D+ LP+
Sbjct: 293 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYT 352
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 353 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 412
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 413 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 472
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 473 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 532
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 533 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 592
Query: 415 SVRDMVKGKSMQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSG------- 474
SVRD K S LQ G+ + +D S+ + + G
Sbjct: 593 SVRDRGKKGSPPPLQVDEGTDILNGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSK 652
Query: 475 ---VSVGVFCVYASNSNVDHS-VLWRQ-----LVETTSRWSIPGVVMGDFNAIWVHSEAC 534
S C Y SNS V V+W++ I GVVMGDFNAI V+SEA
Sbjct: 653 RFSNSWDYSCSY-SNSGVGRIWVMWKKNRFSFSTNVMDEQFITGVVMGDFNAIRVYSEAF 712
Query: 535 GRSPGTSDMEEFDLAIREADLVEPSVQGNWFTWTSKVR---------------------- 547
G SP +ME+FDLAIR+ DLVEP VQGNWFTWTSKV+
Sbjct: 713 GGSPIQGEMEDFDLAIRDVDLVEPLVQGNWFTWTSKVQGFQLNSKVVSFRFFNHWVEDPS 772
BLAST of PI0005363 vs. ExPASy TrEMBL
Match:
A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1)
HSP 1 Score: 394.4 bits (1012), Expect = 9.2e-106
Identity = 249/557 (44.70%), Postives = 302/557 (54.22%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P E+VI Q + +WENSLVGQL+D+ LP+
Sbjct: 293 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYT 352
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 353 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 412
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 413 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 472
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 473 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 532
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 533 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 592
Query: 415 SVRDMVKGKSMQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSG------- 474
SVRD K S LQ G+ + +D S+ + + G
Sbjct: 593 SVRDRGKKGSPPPLQVDEGTDILNGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSK 652
Query: 475 ---VSVGVFCVYASNSNVDHS-VLWRQ---------------LVETTSRWSIPGVVMGDF 534
S C Y SNS V V+W++ VE TS WS PGVVMGDF
Sbjct: 653 RFSNSWDYSCSY-SNSGVGRIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDF 712
Query: 535 NAIWVHSEACGRSPGTSDMEEFDLAIREADLVEPSVQGNWFTWTSK-------------- 547
NAI V+SEA G SP +ME+FDLAIR+ DLVEP VQGN F SK
Sbjct: 713 NAIRVYSEAFGGSPIQGEMEDFDLAIRDVDLVEPLVQGNCFQLNSKVVSFRFFNHWVEDP 772
BLAST of PI0005363 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 383.3 bits (983), Expect = 2.1e-102
Identity = 252/665 (37.89%), Postives = 316/665 (47.52%), Query Frame = 0
Query: 189 MPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPGI------------- 248
MPTITILEN LICFQF+ P SVEWILSRGPW LGGKPMLL KW GI
Sbjct: 1 MPTITILENDLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVW 60
Query: 249 ----------------AVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTV 308
A++AS +GKP++LDLATK+ +LS+ARVCV+LEG N+ E+TV
Sbjct: 61 IRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITV 120
Query: 309 NMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKCP-------------------------- 368
N+RGV+F V+V YEWKP+ CN C + GH GKCP
Sbjct: 121 NLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDS 180
Query: 369 ------------QKETPQVSSANN--------DRGKKDEYTPVTRKSGVLVSVRDMVKGK 428
Q E ++ S+ N + GK+DE+T VTRK LVSVRD +GK
Sbjct: 181 EPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSVRD--RGK 240
Query: 429 S-MQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQI------------------VGSD-- 488
S + ++ NSFGS+ ++ + +AL + +PPPLQ+ +GS
Sbjct: 241 SIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSV 300
Query: 489 ------------------------------------------------------------ 548
Sbjct: 301 GFCCLLETRVRESNFDYVSRRFGNSWDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQF 360
Query: 549 ------DLHSGVSVGVFCVYASNSNVDHSVLWRQLVETTSRWSIPGVVMGDFNAIWVHSE 590
DL SGV V VFCVYASNSN++ +LWR+LVE TS WS P VVMGDFNAI VH E
Sbjct: 361 VTGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFE 420
BLAST of PI0005363 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 5.9e-04
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query: 617 VDSETATMLADSM----GTLHVRYLGIPLLSDRLRSSNYAPLIQHITSRIRS 665
+ +E A+ LA SM G L VRYLG+PLL+ RLRS++ APLIQ ITSRIRS
Sbjct: 902 LSNEAASHLAASMGFVLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSRIRS 953
HSP 2 Score: 344.4 bits (882), Expect = 1.1e-90
Identity = 240/675 (35.56%), Postives = 301/675 (44.59%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SL YTPP ++G K+VV+P EEVI Q + +WENSLVGQL+DA LP+A
Sbjct: 191 KSTWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYA 250
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQRL
Sbjct: 251 VIQRL------------------------------------------------------- 310
Query: 235 IAVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTVNMRGVEFIVTVTYEW 294
KP+SLD ATKKRR+LS+ARVCVELEGG+N+ E+TV++RGV+F V+V YEW
Sbjct: 311 ---------KPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEW 370
Query: 295 KPRMCNSCHSFGHLAGKC---------------------------------PQKETPQVS 354
KPR CN C +FGH + KC Q E ++
Sbjct: 371 KPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQVEKGEIR 430
Query: 355 SANNDR--------GKKDEYTPVTRKSGVLVSVRDMVKGKSMQSLQ-NSFGSISDLNEEG 414
S+ N GK DE+T VTRK LVS+RD +GKSM+ + NSFGS+ ++ +
Sbjct: 431 SSPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRD--RGKSMEVIMPNSFGSLLEVGDAD 490
Query: 415 NYALDLRVSTPPPLQI-VGSD--------------------------------------- 474
+AL + + PPLQ+ G+D
Sbjct: 491 KWALSIIEGSSPPLQVDEGTDVLSGISSSIVGFCCLLETRVREGNFDSVSRRFSNSWDYS 550
Query: 475 -------------------------------------DLHSGVSVGVFCVYASNSNVDHS 534
DL SGV V VFCVYASNSN++
Sbjct: 551 CSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERR 610
Query: 535 VLWRQLVETTSRWSIPGVVMGDFNAIWVHSEACGRSPGTSDMEEFDLAIREADLVEPSVQ 590
+LW +LVE TS WS PGVVM DFNAI VHSEA SP +ME+F+LAIR+ADLVEPSVQ
Sbjct: 611 LLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPIQGEMEDFNLAIRDADLVEPSVQ 670
BLAST of PI0005363 vs. NCBI nr
Match:
XP_008463187.1 (PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo])
HSP 1 Score: 432.2 bits (1110), Expect = 8.2e-117
Identity = 273/634 (43.06%), Postives = 342/634 (53.94%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P EEVI Q + +WENSLVGQL+D+ LP+
Sbjct: 111 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYT 170
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 171 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 230
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 231 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 290
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 291 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 350
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 351 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 410
Query: 415 SVRDMVKGKSMQSLQNS---FGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSGVSVG 474
SVRD +GKSM+ + + G S + +G L+ S D +S VG
Sbjct: 411 SVRD--RGKSMEVDEGTDILNGVSSSIGPKGLPTLN------------NSHDYYSNSGVG 470
Query: 475 -VFCVYASNS-NVDHSVLWRQL--VETTSRWSIPGVVMGDFNAIWVHSEACGRSPGTSDM 534
++ ++ N + +V+ Q VE TS WS PGVVMGDFNAI V+SEA G SP +M
Sbjct: 471 RIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDFNAIRVYSEAFGGSPIQGEM 530
Query: 535 EEFDLAIREADLVEPSVQGNWFTWTSK-----------------------------VRDS 590
E+FDLAIR+ DLVEP VQGN F SK V
Sbjct: 531 EDFDLAIRDVDLVEPLVQGNCFQLNSKVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPL 590
BLAST of PI0005363 vs. NCBI nr
Match:
TYK18951.1 (uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa])
HSP 1 Score: 396.4 bits (1017), Expect = 5.0e-106
Identity = 248/556 (44.60%), Postives = 301/556 (54.14%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P EEVI Q + +WENSLVGQL+D+ LP+
Sbjct: 293 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYT 352
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 353 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 412
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 413 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 472
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 473 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 532
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 533 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 592
Query: 415 SVRDMVKGKSMQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSG------- 474
SVRD K S LQ G+ + +D S+ + + G
Sbjct: 593 SVRDRGKKGSPPPLQVDEGTDILNGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSK 652
Query: 475 ---VSVGVFCVYASNSNVDHS-VLWRQ-----LVETTSRWSIPGVVMGDFNAIWVHSEAC 534
S C Y SNS V V+W++ I GVVMGDFNAI V+SEA
Sbjct: 653 RFSNSWDYSCSY-SNSGVGRIWVMWKKNRFSFSTNVMDEQFITGVVMGDFNAIRVYSEAF 712
Query: 535 GRSPGTSDMEEFDLAIREADLVEPSVQGNWFTWTSKVR---------------------- 547
G SP +ME+FDLAIR+ DLVEP VQGNWFTWTSKV+
Sbjct: 713 GGSPIQGEMEDFDLAIRDVDLVEPLVQGNWFTWTSKVQGFQLNSKVVSFRFFNHWVEDPS 772
BLAST of PI0005363 vs. NCBI nr
Match:
KAA0046247.1 (uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa])
HSP 1 Score: 394.4 bits (1012), Expect = 1.9e-105
Identity = 249/557 (44.70%), Postives = 302/557 (54.22%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SLLYT P +G K+VV P E+VI Q + +WENSLVGQL+D+ LP+
Sbjct: 293 KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYT 352
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQ L+EKIWGKIEMP ITILEN LICFQF+ KSVEWILSRGPW L K MLL KW PG
Sbjct: 353 VIQHLVEKIWGKIEMPIITILENDLICFQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPG 412
Query: 235 I-----------------------------AVIASAIGKPLSLDLATKKRRKLSFARVCV 294
I AV+ASA+GKP+SLDLATK+RR+LS+ARVCV
Sbjct: 413 IVPEFFVFNSVPVWIRLGKLPMELWTEAGLAVVASAVGKPISLDLATKERRRLSYARVCV 472
Query: 295 ELEGGANLPFEVTVNMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKC------------- 354
ELE G+N+P E+TV++RGV+F V+V YEWKPR CN C +FGH C
Sbjct: 473 ELEAGSNMPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEV 532
Query: 355 --------------------PQKETPQVSSANNDR--------GKKDEYTPVTRKSGVLV 414
Q E ++ ++ N GK DE+T VTR+ LV
Sbjct: 533 VHKGDDVDSEPCGEVVLESFKQLEEGEIRNSPNRHNSQVEKGVGKSDEFTLVTRRKSELV 592
Query: 415 SVRDMVKGKSMQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQIVGSDDLHSG------- 474
SVRD K S LQ G+ + +D S+ + + G
Sbjct: 593 SVRDRGKKGSPPPLQVDEGTDILNGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSK 652
Query: 475 ---VSVGVFCVYASNSNVDHS-VLWRQ---------------LVETTSRWSIPGVVMGDF 534
S C Y SNS V V+W++ VE TS WS PGVVMGDF
Sbjct: 653 RFSNSWDYSCSY-SNSGVGRIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDF 712
Query: 535 NAIWVHSEACGRSPGTSDMEEFDLAIREADLVEPSVQGNWFTWTSK-------------- 547
NAI V+SEA G SP +ME+FDLAIR+ DLVEP VQGN F SK
Sbjct: 713 NAIRVYSEAFGGSPIQGEMEDFDLAIRDVDLVEPLVQGNCFQLNSKVVSFRFFNHWVEDP 772
BLAST of PI0005363 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 383.3 bits (983), Expect = 4.4e-102
Identity = 252/665 (37.89%), Postives = 316/665 (47.52%), Query Frame = 0
Query: 189 MPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPGI------------- 248
MPTITILEN LICFQF+ P SVEWILSRGPW LGGKPMLL KW GI
Sbjct: 1 MPTITILENDLICFQFRRPNSVEWILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVW 60
Query: 249 ----------------AVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTV 308
A++AS +GKP++LDLATK+ +LS+ARVCV+LEG N+ E+TV
Sbjct: 61 IRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITV 120
Query: 309 NMRGVEFIVTVTYEWKPRMCNSCHSFGHLAGKCP-------------------------- 368
N+RGV+F V+V YEWKP+ CN C + GH GKCP
Sbjct: 121 NLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDS 180
Query: 369 ------------QKETPQVSSANN--------DRGKKDEYTPVTRKSGVLVSVRDMVKGK 428
Q E ++ S+ N + GK+DE+T VTRK LVSVRD +GK
Sbjct: 181 EPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSVRD--RGK 240
Query: 429 S-MQSLQNSFGSISDLNEEGNYALDLRVSTPPPLQI------------------VGSD-- 488
S + ++ NSFGS+ ++ + +AL + +PPPLQ+ +GS
Sbjct: 241 SIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSV 300
Query: 489 ------------------------------------------------------------ 548
Sbjct: 301 GFCCLLETRVRESNFDYVSRRFGNSWDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQF 360
Query: 549 ------DLHSGVSVGVFCVYASNSNVDHSVLWRQLVETTSRWSIPGVVMGDFNAIWVHSE 590
DL SGV V VFCVYASNSN++ +LWR+LVE TS WS P VVMGDFNAI VH E
Sbjct: 361 VTGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFE 420
BLAST of PI0005363 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 56.2 bits (134), Expect = 1.2e-03
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query: 617 VDSETATMLADSM----GTLHVRYLGIPLLSDRLRSSNYAPLIQHITSRIRS 665
+ +E A+ LA SM G L VRYLG+PLL+ RLRS++ APLIQ ITSRIRS
Sbjct: 902 LSNEAASHLAASMGFVLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSRIRS 953
HSP 2 Score: 344.4 bits (882), Expect = 2.3e-90
Identity = 240/675 (35.56%), Postives = 301/675 (44.59%), Query Frame = 0
Query: 115 RSSWAALFGSSSGRSLLYTPPTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFA 174
+S+WA+LFG+SS SL YTPP ++G K+VV+P EEVI Q + +WENSLVGQL+DA LP+A
Sbjct: 191 KSTWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYA 250
Query: 175 VIQRLIEKIWGKIEMPTITILENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKWVPG 234
VIQRL
Sbjct: 251 VIQRL------------------------------------------------------- 310
Query: 235 IAVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTVNMRGVEFIVTVTYEW 294
KP+SLD ATKKRR+LS+ARVCVELEGG+N+ E+TV++RGV+F V+V YEW
Sbjct: 311 ---------KPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEW 370
Query: 295 KPRMCNSCHSFGHLAGKC---------------------------------PQKETPQVS 354
KPR CN C +FGH + KC Q E ++
Sbjct: 371 KPRKCNLCCAFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQVEKGEIR 430
Query: 355 SANNDR--------GKKDEYTPVTRKSGVLVSVRDMVKGKSMQSLQ-NSFGSISDLNEEG 414
S+ N GK DE+T VTRK LVS+RD +GKSM+ + NSFGS+ ++ +
Sbjct: 431 SSPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRD--RGKSMEVIMPNSFGSLLEVGDAD 490
Query: 415 NYALDLRVSTPPPLQI-VGSD--------------------------------------- 474
+AL + + PPLQ+ G+D
Sbjct: 491 KWALSIIEGSSPPLQVDEGTDVLSGISSSIVGFCCLLETRVREGNFDSVSRRFSNSWDYS 550
Query: 475 -------------------------------------DLHSGVSVGVFCVYASNSNVDHS 534
DL SGV V VFCVYASNSN++
Sbjct: 551 CSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERR 610
Query: 535 VLWRQLVETTSRWSIPGVVMGDFNAIWVHSEACGRSPGTSDMEEFDLAIREADLVEPSVQ 590
+LW +LVE TS WS PGVVM DFNAI VHSEA SP +ME+F+LAIR+ADLVEPSVQ
Sbjct: 611 LLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPIQGEMEDFNLAIRDADLVEPSVQ 670
BLAST of PI0005363 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 79.3 bits (194), Expect = 1.3e-14
Identity = 52/217 (23.96%), Postives = 96/217 (44.24%), Query Frame = 0
Query: 135 PTSVGSKVVVVPSEEVIAQSVCMWENSLVGQLVDASLPFAVIQRLIEKIWGKIEMPTITI 194
P + V+ EEV+ +W+ ++ +++ + +P +V+ R + ++W + T+
Sbjct: 54 PDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMD 113
Query: 195 LENGLICFQFQHPKSVEWILSRGPWDLGGKPMLLCKW----------------------V 254
L +F+ + L+ GPW + G +L+ W +
Sbjct: 114 LPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNI 173
Query: 255 PG-------IAVIASAIGKPLSLDLATKKRRKLSFARVCVELEGGANLPFEVTVNMRGVE 314
P + IA +G+PL +D+ T K FARVC+E+ P + TV + G
Sbjct: 174 PYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEV--NLAKPLKGTVLINGDR 233
Query: 315 FIVTVTYEWKPRMCNSCHSFGHLAGKCPQKETPQVSS 323
+ V YE ++C+SC +GHL CP+ +VS+
Sbjct: 234 YF--VAYEGLSKICSSCGIYGHLVHSCPRNVVVKVSA 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CJ11 | 4.0e-117 | 43.06 | uncharacterized protein LOC103501395 OS=Cucumis melo OX=3656 GN=LOC103501395 PE=... | [more] |
A0A5D3D5X6 | 2.4e-106 | 44.60 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7TWG5 | 9.2e-106 | 44.70 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7V5J2 | 2.1e-102 | 37.89 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
A0A5A7V5J2 | 5.9e-04 | 61.54 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
Pages
Match Name | E-value | Identity | Description | |
XP_008463187.1 | 8.2e-117 | 43.06 | PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo] | [more] |
TYK18951.1 | 5.0e-106 | 44.60 | uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa] | [more] |
KAA0046247.1 | 1.9e-105 | 44.70 | uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa] | [more] |
KAA0062888.1 | 4.4e-102 | 37.89 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
KAA0062888.1 | 1.2e-03 | 61.54 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
Pages
Match Name | E-value | Identity | Description | |
AT2G01050.1 | 1.3e-14 | 23.96 | zinc ion binding;nucleic acid binding | [more] |