PI0005354 (gene) Melon (PI 482460) v1

Overview


Name	PI0005354
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Lipoxygenase
Location	chr05: 22373258 .. 22374012 (-)
RNA-Seq Expression	PI0005354
Synteny	PI0005354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAAGAAAAACAGATTCACAAGGTCGTGAGGTTCTTGAGTTGACCATCAAGGACTACCCTTTTGCAAATGACGGTCTCTTATTATGGAATGCCCTATTGAAATGGGTGACAAAATATGTGAACTACTATTATACAGATGACAATGCAGTAGTGAATGATACAGAGCTACATGCTTGGTGGAAAGAAATTCAGGAAAAAGGGCACCCAGATAGAAAGGAAGGATGGCTTACATTAAATACCCGAAACAATCTCATTAAGATTGCATCAACCATAGCATGGGTAGGAAGTGGGCACCACGCATCTGTCAACTTCCTTCATATGCATATGGAGGCTATATTCCCAACCGACCCAGTATTGCAAGGACCAACATGCTCACAGAGAACAATGGTGACAAATTTTTAAAAGACTTCATAAACCATCCTGAAAAGAAGTTGCATGAACTCTTTCCTTCAGATGCTCAAGCTGACATAGTGAAAAAGACTATGTTTTTGTTGTCAATTCATTCTCCTGATGAGGAGTACATTGGGGATGCTATAGAGCCAGCTTGGGCTCTCGAGCCCTCCATAAGTGATGCCTTCGAAGAGTTTAAAGCCAACTTGAAGGATCTAGAAAAGGAGATTGACAAACTTAATGAGAATAAAGATTTGAAGAATAGGTATGGAGCTGGGATTATACCTTACGAAGTTATGAAACCACATTCAAAGCCTGGGATCACTGGAAGTGGAGTTCCATACAGCGTCTCCATTTAA

mRNA sequence

ATGGCGAAAAGAAAAACAGATTCACAAGGTCGTGAGCCCTCCATAAGTGATGCCTTCGAAGAGTTTAAAGCCAACTTGAAGGATCTAGAAAAGGAGATTGACAAACTTAATGAGAATAAAGATTTGAAGAATAGGTATGGAGCTGGGATTATACCTTACGAAGTTATGAAACCACATTCAAAGCCTGGGATCACTGGAAGTGGAGTTCCATACAGCGTCTCCATTTAA

Coding sequence (CDS)

ATGGCGAAAAGAAAAACAGATTCACAAGGTCGTGAGCCCTCCATAAGTGATGCCTTCGAAGAGTTTAAAGCCAACTTGAAGGATCTAGAAAAGGAGATTGACAAACTTAATGAGAATAAAGATTTGAAGAATAGGTATGGAGCTGGGATTATACCTTACGAAGTTATGAAACCACATTCAAAGCCTGGGATCACTGGAAGTGGAGTTCCATACAGCGTCTCCATTTAA

Protein sequence

MAKRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPYSVSI

Homology

[Close]

BLAST of PI0005354 vs. ExPASy Swiss-Prot
Match: O24370 (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.5e-14
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +P I+ AFE F   LK+LE  ID  N +  L NR GAG++PYE++KP+S+PG+TG GVPY
Sbjct: 836 DPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPY 895

Query: 72  SVSI 76
           S+SI
Sbjct: 896 SISI 899

[Close]

BLAST of PI0005354 vs. ExPASy Swiss-Prot
Match: Q8GSM2 (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-13
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           EP +  AFE+F   LK+ E  ID  N N + KNR GAGI+PYE++KP S+PG+TG G+P 
Sbjct: 833 EPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPN 892

Query: 72  SVSI 76
           S+SI
Sbjct: 893 SISI 896

[Close]

BLAST of PI0005354 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.4e-13
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 1   MAKRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHS 60
           + +++  S   EP I+ AFE FK  L+ LE  ID+ N N  LKNR GAG++ YE++KP S
Sbjct: 822 IGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTS 881

Query: 61  KPGITGSGVPYSVSI 76
           + G+TG GVPYS+SI
Sbjct: 882 EHGVTGMGVPYSISI 896

[Close]

BLAST of PI0005354 vs. ExPASy Swiss-Prot
Match: R9WS04 (Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.1e-12
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           EP+I  AFEEF   LK L+  ID  N +  L+NR GAG++ Y+++KP S  G+TG GVPY
Sbjct: 836 EPAIKSAFEEFCGRLKKLDDIIDSRNRDPILRNRTGAGLVQYQLLKPFSGHGVTGKGVPY 895

Query: 72  SVSI 76
           S+SI
Sbjct: 896 SISI 899

[Close]

BLAST of PI0005354 vs. ExPASy Swiss-Prot
Match: R9WTS6 (Lipoxygenase 1, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-11
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 3   KRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKP 62
           +++TD+   +  I +AF  F A ++ +EKEI+K N +  LKNR GAG++PYE++ P S P
Sbjct: 835 RQQTDTWSGDAEIVEAFYAFSAEIQRIEKEIEKRNSDTSLKNRCGAGVLPYELLAPSSGP 894

Query: 63  GITGSGVPYSVSI 76
           G T  GVP S+SI
Sbjct: 895 GATCRGVPNSISI 907

[Close]

BLAST of PI0005354 vs. ExPASy TrEMBL
Match: A0A5D3DDH6 (Lipoxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00060 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.0e-22
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 189 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 248

Query: 72  SVSI 76
           SVSI
Sbjct: 249 SVSI 252

[Close]

BLAST of PI0005354 vs. ExPASy TrEMBL
Match: A0A5A7TDY8 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00180 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.0e-22
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 748 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 807

Query: 72  SVSI 76
           SVSI
Sbjct: 808 SVSI 811

[Close]

BLAST of PI0005354 vs. ExPASy TrEMBL
Match: A0A1S3BNU6 (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.0e-22
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 536 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 595

Query: 72  SVSI 76
           SVSI
Sbjct: 596 SVSI 599

[Close]

BLAST of PI0005354 vs. ExPASy TrEMBL
Match: A0A0A0KWY1 (Lipoxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G287030 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 1  MAKRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHS 60
          MA+ K D++  EP IS AFE FKA L DLEK I++LNENKDLKNR GAGIIPYE MKP S
Sbjct: 1  MAETKKDAECHEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRS 60

Query: 61 KPGITGSGVPYSVSI 76
          KPGITGSGVPYSVSI
Sbjct: 61 KPGITGSGVPYSVSI 75

[Close]

BLAST of PI0005354 vs. ExPASy TrEMBL
Match: A0A0A0KZ93 (Lipoxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G287560 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           + SIS AFE+FKANL DLEK+ID+LNENKDLKNRYGAGIIPYEVMKP SKPG+TG GVPY
Sbjct: 78  QKSISKAFEKFKANLTDLEKKIDELNENKDLKNRYGAGIIPYEVMKPRSKPGVTGIGVPY 137

Query: 72  SVSI 76
           SVSI
Sbjct: 138 SVSI 141

[Close]

BLAST of PI0005354 vs. NCBI nr
Match: TYK21644.1 (lipoxygenase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 189 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 248

Query: 72  SVSI 76
           SVSI
Sbjct: 249 SVSI 252

[Close]

BLAST of PI0005354 vs. NCBI nr
Match: XP_008449947.1 (PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 536 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 595

Query: 72  SVSI 76
           SVSI
Sbjct: 596 SVSI 599

[Close]

BLAST of PI0005354 vs. NCBI nr
Match: KAA0041373.1 (lipoxygenase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL  LEK+ID+LN+NKDLKNRYGAGIIPYEVMKP SKPGITGSGVPY
Sbjct: 748 DPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYGAGIIPYEVMKPRSKPGITGSGVPY 807

Query: 72  SVSI 76
           SVSI
Sbjct: 808 SVSI 811

[Close]

BLAST of PI0005354 vs. NCBI nr
Match: XP_004142238.3 (lipoxygenase 2, chloroplastic [Cucumis sativus] >KAE8649494.1 hypothetical protein Csa_017907 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +PSIS+AFE+FKANL DLEK+ID+LN+NKDLKNRYGA IIPYE MKP SKPGITGSGVPY
Sbjct: 760 DPSISNAFEKFKANLTDLEKKIDELNQNKDLKNRYGAAIIPYEAMKPRSKPGITGSGVPY 819

Query: 72  SVSI 76
           SVSI
Sbjct: 820 SVSI 823

[Close]

BLAST of PI0005354 vs. NCBI nr
Match: KGN54487.2 (hypothetical protein Csa_017864 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 3.1e-20
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           + SIS AFE+FKA L DLEK+ID+LNENKDLKNRYGAGIIPYEVMKP SKPG+TG GVPY
Sbjct: 721 DQSISKAFEKFKAKLTDLEKKIDELNENKDLKNRYGAGIIPYEVMKPRSKPGVTGIGVPY 780

Query: 72  SVSI 76
           SVSI
Sbjct: 781 SVSI 784

[Close]

BLAST of PI0005354 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 74.3 bits (181), Expect = 4.6e-14
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 1   MAKRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHS 60
           + +++  S   EP I+ AFE FK  L+ LE  ID+ N N  LKNR GAG++ YE++KP S
Sbjct: 822 IGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTS 881

Query: 61  KPGITGSGVPYSVSI 76
           + G+TG GVPYS+SI
Sbjct: 882 EHGVTGMGVPYSISI 896

[Close]

BLAST of PI0005354 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-12
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +  I DAF  F A +  +EKEIDK N +   +NR GAG++PYE+M P S+PG+T  GVP 
Sbjct: 863 DAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPN 922

Query: 72  SVSI 76
           SVSI
Sbjct: 923 SVSI 926

[Close]

BLAST of PI0005354 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 )

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 12  EPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPY 71
           +  I +AF  F A +  +EKEI+K N + D +NR GAG++PYE++ P S+PG+T  GVP 
Sbjct: 856 DAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPN 915

Query: 72  SVSI 76
           SVSI
Sbjct: 916 SVSI 919

[Close]

BLAST of PI0005354 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 60.5 bits (145), Expect = 6.8e-10
Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 1   MAKRKTDSQGREPSISDAFEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHS 60
           + +R +     E    +AFE+F   +K++EK ID+ N+++ LKNR G   +PY ++ P S
Sbjct: 785 LGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSS 844

Query: 61  KPGITGSGVPYSVSI 76
           + G+TG G+P SVSI
Sbjct: 845 EGGVTGRGIPNSVSI 859

[Close]

BLAST of PI0005354 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 19  FEEFKANLKDLEKEIDKLNENKDLKNRYGAGIIPYEVMKPHSKPGITGSGVPYSVSI 76
           F +F   L  +EK I++ N++K LKNR GAG+ PYE++ P S  G+TG G+P S+SI
Sbjct: 861 FNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917

The following BLAST results are available for this feature:

BLAST of PI0005354 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24370	4.5e-14	56.25	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]
Q8GSM2	1.3e-13	54.69	Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1	[more]
P38418	6.4e-13	50.67	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
R9WS04	7.1e-12	53.13	Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=...	[more]
R9WTS6	1.6e-11	46.58	Lipoxygenase 1, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX1 PE=...	[more]

BLAST of PI0005354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDH6	6.0e-22	85.94	Lipoxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00060...	[more]
A0A5A7TDY8	6.0e-22	85.94	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00180 P...	[more]
A0A1S3BNU6	6.0e-22	85.94	lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 ...	[more]
A0A0A0KWY1	1.0e-21	76.00	Lipoxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G28703...	[more]
A0A0A0KZ93	3.0e-21	84.38	Lipoxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G28756...	[more]

BLAST of PI0005354 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21644.1	1.2e-21	85.94	lipoxygenase 2 [Cucumis melo var. makuwa]	[more]
XP_008449947.1	1.2e-21	85.94	PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo]	[more]
KAA0041373.1	1.2e-21	85.94	lipoxygenase 2 [Cucumis melo var. makuwa]	[more]
XP_004142238.3	2.1e-21	84.38	lipoxygenase 2, chloroplastic [Cucumis sativus] >KAE8649494.1 hypothetical prote...	[more]
KGN54487.2	3.1e-20	82.81	hypothetical protein Csa_017864 [Cucumis sativus]	[more]

BLAST of PI0005354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45140.1	4.6e-14	50.67	lipoxygenase 2	[more]
AT1G72520.1	2.5e-12	53.13	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	2.1e-11	50.00	lipoxygenase 3	[more]
AT1G55020.1	6.8e-10	40.00	lipoxygenase 1	[more]
AT1G67560.1	2.0e-09	49.12	PLAT/LH2 domain-containing lipoxygenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 19..46
None	No IPR available	GENE3D	1.20.245.10		coord: 1..74 e-value: 1.1E-16 score: 62.8
None	No IPR available	PANTHER	PTHR11771:SF171	LIPOXYGENASE	coord: 5..74
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 2..58 e-value: 1.1E-11 score: 44.0
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..75 score: 23.238152
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 5..74
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	48484	Lipoxigenase	coord: 12..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005354.1	PI0005354.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0031408	oxylipin biosynthetic process
biological_process	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain
biological_process	GO:0006360	transcription by RNA polymerase I
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000439	transcription factor TFIIH core complex
cellular_component	GO:0005675	transcription factor TFIIH holo complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen