Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGGTAAAGCACGCCTTCATTATGTTTTAATTTTGGTATCTCTATGATTAACGAGGTTTGATCAAAATTATCTAACATATACTGTAAAGTGAATTTCTACATCTGTACTAAAAAAATTATTATTTAACGTAAGTAGGAAAATATAATTAATATATATATATATATGTAAGATTACTAAAAATGAAAATATTTTTCAAAATGATAAATACTAATATACTTCTATCAGTGTCTATTAATATTAGGAGATTTGAAATTTATTATATTTTGTAAATATTTTGATTTATTTGATTATATTTGAAACTTATTCTATATATATAAACATATTTAAATTAGAAATTTGTGTTGTTAACACCCATTTTTGTTTTATACACAGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTGAAGAGAGAATTATTAACAAGGAATCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAG
mRNA sequence
ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTGAAGAGAGAATTATTAACAAGGAATCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAG
Coding sequence (CDS)
ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA
Protein sequence
MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL
Homology
BLAST of PI0005348 vs. ExPASy Swiss-Prot
Match:
Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)
HSP 1 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 103/238 (43.28%), Postives = 130/238 (54.62%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPT 74
+AS F ++ +S + PP P + PPPT TPP +A P SP
Sbjct: 12 LASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP- 71
Query: 75 IIPPPQSSPVSTPS------LPPALPP--PPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134
+ PPP +P S P+ + PA PP PP +PP P + PP VSP P PT P P
Sbjct: 72 VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 131
Query: 135 ------LAPLPTPPTPTPSPPTPAPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAP 194
+P P P +P P+P +P PV AP L PAPAP KH+R+HKHK+ H APAP
Sbjct: 132 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 191
Query: 195 APTVPSPPAPPTVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTKVGLGFIFLVATT 232
AP PSPP+PP + D QD TAPAPSPN NGG + +KG+ W GL +FL+A T
Sbjct: 192 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247
BLAST of PI0005348 vs. ExPASy Swiss-Prot
Match:
Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)
HSP 1 Score: 45.8 bits (107), Expect = 7.7e-04
Identity = 86/202 (42.57%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 11 PSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTP-PPTVATP-PPTAVA 70
PSPT S S P + + +PA P P V P P+ P PP+ A P PP+
Sbjct: 174 PSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAP 233
Query: 71 PSTSPTIIP---PPQSSPVS--TPSLPPALPPPPATPPPLPPPLPP-PQVSPTPLPTPPV 130
PS SP P PP +P S PS P PPPP +PPP PPP PP P +P P P+PP
Sbjct: 234 PSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMP-PSPPS 293
Query: 131 LAPTLAPLPTPPT-PTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVP 190
P+ AP PTPPT P+PSPP+P P + + P+PAP P+PAP+ P
Sbjct: 294 PPPSPAP-PTPPTPPSPSPPSPVPPSPAPVPPSPAP----------------PSPAPSPP 353
Query: 191 SPPAPPTVVDSQDSTAPAPSPN 204
PAPPT S S +P+PSP+
Sbjct: 354 PSPAPPTPSPS-PSPSPSPSPS 356
BLAST of PI0005348 vs. ExPASy TrEMBL
Match:
A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 2.6e-95
Identity = 218/243 (89.71%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA 60
MTH ISFSYFPSPTMASKS FFVI LAFLFSS+ QAPAQPPSLPTVSP P+TPPPTVA
Sbjct: 1 MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60
Query: 61 ------TPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
TPPPT VAPSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP
Sbjct: 61 TSPPLSTPPPTVVAPSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
Query: 121 TPLPTPPVLAPTLA--PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQ 180
TPLPTPPVLAPTLA PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQ
Sbjct: 121 TPLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ 180
Query: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTG 236
APAPAPTVPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTG
Sbjct: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTG 240
BLAST of PI0005348 vs. ExPASy TrEMBL
Match:
A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)
HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 203/229 (88.65%), Postives = 207/229 (90.39%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
MASK F VI LAFLFSSAI QAPAQPPSLPTVSP PSTPPPTV +TPPPT VA
Sbjct: 1 MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60
Query: 75 PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
PSTSP IPPPQSSPVSTPSLPPA PPPPATPPPLPPPLPPPQVSP PLPTPPVLAPTLA
Sbjct: 61 PSTSPA-IPPPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPTLA 120
Query: 135 PLPTP--PTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
PLP P PTPTPSPPTPAPVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180
Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
PTVVDSQDSTAPAPSP+L+ GDPMKGKVGTWTKVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGFNL 228
BLAST of PI0005348 vs. ExPASy TrEMBL
Match:
A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)
HSP 1 Score: 267.7 bits (683), Expect = 4.6e-68
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
MASKSCP VI LAFLF AI QAPAQPPSLPT +P PSTPPPT+ TPPP APS +P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 75 TIIP--PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP---PV 134
TI P PPQ+ PVSTPSLPP LPPPP TPPPL PPPLPPP +P PLP P P
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 135 LAPT---LAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPT 194
++PT +APLPTPPTP PS P APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 195 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KVGTW ++ LGFI +VATT F+
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFH 235
BLAST of PI0005348 vs. ExPASy TrEMBL
Match:
A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 7.8e-68
Identity = 176/231 (76.19%), Postives = 184/231 (79.65%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPS-------TPPPTVATPPPTAV 74
MASKS P VI LAFLF AIGQAPAQPPSLPT S PS TPPP +TPPP V
Sbjct: 1 MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60
Query: 75 APSTSPTIIP--PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP 134
APSTSPT+ P PPQ +PVSTPSLPP LPPPPATPPPLP PPPQVSPTP P V AP
Sbjct: 61 APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120
Query: 135 TLAPLPTPPTPTPSPPTPAPVAAPEL--SPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSP 194
TLAPLP PP P P PPTPAPVAAP L SPAPAPGKH+H+R HKHKKH APAPAPT+PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180
Query: 195 PAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
PAPPTVVDSQDSTAPAPSPNLNGGDPM+GKV TWT+V LGFI LVATT N
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSLN 228
BLAST of PI0005348 vs. ExPASy TrEMBL
Match:
A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 2.5e-66
Identity = 172/234 (73.50%), Postives = 182/234 (77.78%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
MASKSC VI LAFLF AI QAPAQPPSLPT +P PSTPPPT+ TPPP APS +P
Sbjct: 1 MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 75 TIIP--PPQSSPVSTPSLPPA----------LPPPPATPPPLPPPLPPPQVSPTPLPTPP 134
TI P PPQ+ PVSTPSLPP LPPPPATPPPLPPPLP PQ+SPTPL
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPL---- 120
Query: 135 VLAPTLAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVP 194
+APLPTPPTP PSPP APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP VP
Sbjct: 121 ----QVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVP 180
Query: 195 SPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
SPPAPPTVVDSQ DSTAPAPSPNLNGGDPMK KVG W +V LGFI +VA+T FN
Sbjct: 181 SPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFN 226
BLAST of PI0005348 vs. NCBI nr
Match:
KGN61400.1 (hypothetical protein Csa_005957 [Cucumis sativus])
HSP 1 Score: 358.2 bits (918), Expect = 5.3e-95
Identity = 218/243 (89.71%), Postives = 223/243 (91.77%), Query Frame = 0
Query: 1 MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA 60
MTH ISFSYFPSPTMASKS FFVI LAFLFSS+ QAPAQPPSLPTVSP P+TPPPTVA
Sbjct: 1 MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60
Query: 61 ------TPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
TPPPT VAPSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP
Sbjct: 61 TSPPLSTPPPTVVAPSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
Query: 121 TPLPTPPVLAPTLA--PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQ 180
TPLPTPPVLAPTLA PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQ
Sbjct: 121 TPLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ 180
Query: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTG 236
APAPAPTVPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTG
Sbjct: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTG 240
BLAST of PI0005348 vs. NCBI nr
Match:
XP_011649058.1 (lysine-rich arabinogalactan protein 19 [Cucumis sativus])
HSP 1 Score: 332.0 bits (850), Expect = 4.1e-87
Identity = 205/229 (89.52%), Postives = 210/229 (91.70%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA------TPPPTAVA 74
MASKS FFVI LAFLFSS+ QAPAQPPSLPTVSP P+TPPPTVA TPPPT VA
Sbjct: 1 MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 60
Query: 75 PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
PSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA
Sbjct: 61 PSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 120
Query: 135 --PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180
Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
PTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGFNL 228
BLAST of PI0005348 vs. NCBI nr
Match:
XP_008457186.2 (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])
HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 203/229 (88.65%), Postives = 207/229 (90.39%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
MASK F VI LAFLFSSAI QAPAQPPSLPTVSP PSTPPPTV +TPPPT VA
Sbjct: 1 MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60
Query: 75 PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
PSTSP IPPPQSSPVSTPSLPPA PPPPATPPPLPPPLPPPQVSP PLPTPPVLAPTLA
Sbjct: 61 PSTSPA-IPPPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPTLA 120
Query: 135 PLPTP--PTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
PLP P PTPTPSPPTPAPVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180
Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
PTVVDSQDSTAPAPSP+L+ GDPMKGKVGTWTKVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGFNL 228
BLAST of PI0005348 vs. NCBI nr
Match:
XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])
HSP 1 Score: 301.2 bits (770), Expect = 7.7e-78
Identity = 190/226 (84.07%), Postives = 197/226 (87.17%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
MASKS PF VI L FLF AIGQAP QPP+LPTVSP PSTPPPTV +TPPPT VA
Sbjct: 1 MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60
Query: 75 PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
PSTSPT IPPPQ P+STPSLPPALPPPPATPPPLPPPLPPPQVSPTP PPV APTLA
Sbjct: 61 PSTSPT-IPPPQ-PPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPTLA 120
Query: 135 PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPPT 194
PL TPPTP PSPPTPAP+A PEL+PAPAPGKHKHRR HKHKKHQAPAPAPTVPSPPAPPT
Sbjct: 121 PLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAPAPTVPSPPAPPT 180
Query: 195 VVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
VVDSQDSTAPAPSPNLNGGDPMKGKV T ++V LGFIFLVATTGFN
Sbjct: 181 VVDSQDSTAPAPSPNLNGGDPMKGKVETCSRVVLGFIFLVATTGFN 224
BLAST of PI0005348 vs. NCBI nr
Match:
XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])
HSP 1 Score: 267.7 bits (683), Expect = 9.5e-68
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
MASKSCP VI LAFLF AI QAPAQPPSLPT +P PSTPPPT+ TPPP APS +P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 75 TIIP--PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP---PV 134
TI P PPQ+ PVSTPSLPP LPPPP TPPPL PPPLPPP +P PLP P P
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 135 LAPT---LAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPT 194
++PT +APLPTPPTP PS P APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 195 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KVGTW ++ LGFI +VATT F+
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFH 235
BLAST of PI0005348 vs. TAIR 10
Match:
AT1G68725.1 (arabinogalactan protein 19 )
HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 103/238 (43.28%), Postives = 130/238 (54.62%), Query Frame = 0
Query: 15 MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPT 74
+AS F ++ +S + PP P + PPPT TPP +A P SP
Sbjct: 12 LASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP- 71
Query: 75 IIPPPQSSPVSTPS------LPPALPP--PPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134
+ PPP +P S P+ + PA PP PP +PP P + PP VSP P PT P P
Sbjct: 72 VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 131
Query: 135 ------LAPLPTPPTPTPSPPTPAPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAP 194
+P P P +P P+P +P PV AP L PAPAP KH+R+HKHK+ H APAP
Sbjct: 132 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 191
Query: 195 APTVPSPPAPPTVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTKVGLGFIFLVATT 232
AP PSPP+PP + D QD TAPAPSPN NGG + +KG+ W GL +FL+A T
Sbjct: 192 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9S740 | 4.5e-20 | 43.28 | Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... | [more] |
Q9FPQ6 | 7.7e-04 | 42.57 | Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LHJ4 | 2.6e-95 | 89.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1 | [more] |
A0A1S3C506 | 1.1e-85 | 88.65 | lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... | [more] |
A0A6J1IGY8 | 4.6e-68 | 74.04 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1DYJ7 | 7.8e-68 | 76.19 | lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1EVZ4 | 2.5e-66 | 73.50 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |
KGN61400.1 | 5.3e-95 | 89.71 | hypothetical protein Csa_005957 [Cucumis sativus] | [more] |
XP_011649058.1 | 4.1e-87 | 89.52 | lysine-rich arabinogalactan protein 19 [Cucumis sativus] | [more] |
XP_008457186.2 | 2.2e-85 | 88.65 | PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo] | [more] |
XP_038875574.1 | 7.7e-78 | 84.07 | lysine-rich arabinogalactan protein 19-like [Benincasa hispida] | [more] |
XP_022974214.1 | 9.5e-68 | 74.04 | lysine-rich arabinogalactan protein 19-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G68725.1 | 3.2e-21 | 43.28 | arabinogalactan protein 19 | [more] |