PI0005348 (gene) Melon (PI 482460) v1

Overview
NamePI0005348
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionlysine-rich arabinogalactan protein 19
Locationchr05: 9960962 .. 9962113 (-)
RNA-Seq ExpressionPI0005348
SyntenyPI0005348
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGGTAAAGCACGCCTTCATTATGTTTTAATTTTGGTATCTCTATGATTAACGAGGTTTGATCAAAATTATCTAACATATACTGTAAAGTGAATTTCTACATCTGTACTAAAAAAATTATTATTTAACGTAAGTAGGAAAATATAATTAATATATATATATATATGTAAGATTACTAAAAATGAAAATATTTTTCAAAATGATAAATACTAATATACTTCTATCAGTGTCTATTAATATTAGGAGATTTGAAATTTATTATATTTTGTAAATATTTTGATTTATTTGATTATATTTGAAACTTATTCTATATATATAAACATATTTAAATTAGAAATTTGTGTTGTTAACACCCATTTTTGTTTTATACACAGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTGAAGAGAGAATTATTAACAAGGAATCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAG

mRNA sequence

ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTGAAGAGAGAATTATTAACAAGGAATCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAG

Coding sequence (CDS)

ATGACTCATACCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGCCCTTTTTTTGTCATCTCCCTTGCCTTTCTATTCTCTTCTGCGATCGGCCAGGCCCCGGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCTCCCTTCTACCCCACCTCCAACTGTAGCTACACCACCACCTACTGCTGTTGCACCATCAACAAGTCCAACTATTATTCCACCACCACAAAGTTCACCTGTCTCGACCCCGTCCCTACCCCCAGCATTGCCACCTCCCCCCGCTACGCCTCCACCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCCACTCCTTTGCCGACACCACCGGTACTAGCTCCCACCTTAGCACCATTACCGACTCCGCCAACGCCAACACCTTCGCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGTTATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCAACCGTCCCGAGCCCACCCGCACCACCTACCGTGGTGGATTCACAAGATAGTACAGCGCCGGCACCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAAAGTTGGATTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA

Protein sequence

MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL
Homology
BLAST of PI0005348 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 103/238 (43.28%), Postives = 130/238 (54.62%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPT 74
           +AS     F ++     +S +      PP      P  + PPPT  TPP +A  P  SP 
Sbjct: 12  LASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP- 71

Query: 75  IIPPPQSSPVSTPS------LPPALPP--PPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134
           + PPP  +P S P+      + PA PP  PP +PP   P + PP VSP P PT P   P 
Sbjct: 72  VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 131

Query: 135 ------LAPLPTPPTPTPSPPTPAPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAP 194
                  +P P P +P P+P +P PV AP    L PAPAP   KH+R+HKHK+ H APAP
Sbjct: 132 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 191

Query: 195 APTVPSPPAPPTVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTKVGLGFIFLVATT 232
           AP  PSPP+PP + D QD TAPAPSPN NGG   + +KG+   W   GL  +FL+A T
Sbjct: 192 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

BLAST of PI0005348 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.7e-04
Identity = 86/202 (42.57%), Postives = 107/202 (52.97%), Query Frame = 0

Query: 11  PSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTP-PPTVATP-PPTAVA 70
           PSPT  S S P          +  +  +PA P   P V P P+ P PP+ A P PP+   
Sbjct: 174 PSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAP 233

Query: 71  PSTSPTIIP---PPQSSPVS--TPSLPPALPPPPATPPPLPPPLPP-PQVSPTPLPTPPV 130
           PS SP   P   PP  +P S   PS  P  PPPP +PPP PPP PP P  +P P P+PP 
Sbjct: 234 PSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMP-PSPPS 293

Query: 131 LAPTLAPLPTPPT-PTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVP 190
             P+ AP PTPPT P+PSPP+P P +   + P+PAP                P+PAP+ P
Sbjct: 294 PPPSPAP-PTPPTPPSPSPPSPVPPSPAPVPPSPAP----------------PSPAPSPP 353

Query: 191 SPPAPPTVVDSQDSTAPAPSPN 204
             PAPPT   S  S +P+PSP+
Sbjct: 354 PSPAPPTPSPS-PSPSPSPSPS 356

BLAST of PI0005348 vs. ExPASy TrEMBL
Match: A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.6e-95
Identity = 218/243 (89.71%), Postives = 223/243 (91.77%), Query Frame = 0

Query: 1   MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA 60
           MTH ISFSYFPSPTMASKS  FFVI LAFLFSS+  QAPAQPPSLPTVSP P+TPPPTVA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60

Query: 61  ------TPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
                 TPPPT VAPSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP
Sbjct: 61  TSPPLSTPPPTVVAPSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120

Query: 121 TPLPTPPVLAPTLA--PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQ 180
           TPLPTPPVLAPTLA  PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQ
Sbjct: 121 TPLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ 180

Query: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTG 236
           APAPAPTVPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTG
Sbjct: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTG 240

BLAST of PI0005348 vs. ExPASy TrEMBL
Match: A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 203/229 (88.65%), Postives = 207/229 (90.39%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
           MASK   F VI LAFLFSSAI QAPAQPPSLPTVSP PSTPPPTV      +TPPPT VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 75  PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
           PSTSP  IPPPQSSPVSTPSLPPA PPPPATPPPLPPPLPPPQVSP PLPTPPVLAPTLA
Sbjct: 61  PSTSPA-IPPPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPTLA 120

Query: 135 PLPTP--PTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
           PLP P  PTPTPSPPTPAPVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180

Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
           PTVVDSQDSTAPAPSP+L+ GDPMKGKVGTWTKVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGFNL 228

BLAST of PI0005348 vs. ExPASy TrEMBL
Match: A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.6e-68
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
           MASKSCP  VI LAFLF  AI QAPAQPPSLPT +P PSTPPPT+  TPPP   APS +P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 75  TIIP--PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP---PV 134
           TI P  PPQ+ PVSTPSLPP LPPPP TPPPL      PPPLPPP  +P PLP P   P 
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 135 LAPT---LAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPT 194
           ++PT   +APLPTPPTP PS P  APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP 
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 195 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
           VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KVGTW ++ LGFI +VATT F+
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFH 235

BLAST of PI0005348 vs. ExPASy TrEMBL
Match: A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.8e-68
Identity = 176/231 (76.19%), Postives = 184/231 (79.65%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPS-------TPPPTVATPPPTAV 74
           MASKS P  VI LAFLF  AIGQAPAQPPSLPT S  PS       TPPP  +TPPP  V
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 75  APSTSPTIIP--PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP 134
           APSTSPT+ P  PPQ +PVSTPSLPP LPPPPATPPPLP   PPPQVSPTP   P V AP
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120

Query: 135 TLAPLPTPPTPTPSPPTPAPVAAPEL--SPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSP 194
           TLAPLP PP P P PPTPAPVAAP L  SPAPAPGKH+H+R HKHKKH APAPAPT+PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180

Query: 195 PAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
           PAPPTVVDSQDSTAPAPSPNLNGGDPM+GKV TWT+V LGFI LVATT  N
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSLN 228

BLAST of PI0005348 vs. ExPASy TrEMBL
Match: A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.5e-66
Identity = 172/234 (73.50%), Postives = 182/234 (77.78%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
           MASKSC   VI LAFLF  AI QAPAQPPSLPT +P PSTPPPT+  TPPP   APS +P
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 75  TIIP--PPQSSPVSTPSLPPA----------LPPPPATPPPLPPPLPPPQVSPTPLPTPP 134
           TI P  PPQ+ PVSTPSLPP           LPPPPATPPPLPPPLP PQ+SPTPL    
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPL---- 120

Query: 135 VLAPTLAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVP 194
                +APLPTPPTP PSPP  APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP VP
Sbjct: 121 ----QVAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVP 180

Query: 195 SPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
           SPPAPPTVVDSQ DSTAPAPSPNLNGGDPMK KVG W +V LGFI +VA+T FN
Sbjct: 181 SPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFN 226

BLAST of PI0005348 vs. NCBI nr
Match: KGN61400.1 (hypothetical protein Csa_005957 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 5.3e-95
Identity = 218/243 (89.71%), Postives = 223/243 (91.77%), Query Frame = 0

Query: 1   MTHTISFSYFPSPTMASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA 60
           MTH ISFSYFPSPTMASKS  FFVI LAFLFSS+  QAPAQPPSLPTVSP P+TPPPTVA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60

Query: 61  ------TPPPTAVAPSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120
                 TPPPT VAPSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP
Sbjct: 61  TSPPLSTPPPTVVAPSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSP 120

Query: 121 TPLPTPPVLAPTLA--PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQ 180
           TPLPTPPVLAPTLA  PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQ
Sbjct: 121 TPLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ 180

Query: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTG 236
           APAPAPTVPSPPAPPTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTG
Sbjct: 181 APAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTG 240

BLAST of PI0005348 vs. NCBI nr
Match: XP_011649058.1 (lysine-rich arabinogalactan protein 19 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 4.1e-87
Identity = 205/229 (89.52%), Postives = 210/229 (91.70%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA------TPPPTAVA 74
           MASKS  FFVI LAFLFSS+  QAPAQPPSLPTVSP P+TPPPTVA      TPPPT VA
Sbjct: 1   MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 60

Query: 75  PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
           PSTSPT IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA
Sbjct: 61  PSTSPT-IPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 120

Query: 135 --PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
             PLPTPPTPTPSPPTPAPVAAPE SPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180

Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
           PTVVDSQDSTAPAPSP+LNGGDP+K KVG W+KVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGFNL 228

BLAST of PI0005348 vs. NCBI nr
Match: XP_008457186.2 (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 203/229 (88.65%), Postives = 207/229 (90.39%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
           MASK   F VI LAFLFSSAI QAPAQPPSLPTVSP PSTPPPTV      +TPPPT VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 75  PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
           PSTSP  IPPPQSSPVSTPSLPPA PPPPATPPPLPPPLPPPQVSP PLPTPPVLAPTLA
Sbjct: 61  PSTSPA-IPPPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPTLA 120

Query: 135 PLPTP--PTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 194
           PLP P  PTPTPSPPTPAPVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 PLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAP 180

Query: 195 PTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFNL 236
           PTVVDSQDSTAPAPSP+L+ GDPMKGKVGTWTKVGLGFIFLVATTGFNL
Sbjct: 181 PTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGFNL 228

BLAST of PI0005348 vs. NCBI nr
Match: XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 7.7e-78
Identity = 190/226 (84.07%), Postives = 197/226 (87.17%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTV------ATPPPTAVA 74
           MASKS PF VI L FLF  AIGQAP QPP+LPTVSP PSTPPPTV      +TPPPT VA
Sbjct: 1   MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60

Query: 75  PSTSPTIIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLA 134
           PSTSPT IPPPQ  P+STPSLPPALPPPPATPPPLPPPLPPPQVSPTP   PPV APTLA
Sbjct: 61  PSTSPT-IPPPQ-PPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPTLA 120

Query: 135 PLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPPT 194
           PL TPPTP PSPPTPAP+A PEL+PAPAPGKHKHRR HKHKKHQAPAPAPTVPSPPAPPT
Sbjct: 121 PLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAPAPTVPSPPAPPT 180

Query: 195 VVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
           VVDSQDSTAPAPSPNLNGGDPMKGKV T ++V LGFIFLVATTGFN
Sbjct: 181 VVDSQDSTAPAPSPNLNGGDPMKGKVETCSRVVLGFIFLVATTGFN 224

BLAST of PI0005348 vs. NCBI nr
Match: XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 9.5e-68
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVA-TPPPTAVAPSTSP 74
           MASKSCP  VI LAFLF  AI QAPAQPPSLPT +P PSTPPPT+  TPPP   APS +P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 75  TIIP--PPQSSPVSTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPLPTP---PV 134
           TI P  PPQ+ PVSTPSLPP LPPPP TPPPL      PPPLPPP  +P PLP P   P 
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 135 LAPT---LAPLPTPPTPTPSPPTPAPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPT 194
           ++PT   +APLPTPPTP PS P  APVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPAP 
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 195 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTKVGLGFIFLVATTGFN 235
           VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KVGTW ++ LGFI +VATT F+
Sbjct: 181 VPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAFH 235

BLAST of PI0005348 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 103/238 (43.28%), Postives = 130/238 (54.62%), Query Frame = 0

Query: 15  MASKSCPFFVISLAFLFSSAIGQAPAQPPSLPTVSPLPSTPPPTVATPPPTAVAPSTSPT 74
           +AS     F ++     +S +      PP      P  + PPPT  TPP +A  P  SP 
Sbjct: 12  LASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASP- 71

Query: 75  IIPPPQSSPVSTPS------LPPALPP--PPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134
           + PPP  +P S P+      + PA PP  PP +PP   P + PP VSP P PT P   P 
Sbjct: 72  VTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPA 131

Query: 135 ------LAPLPTPPTPTPSPPTPAPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAP 194
                  +P P P +P P+P +P PV AP    L PAPAP   KH+R+HKHK+ H APAP
Sbjct: 132 SPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAP 191

Query: 195 APTVPSPPAPPTVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTKVGLGFIFLVATT 232
           AP  PSPP+PP + D QD TAPAPSPN NGG   + +KG+   W   GL  +FL+A T
Sbjct: 192 APIPPSPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9S7404.5e-2043.28Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... [more]
Q9FPQ67.7e-0442.57Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0LHJ42.6e-9589.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1[more]
A0A1S3C5061.1e-8588.65lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... [more]
A0A6J1IGY84.6e-6874.04lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1DYJ77.8e-6876.19lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1EVZ42.5e-6673.50lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
Match NameE-valueIdentityDescription
KGN61400.15.3e-9589.71hypothetical protein Csa_005957 [Cucumis sativus][more]
XP_011649058.14.1e-8789.52lysine-rich arabinogalactan protein 19 [Cucumis sativus][more]
XP_008457186.22.2e-8588.65PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo][more]
XP_038875574.17.7e-7884.07lysine-rich arabinogalactan protein 19-like [Benincasa hispida][more]
XP_022974214.19.5e-6874.04lysine-rich arabinogalactan protein 19-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G68725.13.2e-2143.28arabinogalactan protein 19 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..213
NoneNo IPR availablePANTHERPTHR36549:SF3LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 38..231
IPR038793Lysine-rich arabinogalactan protein 19PANTHERPTHR36549LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 38..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005348.1PI0005348.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane