PI0005323 (gene) Melon (PI 482460) v1

Overview
NamePI0005323
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 22794900 .. 22796005 (-)
RNA-Seq ExpressionPI0005323
SyntenyPI0005323
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCATGTGAGGCAGCGGTGGTAGCAATGAGCATGGCAAAAAGGTACACATGAATTCCACTTTCGGCGACGAGATTGGTACCTCAATCTGCTCTTCGATTTTGAGATGTTTTTATATAATTACTGTTGAATTTGAACATGACGTCAGGAAATAATTCTCAGCACCGAATCGCAGTTCCAGAATCAAGGAAGCAGCTTAGGTAACTTTCAATCTGAAGGAAAAATTTCAAATTTATTTTGATTGTAAAGTTTATTATGAACGGTTCCATTTTAGGGCGTTTGAAGGCGATTTGTCGGGGAAACATTGAAGAAATTTGCTTGTGCTCAAGGTTAGTAATGCTGGATGTTTTTGATTGATTGATGGATCGATGGATTCTACTGTTATTTGGTAATTTGCTGCTGAATTTTACAATTTGGATGATGAATTTTGCAGCAATTGTTCTTGCTCCAGCAGTGGCAGTGCAATTCCTCTCACGTACGTAACCCTAACTTTCAACGTAATCCACAGTTTTCGTTTTCAGTACTTCCGTTTTTCAATCGGTGGAGTGTAGAGAAAGAATTTGCGTGGTTTTGTCATTCAGCAGGTTAATCAGCCACTGCAATTGCCTTTGCTTTCTCCGGCGAGCTCTAAACATTTAAGAGCGACGATTCTCCCCAATTTGACTTTACTGACAATCCGCTCCCTGATTGAGGCCGTTCCCTCTGCTTTTCCCGACGAGCTCTGACCATTTAGAAGCAAGGCTTCTCCCCAATTTGTCTCTACAAGGAACTCGTTCGCAGACTGAAGCCATACACTCTGTCATCGGGTACGTGAATTCATCTTGGAATCGATAATGGATCGTCTCTGTTAACTTGATTCTTTCGTCCTTTCCTGACCGACCTCTTTCTCGATGAGAGATTAGATCGACCCACTCGCGTCGTGAGGATGGCACCACAGCGTCGTCTCCCAATCTTATTCCCGAAGAAAATACAATCACTGAAAATTTCATCAACATTTCACAGCGGATTGCCTTCTTTCCCACCAATCCCTAGAAATCTCGTCGATTGTTCCCGGAGATAACAGCGGTCCTGGAAACCGGCGAACCCTCGGAGTTGCCGGGTAA

mRNA sequence

ATGGGTTCATGTGAGGCAGCGGTGGTAGCAATGAGCATGGCAAAAAGGCGATTTGTCGGGGAAACATTGAAGAAATTTGCTTGTGCTCAAGCAATTGTTCTTGCTCCAGCAGTGGCAAGAAAGAATTTGCGTGGTTTTGTCATTCAGCAGGTTAATCAGCCACTGCAATTGCCTTTGCTTTCTCCGGCGAGCTCTAAACATTTAAGAGCGACGATTCTCCCCAATTTGACTTTACTGACAATCCGCTCCCTGATTGAGGCCAAGCAAGGCTTCTCCCCAATTTGTCTCTACAAGGAACTCGTTCGCAGACTGAAGCCATACACTCTGTCATCGGCGGATTGCCTTCTTTCCCACCAATCCCTAGAAATCTCGTCGATTGTTCCCGGAGATAACAGCGGTCCTGGAAACCGGCGAACCCTCGGAGTTGCCGGGTAA

Coding sequence (CDS)

ATGGGTTCATGTGAGGCAGCGGTGGTAGCAATGAGCATGGCAAAAAGGCGATTTGTCGGGGAAACATTGAAGAAATTTGCTTGTGCTCAAGCAATTGTTCTTGCTCCAGCAGTGGCAAGAAAGAATTTGCGTGGTTTTGTCATTCAGCAGGTTAATCAGCCACTGCAATTGCCTTTGCTTTCTCCGGCGAGCTCTAAACATTTAAGAGCGACGATTCTCCCCAATTTGACTTTACTGACAATCCGCTCCCTGATTGAGGCCAAGCAAGGCTTCTCCCCAATTTGTCTCTACAAGGAACTCGTTCGCAGACTGAAGCCATACACTCTGTCATCGGCGGATTGCCTTCTTTCCCACCAATCCCTAGAAATCTCGTCGATTGTTCCCGGAGATAACAGCGGTCCTGGAAACCGGCGAACCCTCGGAGTTGCCGGGTAA

Protein sequence

MGSCEAAVVAMSMAKRRFVGETLKKFACAQAIVLAPAVARKNLRGFVIQQVNQPLQLPLLSPASSKHLRATILPNLTLLTIRSLIEAKQGFSPICLYKELVRRLKPYTLSSADCLLSHQSLEISSIVPGDNSGPGNRRTLGVAG
Homology
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BLAST of PI0005323 vs. ExPASy TrEMBL
Match: A0A0A0L3R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642280 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 115/148 (77.70%), Postives = 121/148 (81.76%), Query Frame = 0 

Query: 1   MGSCEAAVVAMSMAKRR----FVGETLKKFACAQAIVLAPAVARKNLRGFVIQQVNQPLQ 60
           MGSCEAAVVAMSMAKR     FVGETL+KFACA AIVLAPA ARKN RGFVIQQVNQPLQ
Sbjct: 1   MGSCEAAVVAMSMAKRALEGGFVGETLRKFACAHAIVLAPAAARKNRRGFVIQQVNQPLQ 60

Query: 61  LPLLSPASSKHLRATILPNLTLLTIRSLIEAKQGFSPICLYKELVRRLKPYTLSSADCLL 120
           LPLLSPAS+KHLRAT                KQ FSPICL+K+LVRRLKPYTL+SADC L
Sbjct: 61  LPLLSPASAKHLRAT----------------KQSFSPICLHKKLVRRLKPYTLTSADCPL 120

Query: 121 SHQSLEISSIVPGDNSGPGNRRTLGVAG 145
           SHQSLEISS VPGDNSGPGNRRTLGV+G
Sbjct: 121 SHQSLEISSSVPGDNSGPGNRRTLGVSG 132

The following BLAST results are available for this feature:
BLAST of PI0005323 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005323 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3R01.2e-5077.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642280 PE=4 SV=1[more]
BLAST of PI0005323 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0005323 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005323.1PI0005323.1mRNA