PI0005148 (gene) Melon (PI 482460) v1

Overview


Name	PI0005148
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr11: 9499228 .. 9499485 (+)
RNA-Seq Expression	PI0005148
Synteny	PI0005148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCAAACTTGAGCGAGCAAGTTGCAAGTGTGGCAACAAGGAATAAGGTTGTAGCACATCAGAAGGTTGACCGCCTTGAGGTTGTGGCGGAGGAATTAATCGAAGAAATAGAAAAAATGAGTCCCTTAGAACCAAGACTCTCGCCTGACGAGTTAGAACTCATAGAAGCCACGCAACCAAGGAAAGGCAAAGGCAAAGTGGGGACATCCAGGCCTAAGGATGTCCAGAAATGCGAAACATTGAGTGCCAAGTGA

mRNA sequence

ATGCTTGCAAACTTGAGCGAGCAAGTTGCAAGTGTGGCAACAAGGAATAAGGTTGTAGCACATCAGAAGGTTGACCGCCTTGAGGTTGTGGCGGAGGAATTAATCGAAGAAATAGAAAAAATGAGTCCCTTAGAACCAAGACTCTCGCCTGACGAGTTAGAACTCATAGAAGCCACGCAACCAAGGAAAGGCAAAGGCAAAGTGGGGACATCCAGGCCTAAGGATGTCCAGAAATGCGAAACATTGAGTGCCAAGTGA

Coding sequence (CDS)

ATGCTTGCAAACTTGAGCGAGCAAGTTGCAAGTGTGGCAACAAGGAATAAGGTTGTAGCACATCAGAAGGTTGACCGCCTTGAGGTTGTGGCGGAGGAATTAATCGAAGAAATAGAAAAAATGAGTCCCTTAGAACCAAGACTCTCGCCTGACGAGTTAGAACTCATAGAAGCCACGCAACCAAGGAAAGGCAAAGGCAAAGTGGGGACATCCAGGCCTAAGGATGTCCAGAAATGCGAAACATTGAGTGCCAAGTGA

Protein sequence

MLANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQPRKGKGKVGTSRPKDVQKCETLSAK

Homology

[Close]

BLAST of PI0005148 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           LANLSEQ  SVAT+NK VA Q+V+ LEVV EE  +EI++MS LEPRL P E  L+   QP
Sbjct: 132 LANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQP 191

Query: 62  RKGKGKVGTSRPKDVQKCETLS 84
           +KGK K GTSRP+DVQK   LS
Sbjct: 192 KKGKNKEGTSRPEDVQKGSKLS 213

[Close]

BLAST of PI0005148 vs. ExPASy TrEMBL
Match: A0A5D3BYN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00320 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 1   MLANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQ 60
           ML +LSEQV SV  RNKVVAHQ+VDRL+VVA E  ++IE+MSPLE RL P E  L+ ATQ
Sbjct: 73  MLVDLSEQVESVTMRNKVVAHQEVDRLDVVAVEFSQKIERMSPLELRLRPKERGLVSATQ 132

Query: 61  PRKGKGKVGTSRPKDVQKCETLSA 85
           P+K K KV TS+ +DV+K   + A
Sbjct: 133 PKKDKNKVVTSKLEDVKKGSKMRA 156

[Close]

BLAST of PI0005148 vs. ExPASy TrEMBL
Match: A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-12
Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           L++LSE+V   ATR K   +QKVD LEVVAEE  +EIE+MSPLEPRLSP+E  L E  QP
Sbjct: 70  LSHLSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQP 129

Query: 62  RKGKGKVGTSRPKDVQKCE 81
           +K K K GTSR +D  + E
Sbjct: 130 KKKKSKAGTSRLEDALQGE 148

[Close]

BLAST of PI0005148 vs. ExPASy TrEMBL
Match: A0A5A7UBY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00710 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           L  LSEQV SVA R KV  H+KVD ++VV EEL  EIE MSPLEPRL P E  L+    P
Sbjct: 113 LTGLSEQVDSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLEPRLRPKEPRLVSTQLP 172

Query: 62  RKGKGKVGTSRPKDVQK 79
           +K K K  TSRP+DVQ+
Sbjct: 173 KKSKSKAWTSRPEDVQR 189

[Close]

BLAST of PI0005148 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.8e-12
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDE--LELIEAT 61
           LA+LSEQV SV TR+KV  HQ+VDR++V+ EE   EIE MSPL PR  P+E  L  IE  
Sbjct: 170 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 229

Query: 62  QPRKGKGKVGTSRPKDVQKCETLSAK 86
           +  K K K GTSRPKD+Q+   +SA+
Sbjct: 230 KKSKSKRKAGTSRPKDIQRGNKMSAQ 255

[Close]

BLAST of PI0005148 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 3.0e-16
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           LANLSEQ  SVAT+NK VA Q+V+ LEVV EE  +EI++MS LEPRL P E  L+   QP
Sbjct: 132 LANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQP 191

Query: 62  RKGKGKVGTSRPKDVQKCETLS 84
           +KGK K GTSRP+DVQK   LS
Sbjct: 192 KKGKNKEGTSRPEDVQKGSKLS 213

[Close]

BLAST of PI0005148 vs. NCBI nr
Match: KAA0066651.1 (hypothetical protein E6C27_scaffold979G00830 [Cucumis melo var. makuwa] >TYK04094.1 hypothetical protein E5676_scaffold2119G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 1   MLANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQ 60
           ML +LSEQV SV  RNKVVAHQ+VDRL+VVA E  ++IE+MSPLE RL P E  L+ ATQ
Sbjct: 73  MLVDLSEQVESVTMRNKVVAHQEVDRLDVVAVEFSQKIERMSPLELRLRPKERGLVSATQ 132

Query: 61  PRKGKGKVGTSRPKDVQKCETLSA 85
           P+K K KV TS+ +DV+K   + A
Sbjct: 133 PKKDKNKVVTSKLEDVKKGSKMRA 156

[Close]

BLAST of PI0005148 vs. NCBI nr
Match: KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-12
Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           L++LSE+V   ATR K   +QKVD LEVVAEE  +EIE+MSPLEPRLSP+E  L E  QP
Sbjct: 70  LSHLSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQP 129

Query: 62  RKGKGKVGTSRPKDVQKCE 81
           +K K K GTSR +D  + E
Sbjct: 130 KKKKSKAGTSRLEDALQGE 148

[Close]

BLAST of PI0005148 vs. NCBI nr
Match: KAA0053403.1 (hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-12
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDELELIEATQP 61
           L  LSEQV SVA R KV  H+KVD ++VV EEL  EIE MSPLEPRL P E  L+    P
Sbjct: 113 LTGLSEQVDSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLEPRLRPKEPRLVSTQLP 172

Query: 62  RKGKGKVGTSRPKDVQK 79
           +K K K  TSRP+DVQ+
Sbjct: 173 KKSKSKAWTSRPEDVQR 189

[Close]

BLAST of PI0005148 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 7.8e-12
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 2   LANLSEQVASVATRNKVVAHQKVDRLEVVAEELIEEIEKMSPLEPRLSPDE--LELIEAT 61
           LA+LSEQV SV TR+KV  HQ+VDR++V+ EE   EIE MSPL PR  P+E  L  IE  
Sbjct: 139 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 198

Query: 62  QPRKGKGKVGTSRPKDVQKCETLSAK 86
           +  K K K GTSRPKD+Q+   +SA+
Sbjct: 199 KKSKSKRKAGTSRPKDIQRGNKMSAQ 224

The following BLAST results are available for this feature:

BLAST of PI0005148 vs.


Match Name	E-value	Identity	Description

BLAST of PI0005148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXZ2	1.5e-16	63.41	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BYN0	1.1e-14	60.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TQ54	1.7e-12	59.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UBY9	2.2e-12	59.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TBU7	3.8e-12	55.81	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of PI0005148 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052868.1	3.0e-16	63.41	stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ...	[more]
KAA0066651.1	2.2e-14	60.71	hypothetical protein E6C27_scaffold979G00830 [Cucumis melo var. makuwa] >TYK0409...	[more]
KAA0043535.1	3.5e-12	59.49	hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa]	[more]
KAA0053403.1	4.6e-12	59.74	hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa]	[more]
TYK25768.1	7.8e-12	55.81	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0005148 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005148.1	PI0005148.1	mRNA