PI0005074 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTAGTCAACTAATTTCCATCCTTCTTCCATTTCCATCACTCTTTATAATCATCCACACAATTTTCAATTTCACATTTCAAAAATCCCCCAATAAATCGACAATGGTCTTCTCCACTCCCCAACATCCTCCCACCGCCGATTCCGGCACGACGGCGAAAACCCCATCCACCGGCCTCCGCCGCTCCGTCACAGCTCTAGCAGCTCTCTGTGCCAAAAAAGCCTCCCTACTCACCAAAAAACTTAAATTGAAGCCGAGTCACGACCACCCGAGTCACCCGAGTCCAAGGTCACCGTTGGCTCGCCCGAGGAAGATGCTGAAGACAATTAGCCAATCGGCGATGAATTTGGTTCACAAGAAAAGGACCGGCCGACGGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGGGGCCAGGGTGGGGTATGGCAAAGGGGAATCTTGATGGGGGACAAATGTCAACCGTTGGATTTTTCGGGTGCAATTTATTACGATAGTAACGGACACAAGATGAACGAACCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAATCTCAACCCTAAACCGCTCCCAAACCGTGATGTCATTTTATTATTTTTCTTTTTGTTTAATGTCTTTTTAAATTTGTATTTAGTTGTAAATTTTTTTGGTTAAATTAGATAGATAAATTTAGTCTATTTTTTTTATGTAATATGTGTGTTTATTAACAGTTCATTTTTAGTAGTAAATTAGATTTGAACATATCTCAAACTATCATCTTATTATTAGTCGATGATGTATGATCGTCTATTATTTTTGTAATTAGTAGTGGGTGTAGTGATAATTCGAATTCTCTTCGATTTTATATCTATATGAATC TACTAGTCAACTAATTTCCATCCTTCTTCCATTTCCATCACTCTTTATAATCATCCACACAATTTTCAATTTCACATTTCAAAAATCCCCCAATAAATCGACAATGGTCTTCTCCACTCCCCAACATCCTCCCACCGCCGATTCCGGCACGACGGCGAAAACCCCATCCACCGGCCTCCGCCGCTCCGTCACAGCTCTAGCAGCTCTCTGTGCCAAAAAAGCCTCCCTACTCACCAAAAAACTTAAATTGAAGCCGAGTCACGACCACCCGAGTCACCCGAGTCCAAGGTCACCGTTGGCTCGCCCGAGGAAGATGCTGAAGACAATTAGCCAATCGGCGATGAATTTGGTTCACAAGAAAAGGACCGGCCGACGGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGGGGCCAGGGTGGGGTATGGCAAAGGGGAATCTTGATGGGGGACAAATGTCAACCGTTGGATTTTTCGGGTGCAATTTATTACGATAGTAACGGACACAAGATGAACGAACCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAATCTCAACCCTAAACCGCTCCCAAACCGTGATGTCATTTTATTATTTTTCTTTTTGTTTAATGTCTTTTTAAATTTGTATTTAGTTGTAAATTTTTTTGGTTAAATTAGATAGATAAATTTAGTCTATTTTTTTTATGTAATATGTGTGTTTATTAACAGTTCATTTTTAGTAGTAAATTAGATTTGAACATATCTCAAACTATCATCTTATTATTAGTCGATGATGTATGATCGTCTATTATTTTTGTAATTAGTAGTGGGTGTAGTGATAATTCGAATTCTCTTCGATTTTATATCTATATGAATC ATGGTCTTCTCCACTCCCCAACATCCTCCCACCGCCGATTCCGGCACGACGGCGAAAACCCCATCCACCGGCCTCCGCCGCTCCGTCACAGCTCTAGCAGCTCTCTGTGCCAAAAAAGCCTCCCTACTCACCAAAAAACTTAAATTGAAGCCGAGTCACGACCACCCGAGTCACCCGAGTCCAAGGTCACCGTTGGCTCGCCCGAGGAAGATGCTGAAGACAATTAGCCAATCGGCGATGAATTTGGTTCACAAGAAAAGGACCGGCCGACGGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGGGGCCAGGGTGGGGTATGGCAAAGGGGAATCTTGATGGGGGACAAATGTCAACCGTTGGATTTTTCGGGTGCAATTTATTACGATAGTAACGGACACAAGATGAACGAACCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTCCTTAGAAAATCTCAACCCTAA MVFSTPQHPPTADSGTTAKTPSTGLRRSVTALAALCAKKASLLTKKLKLKPSHDHPSHPSPRSPLARPRKMLKTISQSAMNLVHKKRTGRREEEEEEEEEEEEEEEEWGQGGVWQRGILMGDKCQPLDFSGAIYYDSNGHKMNEPPLRSPRASPLPGYLLRKSQP Homology
BLAST of PI0005074 vs. ExPASy TrEMBL
Match: A0A5D3DXW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00220 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71 Identity = 146/165 (88.48%), Postives = 155/165 (93.94%), Query Frame = 0
BLAST of PI0005074 vs. ExPASy TrEMBL
Match: A0A0A0LPH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015870 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.2e-70 Identity = 145/165 (87.88%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of PI0005074 vs. ExPASy TrEMBL
Match: A0A5A7USC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003540 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 4.0e-42 Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 0
BLAST of PI0005074 vs. ExPASy TrEMBL
Match: A0A6J1I8S7 (uncharacterized protein LOC111472519 OS=Cucurbita maxima OX=3661 GN=LOC111472519 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 7.5e-41 Identity = 103/164 (62.80%), Postives = 118/164 (71.95%), Query Frame = 0
BLAST of PI0005074 vs. ExPASy TrEMBL
Match: A0A6J1C108 (uncharacterized protein LOC111007369 OS=Momordica charantia OX=3673 GN=LOC111007369 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39 Identity = 100/163 (61.35%), Postives = 121/163 (74.23%), Query Frame = 0
BLAST of PI0005074 vs. NCBI nr
Match: TYK28394.1 (hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71 Identity = 146/165 (88.48%), Postives = 155/165 (93.94%), Query Frame = 0
BLAST of PI0005074 vs. NCBI nr
Match: KGN63795.1 (hypothetical protein Csa_013677 [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70 Identity = 145/165 (87.88%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of PI0005074 vs. NCBI nr
Match: XP_038879173.1 (uncharacterized protein LOC120071149 [Benincasa hispida]) HSP 1 Score: 262.3 bits (669), Expect = 2.8e-66 Identity = 137/162 (84.57%), Postives = 147/162 (90.74%), Query Frame = 0
BLAST of PI0005074 vs. NCBI nr
Match: KAA0058048.1 (hypothetical protein E6C27_scaffold274G003540 [Cucumis melo var. makuwa]) HSP 1 Score: 181.0 bits (458), Expect = 8.2e-42 Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 0
BLAST of PI0005074 vs. NCBI nr
Match: XP_023531310.1 (uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40 Identity = 102/164 (62.20%), Postives = 118/164 (71.95%), Query Frame = 0
BLAST of PI0005074 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17 Identity = 71/172 (41.28%), Postives = 91/172 (52.91%), Query Frame = 0
BLAST of PI0005074 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13 Identity = 66/184 (35.87%), Postives = 94/184 (51.09%), Query Frame = 0
BLAST of PI0005074 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05 Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of PI0005074 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 6.5e-05 Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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