PI0005000 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTCATAAGAAAAGTGTTTTTGGAAGTCAGTAGTTTGTCGTCCCGCTTAGGTTGAACTTTCAGTGGCGCGAATCAGGTAAATGCTCAACCTGCTCTCTCTCCTTTGTAATTCTTTCACTCCACTTTTTTTTAGAATTTCGATTCTACAATCATGGTGCTTCAAGAATCTGAATCCATTACCCATTATTATTGATCGTTTAAGATTACCCTCGGTGGGATTTCCTTTTCGACTTTTTTCCCCCATTTCAATCCATTGTTGAACTCATCATTGATTCCTAGAATTCATGTATTCTCCCCTTTACAATCTTTCTATAACCCCTAGTGTAGTCATTAATCTTTTGAAATTTTCCCTTTTAGTTCACATGCTAGTTCCAACAATTTGTTTCCCTTGGTGGGAATTCATGAGGAATCCCTTTTCCTAGTGGGAAGTTTACTGGATTGAGTATATTAAGGTTTTGAGTTTCAAATTTTACATGAAATGGGTTTAGAATTTTGCTGAAAAGGTAGTTAATTTTATGTTAGATGAGTTAGGTTGGTTTTTTTTTTTTTTTTTTTTTTTTGCTTGGTCTTATGAGGATTTGACAATAGCAGAATTTAAGTGATAGGGGTTAGATTCAAAAGCATTGAATTACTAAGAAACTGTGTAACATGGCAACATGTGACGTGCTATTGTAAGGAATAATGGTTGAAGGATGAATTCTTAATTTTGGAGGACGAGTTTAATTTTTACTCTTATCATTTTATCTTCATTCTAAAGAAATTGTTGATTATTTACTAAGATTTACATGTCTTTCATATGGGATTTGACTTGCAGTAGAGATTAGAGTTCTTTTTGCGAGAAAGAGGATTGTACTGGATGGCTTTAGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACTTGATGAAGCCATCTTCTGAGTTCTTCAAGGATGGGGCTTCGCTTAGAGTTACTGGAAAGTAAAATTTATCTAAATGGAAAAAACTTCTTGTGCTTTCTACAACTTTTCATATGGGCCAAAAAATTTGGGCTTAAACTTGATTGGTGAAATGATTCTCTTGGTAGATTTTGTTTGAATTTGTTTTCCATAACTGTCTGTTTGAAATTTGGGCTGCCTTTATTTTCTTAGCAATGGAATGATCCACTTAAATTTTCTTCTCTGGATGTCCATTATTTTCTTCAAACTAAAAGGCACCAGCATTTGTTGCAGATTTGTATGCAGTTTTTATCTAAAGTTATCATTCACTTTGGGTGACATAATTATATCCTTCAGATTTTTTTTAATAGCAATATTCAATGTAGAATTTCTTGGCTGTTGCAACCTTATCGGATGTTGAAGGGATAGATTTCCTTGGCTATTGTGAGTGTTCATTGTCTTATATGCATCAAACAGAAACCAGATATTTAAAATCCATAGCTAAGGCACGGACCTACCATTTAATCGAATCTTGAATAAACTTTGAAATGTAATCTGATGGTATCATCACATAATTCTCCTCTTACTTGATGTGACAACAGATTATCCGTTGATTACTTTTAATAATGGAAGCTAATCTTGATGTTTAATAGTTCTTTATGTATATGCAACTGTTCTCTTGATTTATTGCTATGACATAGATGACTGAAATACTTTTGAATCTATGAACTGTTTCCTTAATTCTTTTTGTGACAATGAAAATAATTAACATCTGTTCTTCAAGACAGATTAGTGGAGTATTCTGTAGAGACAGCCATTGCCATAATTGTGGATGGAAATGTTAACTTGAAGATCGACACACAGCATCTAAGAGAGCTTAGCATTCGCATTGGTTCCATATATCAATTTATTGGTGAACTACTTGTTCAGTCAGATAATGAGGTGAAATACCATTTAATTAGGACCACCTTTCTCTTTGTCACACCGTTCACACACAAGAGCCTTAAATGATGCTTTATTTCCAGGCAATTTTGCAGGCACGTGTTGGCAGGAATGTTGATGGCATTGACCTCAACCTTTATCATCAGTCTTTGCAGCTGTTAAGACAATTTCAAGCTGATCACTTGAACAAGAGAACAAATTAGTTCACTTTTTTCCTTGAATGAATTTCTCATGTGTTTCACCGACAAAGGTAATCTAGCTAATTGTTATCTTTGAAATGTCAAAAGTACGAACGACTCTTCACTTTATTCTATTTTACTCTGTAAAGAAAATCTCAGTAGGTAAACTACCTTTTTCACTAATATCATGAGTTGAATGAATGTTTTGCTGAA AAAATTCATAAGAAAAGTGTTTTTGGAAGTCAGTAGTTTGTCGTCCCGCTTAGGTTGAACTTTCAGTGGCGCGAATCAGTAGAGATTAGAGTTCTTTTTGCGAGAAAGAGGATTGTACTGGATGGCTTTAGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACTTGATGAAGCCATCTTCTGAGTTCTTCAAGGATGGGGCTTCGCTTAGAGTTACTGGAAAATTAGTGGAGTATTCTGTAGAGACAGCCATTGCCATAATTGTGGATGGAAATGTTAACTTGAAGATCGACACACAGCATCTAAGAGAGCTTAGCATTCGCATTGGTTCCATATATCAATTTATTGGTGAACTACTTGTTCAGTCAGATAATGAGGCAATTTTGCAGGCACGTGTTGGCAGGAATGTTGATGGCATTGACCTCAACCTTTATCATCAGTCTTTGCAGCTGTTAAGACAATTTCAAGCTGATCACTTGAACAAGAGAACAAATTAGTTCACTTTTTTCCTTGAATGAATTTCTCATGTGTTTCACCGACAAAGGTAATCTAGCTAATTGTTATCTTTGAAATGTCAAAAGTACGAACGACTCTTCACTTTATTCTATTTTACTCTGTAAAGAAAATCTCAGTAGGTAAACTACCTTTTTCACTAATATCATGAGTTGAATGAATGTTTTGCTGAA ATGGCTTTAGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACTTGATGAAGCCATCTTCTGAGTTCTTCAAGGATGGGGCTTCGCTTAGAGTTACTGGAAAATTAGTGGAGTATTCTGTAGAGACAGCCATTGCCATAATTGTGGATGGAAATGTTAACTTGAAGATCGACACACAGCATCTAAGAGAGCTTAGCATTCGCATTGGTTCCATATATCAATTTATTGGTGAACTACTTGTTCAGTCAGATAATGAGGCAATTTTGCAGGCACGTGTTGGCAGGAATGTTGATGGCATTGACCTCAACCTTTATCATCAGTCTTTGCAGCTGTTAAGACAATTTCAAGCTGATCACTTGAACAAGAGAACAAATTAG MALAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEAILQARVGRNVDGIDLNLYHQSLQLLRQFQADHLNKRTN Homology
BLAST of PI0005000 vs. ExPASy Swiss-Prot
Match: Q6NME7 (CST complex subunit TEN1 OS=Arabidopsis thaliana OX=3702 GN=TEN1 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-30 Identity = 72/123 (58.54%), Postives = 96/123 (78.05%), Query Frame = 0
BLAST of PI0005000 vs. ExPASy TrEMBL
Match: A0A1S3BY71 (CST complex subunit TEN1 OS=Cucumis melo OX=3656 GN=LOC103494489 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of PI0005000 vs. ExPASy TrEMBL
Match: A0A0A0LFY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G032760 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of PI0005000 vs. ExPASy TrEMBL
Match: A0A5D3B9F0 (CST complex subunit TEN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001380 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 6.3e-56 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of PI0005000 vs. ExPASy TrEMBL
Match: A0A6J1HSH0 (CST complex subunit TEN1-like OS=Cucurbita maxima OX=3661 GN=LOC111465725 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of PI0005000 vs. ExPASy TrEMBL
Match: A0A6J1DRX0 (CST complex subunit TEN1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023280 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of PI0005000 vs. NCBI nr
Match: XP_008453918.1 (PREDICTED: CST complex subunit TEN1 [Cucumis melo] >XP_008453921.1 PREDICTED: CST complex subunit TEN1 [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of PI0005000 vs. NCBI nr
Match: XP_038889106.1 (CST complex subunit TEN1 isoform X2 [Benincasa hispida] >XP_038889107.1 CST complex subunit TEN1 isoform X2 [Benincasa hispida] >XP_038889108.1 CST complex subunit TEN1 isoform X2 [Benincasa hispida]) HSP 1 Score: 234.2 bits (596), Expect = 6.2e-58 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of PI0005000 vs. NCBI nr
Match: XP_038889105.1 (CST complex subunit TEN1 isoform X1 [Benincasa hispida]) HSP 1 Score: 234.2 bits (596), Expect = 6.2e-58 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of PI0005000 vs. NCBI nr
Match: XP_004144770.1 (CST complex subunit TEN1 isoform X1 [Cucumis sativus] >XP_004144771.1 CST complex subunit TEN1 isoform X1 [Cucumis sativus] >XP_031736409.1 CST complex subunit TEN1 isoform X1 [Cucumis sativus] >KGN60970.1 hypothetical protein Csa_021134 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57 Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of PI0005000 vs. NCBI nr
Match: KAA0048044.1 (CST complex subunit TEN1 [Cucumis melo var. makuwa] >TYJ96492.1 CST complex subunit TEN1 [Cucumis melo var. makuwa]) HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55 Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of PI0005000 vs. TAIR 10
Match: AT1G56260.1 (unknown protein; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31 Identity = 72/123 (58.54%), Postives = 96/123 (78.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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