PI0004971 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACGGACGCGGCTGCGGAGAACAGAACGAATATCTGTACTATGAAGCACCTACAAACGTATCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTCAGGGCAACCTAGAGTTCAGAGTCGACGATGACAACCAGCTCGAAATTGACGAAGTCCGGGTTGTGTAA ATGGACACGGACGCGGCTGCGGAGAACAGAACGAATATCTGTACTATGAAGCACCTACAAACGTATCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTCAGGGCAACCTAGAGTTCAGAGTCGACGATGACAACCAGCTCGAAATTGACGAAGTCCGGGTTGTGTAA ATGGACACGGACGCGGCTGCGGAGAACAGAACGAATATCTGTACTATGAAGCACCTACAAACGTATCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTCAGGGCAACCTAGAGTTCAGAGTCGACGATGACAACCAGCTCGAAATTGACGAAGTCCGGGTTGTGTAA MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV Homology
BLAST of PI0004971 vs. ExPASy TrEMBL
Match: A0A5D3C2V9 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001060 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.0e-13 Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of PI0004971 vs. ExPASy TrEMBL
Match: A0A5A7VF64 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00200 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0004971 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.9e-11 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of PI0004971 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.0e-05 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of PI0004971 vs. ExPASy TrEMBL
Match: A0A5D3CD18 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00530 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of PI0004971 vs. NCBI nr
Match: KAA0040602.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK05644.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12 Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of PI0004971 vs. NCBI nr
Match: KAA0066693.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK27843.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0004971 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of PI0004971 vs. NCBI nr
Match: KAA0040939.1 (stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] >TYK20318.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of PI0004971 vs. NCBI nr
Match: TYK08229.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 4.1e-04 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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