PI0004864 (gene) Melon (PI 482460) v1

Overview


Name	PI0004864
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	photosystem II 5 kDa protein, chloroplastic
Location	chr05: 22015442 .. 22016182 (+)
RNA-Seq Expression	PI0004864
Synteny	PI0004864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAATCAACATGAACCTTCAATCACTTCACTTCCCCACACTCCCAAACATAACTATATCCTATTTCTCCTTCACCCAATTCCTCAACTACCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCGATGACAGCTTCCTTCCTTCCCGCCACCACTGCCAAGCAACCCTCCGCCACCGCCCGTCGAGCCCTTATTGTTGCCAAAGCCTCAACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGTAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCAGCAGCGACCTTGGCGAAGGTAGCGATGGCGGATGAGCCGGCTCGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTGAAGAGATGTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTTCATTTGGTCTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCTTTTTTTCTTGTTTTTGCCTTTCTCAACCTCAAACTTCATTCAAGTAATTTTTCTTCACATTTTATCAATGTTGTTGATGATCATAACACTATACAAACACCACATTTGATAATAACTCACTCAAAGTAGTTGCAAATTAGAACTTTCA

mRNA sequence

AAAGAATCAACATGAACCTTCAATCACTTCACTTCCCCACACTCCCAAACATAACTATATCCTATTTCTCCTTCACCCAATTCCTCAACTACCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCGATGACAGCTTCCTTCCTTCCCGCCACCACTGCCAAGCAACCCTCCGCCACCGCCCGTCGAGCCCTTATTGTTGCCAAAGCCTCAACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGTAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCAGCAGCGACCTTGGCGAAGGTAGCGATGGCGGATGAGCCGGCTCGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTGAAGAGATGTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTTCATTTGGTCTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCTTTTTTTCTTGTTTTTGCCTTTCTCAACCTCAAACTTCATTCAAGTAATTTTTCTTCACATTTTATCAATGTTGTTGATGATCATAACACTATACAAACACCACATTTGATAATAACTCACTCAAAGTAGTTGCAAATTAGAACTTTCA

Coding sequence (CDS)

ATGGCTTCCATGGCGATGACAGCTTCCTTCCTTCCCGCCACCACTGCCAAGCAACCCTCCGCCACCGCCCGTCGAGCCCTTATTGTTGCCAAAGCCTCAACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGTAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCAGCAGCGACCTTGGCGAAGGTAGCGATGGCGGATGAGCCGGCTCGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGA

Protein sequence

MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK

Homology

[Close]

BLAST of PI0004864 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-15
Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASM MTA+F PA  AK PSAT  R L V +ASTS+ T   +LEVK  +  S   RR+L+
Sbjct: 1   MASMTMTATFFPA-VAKVPSATGGRRLSVVRASTSDNTP--SLEVK--EQSSTTMRRDLM 60

Query: 61  AAAVTVAAATLAKVAMA--DEPARGSPEAKQKYAPICVTMPTARICR 106
             A   A  +LAKVAMA  +EP RG+  AK+KYA +CVTMPTA+ICR
Sbjct: 61  FTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

[Close]

BLAST of PI0004864 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.1e-13
Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 1   MASMAMTASFLPAT--TAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRE 60
           MAS+ MT SFL  T  T   P  T RR L+VA A+   +  +V +  +  K E   GRRE
Sbjct: 1   MASITMTTSFLSTTNLTKGSPRITQRR-LVVANAAKGAQVESVQMSGER-KTEGNNGRRE 60

Query: 61  LVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICR 106
           ++ AA   A  ++A VA A EP RGS EAK+ YAP+CVTMPTARICR
Sbjct: 61  MMFAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICR 104

[Close]

BLAST of PI0004864 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12
Identity = 53/109 (48.62%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 1   MASMAMTASFLPATT---AKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRR 60
           MAS+ M +SFL  +T   AK PSA  RR +++ KA    E    N+ +   +     GRR
Sbjct: 1   MASITMMSSFLGGSTVAPAKVPSAN-RRGVVMVKAMHEGEN---NVVISKNEESKNSGRR 60

Query: 61  ELVAAAVTVAAATLAKVAMAD-EPARGSPEAKQKYAPICVTMPTARICR 106
           EL  A    AA ++AK AMAD EP RG+PEAK+KY+ +CVT PTARICR
Sbjct: 61  ELFFAMAAAAACSVAKTAMADEEPKRGTPEAKKKYSSVCVTNPTARICR 105

[Close]

BLAST of PI0004864 vs. ExPASy TrEMBL
Match: A0A5A7TID9 (Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00980 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLP T  KQPSAT RRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV
Sbjct: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of PI0004864 vs. ExPASy TrEMBL
Match: A0A1S3BML8 (photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491503 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLP T  KQPSAT RRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV
Sbjct: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of PI0004864 vs. ExPASy TrEMBL
Match: A0A0A0KIB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.3e-40
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLP T  KQPS+TARR LIVAKASTSN+ SNVN+EVKNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of PI0004864 vs. ExPASy TrEMBL
Match: A0A6J1J874 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484352 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-30
Identity = 84/110 (76.36%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 60
           MASM++TASFLP T  +  +A ARRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 61  RELVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           RELVAAAVTVAAAT AK AMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of PI0004864 vs. ExPASy TrEMBL
Match: A0A6J1FY72 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449001 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-30
Identity = 84/110 (76.36%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 60
           MASM++TASFLP T  +  +A ARRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 61  RELVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           RELVAAAVTVAAAT AK AMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of PI0004864 vs. NCBI nr
Match: XP_008449703.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA0041421.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa] >TYJ96132.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLP T  KQPSAT RRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV
Sbjct: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of PI0004864 vs. NCBI nr
Match: XP_004143237.1 (photosystem II 5 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLP T  KQPS+TARR LIVAKASTSN+ SNVN+EVKNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of PI0004864 vs. NCBI nr
Match: XP_038901593.1 (photosystem II 5 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASMAMTASFLPAT  KQPS  ARRAL+VAKASTS++ SNVNLE+KNVKVE+RQGRRELV
Sbjct: 1   MASMAMTASFLPATANKQPSTAARRALVVAKASTSSDASNVNLEIKNVKVENRQGRRELV 60

Query: 61  AAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           AAAVTVAAATLAK AMADEP RGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPPRGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of PI0004864 vs. NCBI nr
Match: XP_022944588.1 (photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 4.6e-30
Identity = 84/110 (76.36%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 60
           MASM++TASFLP T  +  +A ARRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 61  RELVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           RELVAAAVTVAAAT AK AMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of PI0004864 vs. NCBI nr
Match: KAG6570402.1 (Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010275.1 Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 88/113 (77.88%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPS---ATARRALIVAKASTS----NETSNVNLEVKNVKVESR 60
           MASM++TASFLP  TA QPS   A ARRAL V KASTS    +  SN NLE+KNVKVES 
Sbjct: 1   MASMSITASFLP-FTATQPSAAAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESS 60

Query: 61  QGRRELVAAAVTVAAATLAKVAMADEPARGSPEAKQKYAPICVTMPTARICRK 107
           QGRRELVAAAVTVAAAT AK AMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  QGRRELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 112

[Close]

BLAST of PI0004864 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T )

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQPSATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 60
           MASM MTA+F PA  AK PSAT  R L V +ASTS+ T   +LEVK  +  S   RR+L+
Sbjct: 1   MASMTMTATFFPA-VAKVPSATGGRRLSVVRASTSDNTP--SLEVK--EQSSTTMRRDLM 60

Query: 61  AAAVTVAAATLAKVAMA--DEPARGSPEAKQKYAPICVTMPTARICR 106
             A   A  +LAKVAMA  +EP RG+  AK+KYA +CVTMPTA+ICR
Sbjct: 61  FTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

[Close]

BLAST of PI0004864 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-16
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 1   MASMAMTASFLPATTAKQP---SATARRALIVAKASTSNETSNVNLEVKNVKVESRQGRR 60
           MASM MT+SFLP T +  P   S+ +RR+L V KAS S  T+  +LE K  + +S + RR
Sbjct: 1   MASMTMTSSFLP-TVSNLPANISSNSRRSLTVVKASGSENTT--SLENKK-QEQSMKMRR 60

Query: 61  ELVAAAVTVAAATLAKVAMA-DEPARGSPEAKQKYAPICVTMPTARICR 106
           +LV  A   A  +LAKVAMA DEP RG+  AK+KYAP+CVTMPTA+ICR
Sbjct: 61  DLVFTAAAAAVCSLAKVAMADDEPKRGTEAAKKKYAPVCVTMPTAKICR 105

The following BLAST results are available for this feature:

BLAST of PI0004864 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39195	2.0e-15	56.07	Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
P31336	9.1e-13	50.47	Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSB...	[more]
B3EWI4	1.6e-12	48.62	Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1	[more]

BLAST of PI0004864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TID9	1.7e-41	95.28	Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BML8	1.7e-41	95.28	photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A0A0KIB2	5.3e-40	91.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1	[more]
A0A6J1J874	2.2e-30	76.36	photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FY72	2.2e-30	76.36	photosystem II 5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of PI0004864 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449703.1	3.4e-41	95.28	PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA004142...	[more]
XP_004143237.1	1.1e-39	91.51	photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]	[more]
XP_038901593.1	2.7e-38	88.68	photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022944588.1	4.6e-30	76.36	photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1...	[more]
KAG6570402.1	1.8e-29	77.88	Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]

BLAST of PI0004864 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21055.1	1.4e-16	56.07	photosystem II subunit T	[more]
AT1G51400.1	3.1e-16	55.05	Photosystem II 5 kD protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040296	Photosystem II 5kDa protein, chloroplastic	PANTHER	PTHR34940	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 1..106
None	No IPR available	PANTHER	PTHR34940:SF4	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004864.1	PI0004864.1	mRNA