PI0004857 (gene) Melon (PI 482460) v1

Overview


Name	PI0004857
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr07: 14377249 .. 14377769 (+)
RNA-Seq Expression	PI0004857
Synteny	PI0004857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCCCAAGAACTAGACAAATTGATCAAGATTGAGAAAGGGTTGCTACCGTTTAGGGGCGCATTGCCCGAATTTCTCTGCGGACCCATTAGAAAATTCAAGTGAGAAACATTCTTTGAAGGAAAGACTAAGGTGAGACTAGACGTGGTCAATATGTTTTATGTGGCGAAGTATCATCCGCGAGAGTCCTACGCAATTGTGAAAGCGAGAGGGTATCCTTTAGCACGGAGGAAATCAATGACTTATATGACCTCCCAAATGATGCGGATGCCTACCCTGGCCAGTCAATCATCACCGCGGTCATCGAAGGGCTCGCGAAGAAAGTATTGAAAACAATTGCGTGGCTAGGCACAAAATGGAAAAAGACACCTACGGGGAGGCTGCAGTTATACCCACACCAACTGACAACAAAGCCGAATGTGTTGTTCTTTATCAAGAAAAAGTTCCTCCCTGTGCGACATGACAACATGGTGCAAATTGAGTACGCACTGCTCCTCTATTTAATAATGACAAAGTAG

mRNA sequence

ATGAGTGCCCAAGAACTAGACAAATTGATCAAGATTGAGAAAGGGTTGCTACCGTTTAGGGGCGCATTGCCCGAATTTCTCTGCGGACCCATTAGAAAATTCAAACGTGGTCAATATGTTTTATGTGGCGAAGTATCATCCGCGAGAGTCCTACGCAATTGTGAAAGCGAGAGGGTATCCTTTAGCACGGAGGAAATCAATGACTTATATGACCTCCCAAATGATGCGGATGCCTACCCTGGCCAGTCAATCATCACCGCGGTCATCGAAGGGCTCGCGAAGAAAGTATTGAAAACAATTGCGTGGCTAGGCACAAAATGGAAAAAGACACCTACGGGGAGGCTGCAGTTATACCCACACCAACTGACAACAAAGCCGAATGTGTTGTTCTTTATCAAGAAAAAGTTCCTCCCTGTGCGACATGACAACATGGTGCAAATTGAGTACGCACTGCTCCTCTATTTAATAATGACAAAGTAG

Coding sequence (CDS)

ATGAGTGCCCAAGAACTAGACAAATTGATCAAGATTGAGAAAGGGTTGCTACCGTTTAGGGGCGCATTGCCCGAATTTCTCTGCGGACCCATTAGAAAATTCAAACGTGGTCAATATGTTTTATGTGGCGAAGTATCATCCGCGAGAGTCCTACGCAATTGTGAAAGCGAGAGGGTATCCTTTAGCACGGAGGAAATCAATGACTTATATGACCTCCCAAATGATGCGGATGCCTACCCTGGCCAGTCAATCATCACCGCGGTCATCGAAGGGCTCGCGAAGAAAGTATTGAAAACAATTGCGTGGCTAGGCACAAAATGGAAAAAGACACCTACGGGGAGGCTGCAGTTATACCCACACCAACTGACAACAAAGCCGAATGTGTTGTTCTTTATCAAGAAAAAGTTCCTCCCTGTGCGACATGACAACATGGTGCAAATTGAGTACGCACTGCTCCTCTATTTAATAATGACAAAGTAG

Protein sequence

MSAQELDKLIKIEKGLLPFRGALPEFLCGPIRKFKRGQYVLCGEVSSARVLRNCESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTGRLQLYPHQLTTKPNVLFFIKKKFLPVRHDNMVQIEYALLLYLIMTK

Homology

[Close]

BLAST of PI0004857 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 67/124 (54.03%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 38   QYVLCGEVSSAR-VLRNCESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKV 97
            ++VLCG++   R      E E+V F+TEEIN+LYDLPND  AYPGQ +I    EG AKK+
Sbjct: 1210 EHVLCGKIPFGRESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKI 1269

Query: 98   LKTIAWLGTKWKKTPTGRLQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYL 157
            +K I W       TPT RLQL+PHQLT + NV LFFIKKK  P  HD+ +  EYAL+LY 
Sbjct: 1270 IKLIVWPEADCTSTPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYC 1329

Query: 158  IMTK 160
            I  K
Sbjct: 1330 INAK 1333

[Close]

BLAST of PI0004857 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 67/124 (54.03%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 38  QYVLCGEVSSAR-VLRNCESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKV 97
           ++VLCG++   R      E E+V F+TEEIN+LYDLPND  AYPGQ +I    EG AKK+
Sbjct: 49  EHVLCGKIPFGRESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKI 108

Query: 98  LKTIAWLGTKWKKTPTGRLQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYL 157
           +K I W       TPT RLQL+PHQLT + NV LFFIKKK  P  HD+ +  EYAL+LY 
Sbjct: 109 IKLIVWPEADCTSTPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYC 168

Query: 158 IMTK 160
           I  K
Sbjct: 169 INAK 172

[Close]

BLAST of PI0004857 vs. ExPASy TrEMBL
Match: A0A5D3DES7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00570 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.4e-22
Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 55  ESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTGR 114
           E ++VSF+ EEIN+LY L ND D+YP QS+I    +G ++ +++ IAWLG  W +T T  
Sbjct: 21  ERKKVSFTMEEINELYGLLNDLDSYPSQSLIAEPTKGDSRMIIQLIAWLGAGWTRTTTRS 80

Query: 115 LQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYLIMTK 160
           LQLYPHQLTT+ NV L FIKKK +P+ +D+ V IEY LLLY  M K
Sbjct: 81  LQLYPHQLTTEANVWLLFIKKKIIPMCYDSTVPIEYMLLLYCKMAK 126

[Close]

BLAST of PI0004857 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.5e-22
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 1   MSAQELDKLIKIEKGLLPFRGALPEFLCGPIRKFKRGQYVLCGEVSSARVLRNCESERVS 60
           MS Q+LDKLIKIEKGLLPF G L +FL GPI+  K   + +             + ++V 
Sbjct: 112 MSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFM-------------DEKKVP 171

Query: 61  FSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTG 114
           F+ EEIN+LYDLPN  DAYPGQ +I    EG  KK++K I WLG  W  TPTG
Sbjct: 172 FTVEEINELYDLPNGLDAYPGQRLIADPREGDTKKIIKLIVWLGADWTITPTG 211

[Close]

BLAST of PI0004857 vs. ExPASy TrEMBL
Match: A0A5D3CBF2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00020 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.2e-20
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 60  SFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTGRLQLYP 119
           SF+ + IN LY+LP+DA AYP Q      IE L K++LK I WLG  W++ PTGRLQLYP
Sbjct: 57  SFNLKAINKLYELPDDAKAYPCQPFDIEPIEVLVKRILKVIVWLGADWERMPTGRLQLYP 116

Query: 120 HQLTTKPNV-LFFIKKKFLPVRHDNMVQI 148
           HQLT + NV LFFIKKK  P RHD+  Q+
Sbjct: 117 HQLTIEANVWLFFIKKKIFPTRHDSTCQL 145

[Close]

BLAST of PI0004857 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-25
Identity = 67/124 (54.03%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 38   QYVLCGEVSSAR-VLRNCESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKV 97
            ++VLCG++   R      E E+V F+TEEIN+LYDLPND  AYPGQ +I    EG AKK+
Sbjct: 1210 EHVLCGKIPFGRESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKI 1269

Query: 98   LKTIAWLGTKWKKTPTGRLQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYL 157
            +K I W       TPT RLQL+PHQLT + NV LFFIKKK  P  HD+ +  EYAL+LY 
Sbjct: 1270 IKLIVWPEADCTSTPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYC 1329

Query: 158  IMTK 160
            I  K
Sbjct: 1330 INAK 1333

[Close]

BLAST of PI0004857 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-25
Identity = 67/124 (54.03%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 38  QYVLCGEVSSAR-VLRNCESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKV 97
           ++VLCG++   R      E E+V F+TEEIN+LYDLPND  AYPGQ +I    EG AKK+
Sbjct: 49  EHVLCGKIPFGRESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKI 108

Query: 98  LKTIAWLGTKWKKTPTGRLQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYL 157
           +K I W       TPT RLQL+PHQLT + NV LFFIKKK  P  HD+ +  EYAL+LY 
Sbjct: 109 IKLIVWPEADCTSTPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYC 168

Query: 158 IMTK 160
           I  K
Sbjct: 169 INAK 172

[Close]

BLAST of PI0004857 vs. NCBI nr
Match: TYK22187.1 (hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 114.4 bits (285), Expect = 9.1e-22
Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 55  ESERVSFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTGR 114
           E ++VSF+ EEIN+LY L ND D+YP QS+I    +G ++ +++ IAWLG  W +T T  
Sbjct: 21  ERKKVSFTMEEINELYGLLNDLDSYPSQSLIAEPTKGDSRMIIQLIAWLGAGWTRTTTRS 80

Query: 115 LQLYPHQLTTKPNV-LFFIKKKFLPVRHDNMVQIEYALLLYLIMTK 160
           LQLYPHQLTT+ NV L FIKKK +P+ +D+ V IEY LLLY  M K
Sbjct: 81  LQLYPHQLTTEANVWLLFIKKKIIPMCYDSTVPIEYMLLLYCKMAK 126

[Close]

BLAST of PI0004857 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 1   MSAQELDKLIKIEKGLLPFRGALPEFLCGPIRKFKRGQYVLCGEVSSARVLRNCESERVS 60
           MS Q+LDKLIKIEKGLLPF G L +FL GPI+  K   + +             + ++V 
Sbjct: 112 MSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFM-------------DEKKVP 171

Query: 61  FSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTG 114
           F+ EEIN+LYDLPN  DAYPGQ +I    EG  KK++K I WLG  W  TPTG
Sbjct: 172 FTVEEINELYDLPNGLDAYPGQRLIADPREGDTKKIIKLIVWLGADWTITPTG 211

[Close]

BLAST of PI0004857 vs. NCBI nr
Match: KAA0062748.1 (hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa] >TYK08825.1 hypothetical protein E5676_scaffold87G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-19
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 60  SFSTEEINDLYDLPNDADAYPGQSIITAVIEGLAKKVLKTIAWLGTKWKKTPTGRLQLYP 119
           SF+ + IN LY+LP+DA AYP Q      IE L K++LK I WLG  W++ PTGRLQLYP
Sbjct: 57  SFNLKAINKLYELPDDAKAYPCQPFDIEPIEVLVKRILKVIVWLGADWERMPTGRLQLYP 116

Query: 120 HQLTTKPNV-LFFIKKKFLPVRHDNMVQI 148
           HQLT + NV LFFIKKK  P RHD+  Q+
Sbjct: 117 HQLTIEANVWLFFIKKKIFPTRHDSTCQL 145

The following BLAST results are available for this feature:

BLAST of PI0004857 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U806	1.1e-25	54.03	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	1.1e-25	54.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DES7	4.4e-22	54.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TVC2	7.5e-22	51.33	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CBF2	9.2e-20	58.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0004857 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049609.1	2.3e-25	54.03	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	2.3e-25	54.03	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]
TYK22187.1	9.1e-22	54.72	hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]	[more]
KAA0045335.1	1.5e-21	51.33	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0062748.1	1.9e-19	58.43	hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa] >TYK0882...	[more]

BLAST of PI0004857 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004857.1	PI0004857.1	mRNA