PI0004785 (gene) Melon (PI 482460) v1

Overview
NamePI0004785
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Locationchr01: 13676747 .. 13683260 (-)
RNA-Seq ExpressionPI0004785
SyntenyPI0004785
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTACATTGCTCACTTCTTTTGTACAAGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAAGGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATTTCTTTCCAAAATGAAATGAAGCAACAAATTTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCTAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTACCCTTCTAGTAGATGAAAATAAGAAAAATGAAGAAAATTTAGAAAACAACGCCTCTTCTTCTTCTTCAAAAGGTAAAACTAAAATTTCTGATTTTTCCCCTTTTGTTCCTAACGCTCATTTTCCTTCCAGATTGGCCCCTAAAAAGAAAGAAACACCAAAGGAAGAAGAACTGCTAAAGATGTTCAGGAAAGTGCAAATCAACCTACCTCTGCTCGACGCGATCCAACAAGTCCCGAGGTATGCGAAGTTCTTAAAGGAATTATGCACAAACAAAAGGAAAATCAAGGAGAAGGCAACGGTAAGTCATAACGTCTCTACTTTATTAAAAACTTCAATACCTGCAAAGCAAAACGACCCAGGTATGTTTTCTCTTCCTTGTATTATAGGAAAGAGGCAAATTTCAAGTGCTATGTTAGACTTAGGAGCTTCCATCAATGTCATGCCATATTCTGTTTTTAAAGATCTTGAATTAAATAATTTGCAAAAGACAAATGTATGCATTCAACTTGCTGATAGATCCTTTATATCACCGCTAGGAATAGTTGAAGATGTGCTAGTAAAAGTAGACAAATTAATATTTCCTGCGGATTTTACATTCTTGAAATGAATGATGCATGTATAAAGCCTTCCCATTCAATTCTTCTAGGTAGACCTTTCCTTAAGACTGCTAAAGCTATCATAGATGTAGATAAAGGTTGCCTAAGTGTAGAATTTGATGGAGACATAGTGACATTTAATATTTTTGAATCTATGAAATTTCCTGAAGAATGCTTCTCTGTATGCTCCTTACTATTGCATGAAAATTTTGAACAAATTCCTATAATAGAACAATTTGCTAATCTAGACTTGGAAGAAATTGAAGATGATATTTGTTTGCATGAATTTAATAAAGAGGAAGAAATTGTAGAAGTAGAAAACAATGAAGAAATAGACCTTGAAGGAATAGATCCTAACTCAATTTCTTTTTCTCCACAGGAACCAGGGATCGAGCTCAAGACTCTCCCCCCAAACCTGAAGTACGTATTCTTAGGAGAAAAGAATACGAGTCCTGTAATAATTTCAAGGGAACTACATCAAGACCAAGGAGAAAAGCCGATCAAAGTCTTGAAGAATAAAAGAAAAGCAATAGGATGGACTTTGGAAGATCTCAAAGGTATTTCCCCTTCTTTTTGCACTCATAGAATCATTCTAGAGGAAGGAGCCAAAGACAAAGTCCAACCACAAAGGAAGCTAAACCCTATCTTAAGAGATGTCGTACTCAAAGAAATACTCAAGCTCAAAGACGCTGGGATCATCTACCCCGTTCCTGACAGCACTTGGGTAAGTCCGATCCACGTTGTGCCAAAAAAGACGAGAATGACGGTAGTAGAGAACGAAAAAGGCGAAATGATCCCAACTCGAGTTCAGAACGGATGGCGAATGTGCATCGACTACCGCAAATTAAATGAGGTAACAAAGAAAGATCACTTTCCTTTACCTTTTCTAGATCAAATGATAGAAAGATTAGCTGGTAAGTCATATTTCTGTTTTCTTGATGGCTTTTCTGGATTTTATCAAATACCAATTGCATGCGAAGATCAAAGTAAAACAACTTTTACATGCGATTACGGTACTTATGCATTTAGACGTATGCCATTTGGATTATGTAATGCACCTGGCACATTCCAACGTTGCATGATGAGTATATTTTCTGATTTTATAGAAAAATGTATAGAAGTCTTTATGGATGATTTCACTGTGTATGGTGATAATTTCGATGCATGCTTGAACAGTTTAGAACAAATTCTAAATAGATGCATAAAACCAACTTGGTGCTTAACTATGAAAAATGTCATTTTATGGTTTCTCATGGCATAGTTTTAGGACATCTAGTATCTTCAAAAGGAATAGAAGTTGACAAAGCAAAAATAGATATTATTCAAAAATTGCCTTATCCTAAATGCTTAAAAGATGTTAGATCATTTTTAGGATCGGCCGGATTTTATAGAAGATTTATTAAAGATTTCTCTAGAATTGCTTTACCACTAACTTCTCTTCTTCAGAAAGATGTGCCTTTTATAATAGATGACAAATGCAAGCAAGCATTTGATGAGCTAAAATCAAGGTTAGTATCTACTCCTATACTTCAATCTCCTAACTGGAATTTACCTTTCGAAATCATGTGCGATGCTAGCAACTTAGCATTAGGAGCAGTACTAGGACAAAGAGTAGATAAGAAATTCATGCCATTTATTATGCATCTAGAACACTTAATCAAGCACAATCAAATTACACCACCACATAAAAAGAATTTCTTGCAATAGTCTTCGCTTTAGACAAATTTAGAAGCTATGTGATAGGCTCACCAATCATCATTTACACTGACCACGCCGCAGTTAGGTACTTAGTTTCTAAGAAAGAATCAAAACCTAGGCTAGTTAGATGGGTTTTACTTCTTCAAGAATTCAACCTAACAATTAAAGATAGAAAAGGAGCCAACAACGCCATAGCAGATCACCTAAGCAGAATAGAGCAAGAACCTGAAAATTCACCCATTAGAGAAGACTTCCCTGACGAGCATCTTTTCCAAACTGACATCTCAACACCATGGTACGCCGACCTTGTGAATTTCATAACAACAGGTAACTATCCCCTGACTTTTCTTTTTCTCAAAAATCAAAATTACGTAGTGATGCCAAATATTACTTCTGGGAATCTCCATTCCTTTGGAAATATTGTTCTGATCAAGTAATTAGAAAATGTGTACCTGAGCATGAATTTAATTCAATTCTTTTATTTTGTCATTCTCATGCATGCGGAGGACACTTTAGTCCAAAAAGAACTGCTAGAAAAATTTTAGATAGTGGATTTTTCTGGAAAACACTATGATTCATATAAATTCTGCAAAGCATGTGAAAACTGTCAAAGAACTGGATCTTTATCTAGGAGAAATGAAATGCCTTTAAATCCAATCTTAACTTGTGAATTTTTTGACATTTGGGGCATGGATTTCATGGGTCCCTTTCCTCCTTCACATGGATATCTGTACATTTTACTAGCAGTAGATTATGTATCGAAGTGGGTCGAAGCAATCCCCACTAGGACTAATGATTCTTCCACTGTTTCAGGATTTCTCATTTCTAATATCTTTTCTAGATTCGGCATCCCTCGTGCAATCATAAGCGACCAAGGAACTCACTTTTGCAATAGAACCATTGAGCGCTAATGAGAAAATACGGAGTCCACCACCGCGTTTCAACTCCGTATCATCCTCAAGCCAATGGACAAGCAGAAGCCTCAAATAAGGAAATCAAGAACATCTTGGAGAAAACAGTCAACACAAGTAGAAAAGATTGGAGCACACGCTTGAACGATGCATTGTGGGCATACCGAACTGCCTACAAAACTCCAATTGGTACTTCTCCATTTAAACTTGTGTTTGGTAAGCCTTGCCATTTACTTGTAGAAATAGAACATAAAGCATATTGGGCAGTTAGGCAATGCAATTATAATCTCCTAGATGCTAAAAATAAAAGATTCCTTGACATGCTAGAATTAGAAGAATTAAGATTAGAAGCATATGAACTCTAGGATTTACAAAGAAAAGACTAAGCTTTTGCATGATAAGAAAATCCTTAGAAAACAATTTTCAATTGGACAAAAAGTGCTTCTTTACAATTCTTCTATCAATTTAATGCCTGGGAAATTAAAATCTAGATGGATAGGACCTTTTGTTATTTCTGACTTTTCTACCTTTGGCGTAGTTTCCATTAAAAGTTTACAAACAGGAAAAATTTTCAAAGTCAATGGGCATAGACTTAAAATCTTTCATGAAGGAGAGACCGCTCAACAAAATTCAATAGAAATCCTCACTCTTCCTTTCTACAACTAGCCCGAAAGCACGGTCGAGCTACGACCTTAAAAACTTGCGCTTCTTGGAGGCAGCCAGGCGTCAAATTCTTTAATGCTTTCTGTCTTTACTTTCTTTAAATTCTGTCTTTAAATTTCTGCATTTAATAAATCTAATAGACTTTCCAATTTTTCTTACACAGGAAATTCTTAAACAATTCCACAATGGAGGTATGAATCAAAGAATCAACAAGGCAATAAACAACTTTGCTTGAAAGATCTCAATTCTCAACAGCAAGGGGAGTTTTTCTGTTCCCCCTATCTTTTAGCTAGCAATTAATATGCTTTGAGGACAAAGTCATCTTTTAAGTGAGGGGTGTTGGGTATTCCTTTAATTTTTTCTATAAATGCCTTACACATCACTTGCATGTCCATAAAAATAGAAAAACCCAAAAATGCATATCCCAAAAATTTTTTTTAGCCAATGTCTAAATTAGCATGAATAATACAACTTCAATATCACAAAAAGCATGCTCCAAAATTTTTTTCTTTCTATATGCATATCTTTTACCTTACCCTTGGATGAATGCATGATTGAGAAAAATGAATGTTTGCTTGATTGATTGATTGCATGTACAAAATAAAAATGCTTGGATGTTATTCCTTAGTAAAGTCTTATATAATGATTGCCTATGACGCACCCTTCTAAGTAATCTTTGTCTTGACTTTTAAATCGAATAAAGAACAATGTAGAAATTAAGCCTGATTTATAAACTTTTCACCAATGACCATGAATTAGAAAAAACCCCTTTTCTAGCCATAACGAACCTAGAATCCTTCAGAAAAGAGTAGGATGCTTAAATTCGCTTGCCATCACCTCGATAGAACGGTCAAACATCGAAACTATTAGAATAAAGCCAAGCTTAGAGTTAGCCAAACCGGGGCTAAGCAAATGCTAGCTACCAAAAATAGAATCCCAAATCAAAAGTAGCAAAAGCATACTTTTAGCAAATGGCATAGTCCATATCCTCTCACAAAAATATAAAAATATATATAGACCTATATATATTTATATATTTACAAAAAAAAAATGATGAGAGAGAAAATCCTAGTACGGCTAAGTCGAACGATAGGATTCTTTCCGTGATCAGTTAGGATTACTCGATGTTAGTGTGGTACGAATCCCTACGGAAAAAACCTATCCTTTGCCTTAGTAAAACAAGTTACAAACTCATTCCTGGAATTTTCTATATTAGCTTCAATGCGTTAACCGAGGGCCAAGTATAAGGAGGGATCCTTCCCGCTTCAGTGTAGAGAGAAAGCAAGCCTAAGGCGTTTTTTAACTCTTTCAAAGCATGTCTAGTGCGTCGGAGTAGCGAAATTAGGTCGTTTTCTCTAAACATGACCACCGTTGATCGAAACTTTTTAAAAATCAGAGTCCTTGATCAATCGCTTGTCTCTTTAAAACATTTAAAACAAAATTCAAAGATTACTAGTATGATTGTCGAGGCATGAATATTCTACTTTGCATATTTGTTTGAAAACATCAATAAATGTTTGCATGAATGCTTGAGAAATTTAATTTTTGCAAAATTGCTTGAATACCTTGCATGGTGAATGAATGGATGTTAGCATATAAACACACTTTAATCTTTACCTTAATCGGGACGATCAAGATTTAAGTGAGGGGTTTTGATAAGACTATTTTCTTAGGAAAATATCTATCTTAATTAATAATAATAAATTGAGAATACTTATTAATATTGCATTTTTGTATAGGAAATGACACAAAGCATCTCTAACAACCCTTGTGCACAAAAATAAGCTAAAACAAGCTTATTGCGGCCAAAAGAGAAGAAATACGAATCCAAGGCAAAACAGTAATTCTCCCGAAAGTATTCAAAAACCTTCTTCGCGGCAGGACCATTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAAGTGCTTCACAACTAGAGCTCCGCGAGATACTTCGTTTGCAGAAGTACACTTCCCTTGCCGCATAACACAAATATTCGTTCGCCAGCTCACCAAATCAAGCCCTTACTCAAACGCATGCAACCAACCTTCATCAACTCGCATCCAGCTCGCAGAACGTATCAACTCACTCCTTCTGCCCACAAACTTCAGTTCGCCTAAAAACGGTTACCTCAACCTCAAGCCCAAGCCCACGGCCCAAGCCTAA

mRNA sequence

ATGACTACATTGCTCACTTCTTTTGTACAAGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAAGGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATTTCTTTCCAAAATGAAATGAAGCAACAAATTTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCTAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTACCCTTCTAGTAGATGAAAATAAGAAAAATGAAGAAAATTTAGAAAACAACGCCTCTTCTTCTTCTTCAAAAGAAGTACACTTCCCTTGCCGCATAACACAAATATTCGTTCGCCAGCTCACCAAATCAAGCCCTTACTCAAACGCATGCAACCAACCTTCATCAACTCGCATCCAGCTCGCAGAACGTATCAACTCACTCCTTCTGCCCACAAACTTCAGTTCGCCTAAAAACGGTTACCTCAACCTCAAGCCCAAGCCCACGGCCCAAGCCTAA

Coding sequence (CDS)

ATGACTACATTGCTCACTTCTTTTGTACAAGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAAGGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATTTCTTTCCAAAATGAAATGAAGCAACAAATTTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCTAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTACCCTTCTAGTAGATGAAAATAAGAAAAATGAAGAAAATTTAGAAAACAACGCCTCTTCTTCTTCTTCAAAAGAAGTACACTTCCCTTGCCGCATAACACAAATATTCGTTCGCCAGCTCACCAAATCAAGCCCTTACTCAAACGCATGCAACCAACCTTCATCAACTCGCATCCAGCTCGCAGAACGTATCAACTCACTCCTTCTGCCCACAAACTTCAGTTCGCCTAAAAACGGTTACCTCAACCTCAAGCCCAAGCCCACGGCCCAAGCCTAA

Protein sequence

MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPPSEEKVPSNPTLLVDENKKNEENLENNASSSSSKEVHFPCRITQIFVRQLTKSSPYSNACNQPSSTRIQLAERINSLLLPTNFSSPKNGYLNLKPKPTAQA
Homology
[Close]
BLAST of PI0004785 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 9.4e-64
Identity = 125/186 (67.20%), Postives = 154/186 (82.80%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA S+S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQ ++ANVSA+SLRSGKIL+TP + E+K  S P  L  +N+  EE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KEVHFP 186
           K   FP
Sbjct: 322 KNDKFP 327

[Close]
BLAST of PI0004785 vs. ExPASy TrEMBL
Match: A0A5D3DCG3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold860G00100 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 125/186 (67.20%), Postives = 151/186 (81.18%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKLLAQPDHANVS ISLRS KIL+TP + E+KV S P  L  +N+  EE  E N S S+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 KEVHFP 186
           K    P
Sbjct: 181 KNDKSP 186

[Close]
BLAST of PI0004785 vs. ExPASy TrEMBL
Match: A0A1S4E3R2 (uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 125/186 (67.20%), Postives = 151/186 (81.18%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKLLAQPDHANVS ISLRS KIL+TP + E+KV S P  L  +N+  EE  E N S S+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 KEVHFP 186
           K    P
Sbjct: 181 KNDKSP 186

[Close]
BLAST of PI0004785 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 124/186 (66.67%), Postives = 152/186 (81.72%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ +MKQQ++QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQPDH NVSAISLRSGKIL+TP + E+KV S    L  +N+  EE +E N+SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

Query: 181 KEVHFP 186
           K    P
Sbjct: 236 KNDKSP 241

[Close]
BLAST of PI0004785 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.8e-62
Identity = 125/186 (67.20%), Postives = 153/186 (82.26%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQPD+ANVSAISLRSGKIL+TP + E+KV S    L  +N+  EE +E N S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KEVHFP 186
           K    P
Sbjct: 237 KNDKSP 242

[Close]
BLAST of PI0004785 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.9e-63
Identity = 125/186 (67.20%), Postives = 154/186 (82.80%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA S+S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQ ++ANVSA+SLRSGKIL+TP + E+K  S P  L  +N+  EE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KEVHFP 186
           K   FP
Sbjct: 322 KNDKFP 327

[Close]
BLAST of PI0004785 vs. NCBI nr
Match: XP_016902871.1 (PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-63
Identity = 125/186 (67.20%), Postives = 151/186 (81.18%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKLLAQPDHANVS ISLRS KIL+TP + E+KV S P  L  +N+  EE  E N S S+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 KEVHFP 186
           K    P
Sbjct: 181 KNDKSP 186

[Close]
BLAST of PI0004785 vs. NCBI nr
Match: KAA0051761.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-63
Identity = 125/186 (67.20%), Postives = 151/186 (81.18%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNP
Sbjct: 1   MTILLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNP 60

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT  ISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTVISKMDGK 120

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKLLAQPDHANVS ISLRS KIL+TP + E+KV S P  L  +N+  EE  E N S S+S
Sbjct: 121 GKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNSKNESKEEKGETNPSPSNS 180

Query: 181 KEVHFP 186
           K    P
Sbjct: 181 KNDKSP 186

[Close]
BLAST of PI0004785 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-62
Identity = 124/186 (66.67%), Postives = 152/186 (81.72%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ +MKQQ++QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQPDH NVSAISLRSGKIL+TP + E+KV S    L  +N+  EE +E N+SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

Query: 181 KEVHFP 186
           K    P
Sbjct: 236 KNDKSP 241

[Close]
BLAST of PI0004785 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 249.2 bits (635), Expect = 3.7e-62
Identity = 125/186 (67.20%), Postives = 153/186 (82.26%), Query Frame = 0 

Query: 1   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQGPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGK 120
           NLRWGND Q   QA  +S+NQG+NLED++KALATNT+SFQ EMKQQ++QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLLAQPDHANVSAISLRSGKILETPPS-EEKVPSNPTLLVDENKKNEENLENNASSSSS 180
           GKL AQPD+ANVSAISLRSGKIL+TP + E+KV S    L  +N+  EE +E N S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KEVHFP 186
           K    P
Sbjct: 237 KNDKSP 242

The following BLAST results are available for this feature:
BLAST of PI0004785 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004785 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CRR89.4e-6467.20Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3DCG32.7e-6367.20Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S4E3R22.7e-6367.20uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=... [more]
A0A1S3CQU81.4e-6266.67uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=... [more]
E5GBZ41.8e-6267.20Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
BLAST of PI0004785 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047407.11.9e-6367.20retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos... [more]
XP_016902871.15.7e-6367.20PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo][more]
KAA0051761.15.7e-6367.20retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotranspos... [more]
XP_008465649.12.8e-6266.67PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo][more]
ADN33993.13.7e-6267.20retrotransposon gag protein [Cucumis melo subsp. melo][more]
BLAST of PI0004785 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004785.1PI0004785.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding