PI0004726 (gene) Melon (PI 482460) v1

Overview


Name	PI0004726
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr11: 2553217 .. 2553477 (+)
RNA-Seq Expression	PI0004726
Synteny	PI0004726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTATAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGAACATGGACACGGACGCGGTTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGGGCAACCAAGAGTTCAGAGTCGATGA

mRNA sequence

ATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTATAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGAACATGGACACGGACGCGGTTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGGGCAACCAAGAGTTCAGAGTCGATGA

Coding sequence (CDS)

ATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTATAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGAACATGGACACGGACGCGGTTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGGGCAACCAAGAGTTCAGAGTCGATGA

Protein sequence

MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPTDVPNPQEYQQEPENQEELGQPRVQSR

Homology

[Close]

BLAST of PI0004726 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDSEV  GY D+G+GP SSYMD GPS SYM  HGHGRG GEHNEYLY+EAP 
Sbjct: 52  MPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHEAPA 111

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQSR
Sbjct: 112 DVSDRQEYQQEPENQEDREQHRVQSR 135

[Close]

BLAST of PI0004726 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDS++G GY D+GVGPSSSYMD  PSTSYM  HGHGRG G+HNEYLY+EAP 
Sbjct: 58  MPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHEAPA 117

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQ R
Sbjct: 118 DVSDRQEYQQEPENQEDREQHRVQDR 141

[Close]

BLAST of PI0004726 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1  MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
          MP FGAGYCDS++G GY D+GVGPSSSYMD  PSTSYM  HGHGRG G+HNEYLY+EAP 
Sbjct: 4  MPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHEAPA 63

Query: 61 DVPNPQEYQQEPENQEELGQPRVQSR 87
          DV + QEYQQEPENQE+  Q RVQ R
Sbjct: 64 DVSDRQEYQQEPENQEDREQHRVQDR 87

[Close]

BLAST of PI0004726 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDSEV IGY D+ VGP SSYMD GPSTSYM  +GHGRG GEHNEYLY+EAPT
Sbjct: 401 MPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHEAPT 460

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEP+NQE+  Q RVQSR
Sbjct: 461 DVSDRQEYQQEPKNQEDREQHRVQSR 484

[Close]

BLAST of PI0004726 vs. ExPASy TrEMBL
Match: A0A5A7UIF6 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001780 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDS+V  GY D+GVGPSS YMD GPS SYM  HGHGRG GEHN+YLY+EAP 
Sbjct: 191 MPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYM--HGHGRGYGEHNQYLYHEAPA 250

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQSR
Sbjct: 251 DVSDRQEYQQEPENQEDREQHRVQSR 274

[Close]

BLAST of PI0004726 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDSEV  GY D+G+GP SSYMD GPS SYM  HGHGRG GEHNEYLY+EAP 
Sbjct: 52  MPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHEAPA 111

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQSR
Sbjct: 112 DVSDRQEYQQEPENQEDREQHRVQSR 135

[Close]

BLAST of PI0004726 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDS++G GY D+GVGPSSSYMD  PSTSYM  HGHGRG G+HNEYLY+EAP 
Sbjct: 58  MPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHEAPA 117

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQ R
Sbjct: 118 DVSDRQEYQQEPENQEDREQHRVQDR 141

[Close]

BLAST of PI0004726 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1  MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
          MP FGAGYCDS++G GY D+GVGPSSSYMD  PSTSYM  HGHGRG G+HNEYLY+EAP 
Sbjct: 4  MPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHEAPA 63

Query: 61 DVPNPQEYQQEPENQEELGQPRVQSR 87
          DV + QEYQQEPENQE+  Q RVQ R
Sbjct: 64 DVSDRQEYQQEPENQEDREQHRVQDR 87

[Close]

BLAST of PI0004726 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 5.6e-26
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDSEV IGY D+ VGP SSYMD GPSTSYM  +GHGRG GEHNEYLY+EAPT
Sbjct: 401 MPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHEAPT 460

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEP+NQE+  Q RVQSR
Sbjct: 461 DVSDRQEYQQEPKNQEDREQHRVQSR 484

[Close]

BLAST of PI0004726 vs. NCBI nr
Match: KAA0054357.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK12395.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MPAFGAGYCDSEVGIGYNDSGVGPSSSYMDAGPSTSYMHEHGHGRGCGEHNEYLYYEAPT 60
           MP FGAGYCDS+V  GY D+GVGPSS YMD GPS SYM  HGHGRG GEHN+YLY+EAP 
Sbjct: 191 MPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYM--HGHGRGYGEHNQYLYHEAPA 250

Query: 61  DVPNPQEYQQEPENQEELGQPRVQSR 87
           DV + QEYQQEPENQE+  Q RVQSR
Sbjct: 251 DVSDRQEYQQEPENQEDREQHRVQSR 274

The following BLAST results are available for this feature:

BLAST of PI0004726 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXX3	1.2e-26	75.58	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3BMS3	2.1e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U3Y0	2.1e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3DJV7	2.7e-26	76.74	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7UIF6	6.0e-26	74.42	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0004726 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049532.1	2.5e-26	75.58	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	4.3e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0048355.1	4.3e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK23842.1	5.6e-26	76.74	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0054357.1	1.2e-25	74.42	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of PI0004726 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004726.1	PI0004726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance