PI0004717 (gene) Melon (PI 482460) v1

Overview
NamePI0004717
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 19997079 .. 19997492 (+)
RNA-Seq ExpressionPI0004717
SyntenyPI0004717
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGAATGAGTATGATGATTCTTACAAGTTCATCAATGATGCGATTGGAAAACCAATGATGGATGGACTTGAAGATAACTTCCAAACCCAAACAGATCTACAAGAACGCGCAATGAGACATGAGAAACAGATTCTGGACTTGGAGTTAAAAGTTGATAATCGTCATCAAGCACAACATGATCAACTCACCTCTGAGATTGCGAGTTTAAAGACGCAAAACAAGGCGATGGTAAGTTTAATTAAGAAAGCATTGCAGCAGTCTAACATGCAATACAAATTAATGACGAATTACATTCACGTGGCGATTACAAGTCTCATGCTCAAGCCTGCCATTCTGCCAGAATTTGAGGAACCCCTATCTGATGATGAATTGGAGGCCGCGCTAGGACCTTCTGAAACGCGGCTATAA

mRNA sequence

ATGGACGAGAATGAGTATGATGATTCTTACAAGTTCATCAATGATGCGATTGGAAAACCAATGATGGATGGACTTGAAGATAACTTCCAAACCCAAACAGATCTACAAGAACGCGCAATGAGACATGAGAAACAGATTCTGGACTTGGAGTTAAAAGTTGATAATCGTCATCAAGCACAACATGATCAACTCACCTCTGAGATTGCGAGTTTAAAGACGCAAAACAAGGCGATGGTAAGTTTAATTAAGAAAGCATTGCAGCAGTCTAACATGCAATACAAATTAATGACGAATTACATTCACGTGGCGATTACAAGTCTCATGCTCAAGCCTGCCATTCTGCCAGAATTTGAGGAACCCCTATCTGATGATGAATTGGAGGCCGCGCTAGGACCTTCTGAAACGCGGCTATAA

Coding sequence (CDS)

ATGGACGAGAATGAGTATGATGATTCTTACAAGTTCATCAATGATGCGATTGGAAAACCAATGATGGATGGACTTGAAGATAACTTCCAAACCCAAACAGATCTACAAGAACGCGCAATGAGACATGAGAAACAGATTCTGGACTTGGAGTTAAAAGTTGATAATCGTCATCAAGCACAACATGATCAACTCACCTCTGAGATTGCGAGTTTAAAGACGCAAAACAAGGCGATGGTAAGTTTAATTAAGAAAGCATTGCAGCAGTCTAACATGCAATACAAATTAATGACGAATTACATTCACGTGGCGATTACAAGTCTCATGCTCAAGCCTGCCATTCTGCCAGAATTTGAGGAACCCCTATCTGATGATGAATTGGAGGCCGCGCTAGGACCTTCTGAAACGCGGCTATAA

Protein sequence

MDENEYDDSYKFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDNRHQAQHDQLTSEIASLKTQNKAMVSLIKKALQQSNMQYKLMTNYIHVAITSLMLKPAILPEFEEPLSDDELEAALGPSETRL
Homology
BLAST of PI0004717 vs. ExPASy TrEMBL
Match: A0A5D3DS12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00130 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 5  EYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN---RHQAQ 64
          +YDD Y KFI +  GKPM DG ED FQ Q +LQE  MR +KQ+ +LEL++DN   RHQAQ
Sbjct: 9  KYDDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQ 68

Query: 65 HDQLTSEIASLKTQNKAMVSLIKKALQQSN 91
           D +  +I SLKTQN+A+ +LIK+A  Q+N
Sbjct: 69 LDIIEVDI-SLKTQNRALNTLIKRASSQTN 96

BLAST of PI0004717 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.9e-08
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0

Query: 3  ENEYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDNRHQ 59
          E++ +D Y KFI D  GKP+MDG +D FQ Q DLQE   RHEKQI DLELK+DN +Q
Sbjct: 33 ESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQDLELKIDNCNQ 89

BLAST of PI0004717 vs. ExPASy TrEMBL
Match: A0A5A7TWF8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001090 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06
Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 5  EYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN---RHQAQ 64
          +YDD Y KFI +  GKPM DG ED FQ Q +LQE  MR +KQ+ +LEL++DN   RHQAQ
Sbjct: 9  KYDDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQ 68

Query: 65 HDQLTSEIASLKTQNKAM 79
           D +  +I  LK    ++
Sbjct: 69 LDIIEVDIVVLKNAESSV 85

BLAST of PI0004717 vs. ExPASy TrEMBL
Match: A0A5D3D645 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold368G00010 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0

Query: 1  MDENEYDDSY---KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN-- 60
          M E E  D+Y   KFI+  I KP+  G ED FQ Q++LQE  +R +KQ+ DLELK+DN  
Sbjct: 1  MKEEEEVDAYYVFKFIDKFICKPLERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNAS 60

Query: 61 -RHQAQHDQLTSEIASLKTQNKAMVSLIK 84
            +QAQ DQ   E+  LK Q K+  ++++
Sbjct: 61 ASNQAQMDQFQVEVKKLKMQIKSSKNIMQ 89

BLAST of PI0004717 vs. ExPASy TrEMBL
Match: A0A0A0KJB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.2e-05
Identity = 35/121 (28.93%), Postives = 69/121 (57.02%), Query Frame = 0

Query: 4   NEYDDSYKFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDNR---HQAQ 63
           ++ D + KF +D + KPM  G ED  Q Q++ QE   + +KQ+ D +LK+DN+   HQ Q
Sbjct: 44  DDEDYTLKFFDDYVCKPMSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQVQ 103

Query: 64  HDQLTSEI-------ASLKTQNKAMVSLIKKALQQSNMQYKLMTNYIHVAITSLMLKPAI 115
            + L +++         LK QN+ ++ ++K+  + +++Q+     Y++ ++ S++  P  
Sbjct: 104 IEGLKAKMQELILQEQELKVQNQVIMEMVKQTTRWNDVQFTSALRYLYSSMCSIIPTPHT 163

BLAST of PI0004717 vs. NCBI nr
Match: TYK26456.1 (hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-11
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 5  EYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN---RHQAQ 64
          +YDD Y KFI +  GKPM DG ED FQ Q +LQE  MR +KQ+ +LEL++DN   RHQAQ
Sbjct: 9  KYDDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQ 68

Query: 65 HDQLTSEIASLKTQNKAMVSLIKKALQQSN 91
           D +  +I SLKTQN+A+ +LIK+A  Q+N
Sbjct: 69 LDIIEVDI-SLKTQNRALNTLIKRASSQTN 96

BLAST of PI0004717 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-07
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0

Query: 3  ENEYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDNRHQ 59
          E++ +D Y KFI D  GKP+MDG +D FQ Q DLQE   RHEKQI DLELK+DN +Q
Sbjct: 33 ESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQDLELKIDNCNQ 89

BLAST of PI0004717 vs. NCBI nr
Match: KAA0047490.1 (hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-06
Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 5  EYDDSY-KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN---RHQAQ 64
          +YDD Y KFI +  GKPM DG ED FQ Q +LQE  MR +KQ+ +LEL++DN   RHQAQ
Sbjct: 9  KYDDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQ 68

Query: 65 HDQLTSEIASLKTQNKAM 79
           D +  +I  LK    ++
Sbjct: 69 LDIIEVDIVVLKNAESSV 85

BLAST of PI0004717 vs. NCBI nr
Match: KAA0049656.1 (hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK19034.1 hypothetical protein E5676_scaffold368G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-06
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0

Query: 1  MDENEYDDSY---KFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDN-- 60
          M E E  D+Y   KFI+  I KP+  G ED FQ Q++LQE  +R +KQ+ DLELK+DN  
Sbjct: 1  MKEEEEVDAYYVFKFIDKFICKPLERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNAS 60

Query: 61 -RHQAQHDQLTSEIASLKTQNKAMVSLIK 84
            +QAQ DQ   E+  LK Q K+  ++++
Sbjct: 61 ASNQAQMDQFQVEVKKLKMQIKSSKNIMQ 89

BLAST of PI0004717 vs. NCBI nr
Match: KGN49653.1 (hypothetical protein Csa_018510 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 8.7e-05
Identity = 35/121 (28.93%), Postives = 69/121 (57.02%), Query Frame = 0

Query: 4   NEYDDSYKFINDAIGKPMMDGLEDNFQTQTDLQERAMRHEKQILDLELKVDNR---HQAQ 63
           ++ D + KF +D + KPM  G ED  Q Q++ QE   + +KQ+ D +LK+DN+   HQ Q
Sbjct: 44  DDEDYTLKFFDDYVCKPMSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQVQ 103

Query: 64  HDQLTSEI-------ASLKTQNKAMVSLIKKALQQSNMQYKLMTNYIHVAITSLMLKPAI 115
            + L +++         LK QN+ ++ ++K+  + +++Q+     Y++ ++ S++  P  
Sbjct: 104 IEGLKAKMQELILQEQELKVQNQVIMEMVKQTTRWNDVQFTSALRYLYSSMCSIIPTPHT 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DS121.4e-1155.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0L96.9e-0861.40Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TWF81.0e-0650.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D6451.7e-0644.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KJB94.2e-0528.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
TYK26456.12.8e-1155.56hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa][more]
KAA0047757.11.4e-0761.40hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023... [more]
KAA0047490.12.1e-0650.00hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa][more]
KAA0049656.13.5e-0644.94hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK190... [more]
KGN49653.18.7e-0528.93hypothetical protein Csa_018510 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004717.1PI0004717.1mRNA