PI0004690 (gene) Melon (PI 482460) v1

Overview
NamePI0004690
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 24463213 .. 24463657 (+)
RNA-Seq ExpressionPI0004690
SyntenyPI0004690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGGGAGTAATGATGATGATAGTAGAAGGAATTAAAATTAAAAAAATTAGAAAAGAAAAAGTGGGTCCAAATGAAGATTGCGAGAAAGGCATTGGCATTTGCATTTGCCAAACGCCACAGGACACGACACGCAGCGTTTTGGGTGATGAGATGTGAATGTCCAAATTAACAAAAGCTTTGAGTTCTTTGTGGCCTTTTCACAAACAACAGATGGGGGTGAGCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCCTCGGCGCCACGCCTCGATCATGCACAATACCAATATTCCACTTTTTTTCCATTTATAAATCAAAATTCCATCTCACCCACATGCCTCTATACCCTATTATATATATGTACGGACAAAATCACATCAGAATTATAAATATATGTGTTAGGATTAAAAAATTATTCCATTGA

mRNA sequence

ATGGAGAAGGTGGGAGTAATGATGATGATAGTAGAAGGAATTAAAATTAAAAAAATTAGAAAAGAAAAAGTGGGTCCAAATGAAGATTGCGAGAAAGGCATTGGCATTTGCATTTGCCAAACGCCACAGGACACGACACGCAGCGTTTTGGCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCCTCGGCGCCACGCCTCGATCATGCACAATACCAATATTCCACTTTTTTTCCATTTATAAATCAAAATTCCATCTCACCCACATGCCTCTATACCCTATTATATATATGTACGGACAAAATCACATCAGAATTATAAATATATGTGTTAGGATTAAAAAATTATTCCATTGA

Coding sequence (CDS)

ATGGAGAAGGTGGGAGTAATGATGATGATAGTAGAAGGAATTAAAATTAAAAAAATTAGAAAAGAAAAAGTGGGTCCAAATGAAGATTGCGAGAAAGGCATTGGCATTTGCATTTGCCAAACGCCACAGGACACGACACGCAGCGTTTTGGCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCCTCGGCGCCACGCCTCGATCATGCACAATACCAATATTCCACTTTTTTTCCATTTATAAATCAAAATTCCATCTCACCCACATGCCTCTATACCCTATTATATATATGTACGGACAAAATCACATCAGAATTATAAATATATGTGTTAGGATTAAAAAATTATTCCATTGA

Protein sequence

MEKVGVMMMIVEGIKIKKIRKEKVGPNEDCEKGIGICICQTPQDTTRSVLAIHLHHYYSFDAIIALGATPRSCTIPIFHFFSIYKSKFHLTHMPLYPIIYMYGQNHIRIINICVRIKKLFH
Homology
[Close]
BLAST of PI0004690 vs. ExPASy TrEMBL
Match: A0A0A0L1D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663620 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.5e-19
Identity = 57/87 (65.52%), Postives = 65/87 (74.71%), Query Frame = 0 

Query: 1  MEKVGVMMMIVEGIKIKKIRK--EKVGPNEDCEKGIGICICQTPQDTTRSVL----AIHL 60
          MEKVG  MMIVEGI+IK+ +K  +     +    GIGICIC+TPQDT  +      +IHL
Sbjct: 1  MEKVGA-MMIVEGIRIKERKKWVQMEIARKGIGIGIGICICETPQDTQHAAFWMMRSIHL 60

Query: 61 HHYYSFDAIIALGATPRSCTIPIFHFF 82
          HHYYSFDAIIALGATPRSCTIPIFHFF
Sbjct: 61 HHYYSFDAIIALGATPRSCTIPIFHFF 86

[Close]
BLAST of PI0004690 vs. NCBI nr
Match: KGN55503.1 (hypothetical protein Csa_012164 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-19
Identity = 57/87 (65.52%), Postives = 65/87 (74.71%), Query Frame = 0 

Query: 1  MEKVGVMMMIVEGIKIKKIRK--EKVGPNEDCEKGIGICICQTPQDTTRSVL----AIHL 60
          MEKVG  MMIVEGI+IK+ +K  +     +    GIGICIC+TPQDT  +      +IHL
Sbjct: 1  MEKVGA-MMIVEGIRIKERKKWVQMEIARKGIGIGIGICICETPQDTQHAAFWMMRSIHL 60

Query: 61 HHYYSFDAIIALGATPRSCTIPIFHFF 82
          HHYYSFDAIIALGATPRSCTIPIFHFF
Sbjct: 61 HHYYSFDAIIALGATPRSCTIPIFHFF 86

The following BLAST results are available for this feature:
BLAST of PI0004690 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1D04.5e-1965.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663620 PE=4 SV=1[more]
BLAST of PI0004690 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55503.19.3e-1965.52hypothetical protein Csa_012164 [Cucumis sativus][more]
BLAST of PI0004690 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004690.1PI0004690.1mRNA