PI0004673 (gene) Melon (PI 482460) v1

Overview
NamePI0004673
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 3714705 .. 3717975 (+)
RNA-Seq ExpressionPI0004673
SyntenyPI0004673
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATAATGGTATTAATATTTGAGATATTAATATTAGTTGTTATTATTTTGAGCCTTTCCTTTTAAAATTTTCCTTTTTCCTTCCTTTCCCTCTCTTTCTCGTGTTTTCATTTCTCTTTGTTCTCTTCGCGTTCAGGTTGCCAAAAACCACCCTCCCCTTCTCTCAAGCCCTAGCGCCGCCCATCTCCTTACCGCCTGGAATCTTTCCGCCCATCCGTACCGCCGGAGTGCTTGCCGCCTGTATGTGTTGCCTGGGCTTTGCTCGCATAGCCTAGTCACGCGGCGTATAGCCCTTCTTTCCGCCAAGCTTTACCTTCGTAGAGTGCCCCCTTCGCAGAGGTGTTCACCGAAGGTTTTCCGCTCCATCTCACCTAGTTTTCTTCTCCACGCGTGCTGGTTAAGGGTTTTGCAGTTTTGCAAAGTAGTCTTCCCTGTTGGTCGCCCCTCTGTCCGCGAAGACCCCTTGGCGTTCAGCTAGCCCTCTCTGTCCGCGAGCTGGGGTGCTCAGTCCGCCTTCCTCTGTTGTCTCTTGTCGCGGACTCCCCTTGAGCCGAGTTAAGGTAAGTCCTCACTGGATTTTAAGTTTTGGATTGGTTTATATCTGAATCTTAGTGTCTTTGTGGTTTGTTCTCGTTGTGGTTTTGAAGGTGCCGTTTGGTCCGTTGGTTGTGGAAATTGGGCGTTTGGAGCTTTAATTCTCATCCTTTCATTTTTGGGTAAGTGTTGCGGTTTGGTATTGTGTGCCTTGTTTGGGTGGAAATTTGGAACTCATTGCTTGTTGGCCATTCTTGTTGTTTAGGTTTCTCTTCATCGCGTTGGTGTACCCTTGGTTGACACATTTGAGGTAAGGGATACCTCTATCGGATTAGCGACTCTAAGGCGTTTTGGGTGATAATTCTATGATTGGTTGTCTCATGAATTTATGAGCATTGTGATCGTTGTTGGTTGCTTAAGCATGCTGGAGAGTTTTTCCCTAAAGACTTGTGTTATGTTATTAGCTTTGAATATTGCCTTAGAAATATCAAAGCATGACTGTATGAGACTTTATGATTGAGATTGATATTCTGGATTGCGTAGGCTGTCATGTAATATGTAGACTGAGGGTGGACTGTTATCTTTAGCTATGGTAGTGTACTTGCAGGCATGGAGTCCTACGGGATGTTTTATTTGTGTTCCTACGGGATCACTAGACTGATTAGGTGTATCCTTCGGGATCGCCAGACTGATTAGGTGTATCCTTCGGGATCACCAGACTGATTAGGTGAGTCCTTCGGGATCGCCAGACTGTATTGTGGATTTCCTTCGGGATTCCTAGACTGTTATTGCTGCAGGGTACCCCATAGGAAGATAACAGTTCGATCCCTAGCTTGACCTGTAGCGTTTTCCCTTACTGAGTATATTTGTATACTCACCCCTTCTATGTTTAACTTCTGCAGGCAAAAGTAATTCGAGGGGCAGACCGGCGAGGGGCAGGAAGGATATGTGATGGTCATAGGCGTCGTCGTCGCTTCCGCCATTGGTTATGTCATTTTGTGTCCTATTTTGGGATTTATACGTTATGTCTTTTAAAACTTTATTACTGTTTCGCTGTTTCAAACGATGGTTTGGTCGTTATATATTTTGTATTTAAAATCGGGCCCACACTTATTGTTTTCCGCACTTGAACTTCCTGAATAATATTATTAATATTTTTTTGGAGAAAATCTTGTTTTAATTAAATTTGTGTATTCACTGGAGTTGTGGTAACGGTCTCGTGTCTTAGAAAGTCGGGTTGTTACAGAAAGTGTTAGGAGTCAAGTGACTGAAGGACTCTAAATGAGAACATTTTTTAATATAAGGATGTAAGTAAATTTACAACATTTTCTATCTTGTCTATCATTCGTTATCAATATTATTGCTACTTTTTCACTAATCATCTAACATCTTTTTACTTGTAATTTTGTATAATGCCACTAAATTCAACACAAGAAAAATCTCAGACAATTTTGAAATATTTCAAAGAAATTGAGGCGCAGGAGAAAAAAGAATAGACAAAGATAAAAAAAAAACAAATGGAAGCAGGACAAATTCTGTTAAAACAAGGCCTGAAAGAAATAAAAATAATGTTAACAGGACAAGAAAAAATCAAAAGAATGTTGAGCTTGGTTATGAGAAGCTTGAACGTTAGGCTACCATTAGAAAATCTTTTGCAACAACAAAAGAAAAAGAGTATCAGCGAGTTGTGAAAAAAAATAAACCACCTACTTGTAGCCTTAGCCTTCTCGAAGAAGATGAAGAAGTTAATACAATAGTCGGTCAAGTATGCAATAACATATTGCTCTACAGTTAGTATTTAATTCATTATCTACTATTTTATTTTGTTTAAATTTGCTTCAATTCAAAATAAAGAACAATTGTGTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTATAAAGAACTGTGGTCTTTGAAACACAAAGTAATTTGCAAACAATTGGAAATACAAATTTAGAAACATTAGAAACACTAAAAACACAAGTGTTGCTAGAGGTTGATTCTTTTGCAAACAATAAATCTATCACACCATATCTGGGATAGAAAAGATAGTGCTCTATCTTTATCTATCTGTGATAGTCAAAGATAGTCCTCTATATCTGTATATCTAAGATGCAGAATGCTAGACATCTATATGATGTTTTTAAAATTCTTATATTATATGCTTGCAGATAGATGAAGACGAACAAGATGATTTCGAAATTACAGATTTAGAGAAACCAAAAACACAAATGTTGACCCAGGTTTGACTCTTTTCTACACAATTGCTTACAGGATCGTTTAGATATTGTTGCATGATCGTATACATTATGCTACAGGATCGTTTAGATGTTGTTGCACGATCATTTATTGCAGATAGATAGTGATAGTTCTCTATTTCTATCTATATGAGAAAGATAGATAATTATCATTGTCTACCATTCATTGTTCCTCTTATTAACTCTAATATTTTATTACAGCAAATCATTGAAGAAAAGAAAATAGAAAAAAAGGATGAGGAAATGAAAGGGGAGCAAAATCAAGAAGATACAGATAGTGATAGTGAAGAAATTCTATTTATTATAAAGAGAAGACAAAAGAGAAAACAAGTTGTTGATGATGATGATGAAACAGAAAAAGAGATTGACAGTGATAGTGAAGGGGATGTAGAAGAAGAAATAGAAACAAAAAGAAACCTAAAGGGAAAGCAAAAGGAAAAAAAAGCGAAAAAAGCTTAA

mRNA sequence

ATGATAATAATGGTTGCCAAAAACCACCCTCCCCTTCTCTCAAGCCCTAGCGCCGCCCATCTCCTTACCGCCTGGAATCTTTCCGCCCATCCGTACCGCCGGAGTGCTTGCCGCCTGTATGTGTTGCCTGGGCTTTGCTCGCATAGCCTAGTCACGCGGCGTATAGCCCTTCTTTCCGCCAAGCTTTACCTTCGTAGAGTGCCCCCTTCGCAGAGGTGTTCACCGAAGTCTTCCCTGTTGGTCGCCCCTCTGTCCGCGAAGACCCCTTGGCGTTCAGCTAGCCCTCTCTGTCCGCGAGCTGGGGTGCTCAGTCCGCCTTCCTCTGTTGTCTCTTGTCGCGGACTCCCCTTGAGCCGAGTTAAGGTTTCTCTTCATCGCGTTGGTGTACCCTTGGTTGACACATTTGAGATAGATGAAGACGAACAAGATGATTTCGAAATTACAGATTTAGAGAAACCAAAAACACAAATGTTGACCCAGCAAATCATTGAAGAAAAGAAAATAGAAAAAAAGGATGAGGAAATGAAAGGGGAGCAAAATCAAGAAGATACAGATAGTGATAGTGAAGAAATTCTATTTATTATAAAGAGAAGACAAAAGAGAAAACAAGTTGTTGATGATGATGATGAAACAGAAAAAGAGATTGACAGTGATAGTGAAGGGGATGTAGAAGAAGAAATAGAAACAAAAAGAAACCTAAAGGGAAAGCAAAAGGAAAAAAAAGCGAAAAAAGCTTAA

Coding sequence (CDS)

ATGATAATAATGGTTGCCAAAAACCACCCTCCCCTTCTCTCAAGCCCTAGCGCCGCCCATCTCCTTACCGCCTGGAATCTTTCCGCCCATCCGTACCGCCGGAGTGCTTGCCGCCTGTATGTGTTGCCTGGGCTTTGCTCGCATAGCCTAGTCACGCGGCGTATAGCCCTTCTTTCCGCCAAGCTTTACCTTCGTAGAGTGCCCCCTTCGCAGAGGTGTTCACCGAAGTCTTCCCTGTTGGTCGCCCCTCTGTCCGCGAAGACCCCTTGGCGTTCAGCTAGCCCTCTCTGTCCGCGAGCTGGGGTGCTCAGTCCGCCTTCCTCTGTTGTCTCTTGTCGCGGACTCCCCTTGAGCCGAGTTAAGGTTTCTCTTCATCGCGTTGGTGTACCCTTGGTTGACACATTTGAGATAGATGAAGACGAACAAGATGATTTCGAAATTACAGATTTAGAGAAACCAAAAACACAAATGTTGACCCAGCAAATCATTGAAGAAAAGAAAATAGAAAAAAAGGATGAGGAAATGAAAGGGGAGCAAAATCAAGAAGATACAGATAGTGATAGTGAAGAAATTCTATTTATTATAAAGAGAAGACAAAAGAGAAAACAAGTTGTTGATGATGATGATGAAACAGAAAAAGAGATTGACAGTGATAGTGAAGGGGATGTAGAAGAAGAAATAGAAACAAAAAGAAACCTAAAGGGAAAGCAAAAGGAAAAAAAAGCGAAAAAAGCTTAA

Protein sequence

MIIMVAKNHPPLLSSPSAAHLLTAWNLSAHPYRRSACRLYVLPGLCSHSLVTRRIALLSAKLYLRRVPPSQRCSPKSSLLVAPLSAKTPWRSASPLCPRAGVLSPPSSVVSCRGLPLSRVKVSLHRVGVPLVDTFEIDEDEQDDFEITDLEKPKTQMLTQQIIEEKKIEKKDEEMKGEQNQEDTDSDSEEILFIIKRRQKRKQVVDDDDETEKEIDSDSEGDVEEEIETKRNLKGKQKEKKAKKA
Homology
[Close]
BLAST of PI0004673 vs. ExPASy TrEMBL
Match: A0A0A0LW59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181490 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.9e-14
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 152 KPKTQMLTQQIIEEKKIEKKDEEMKGEQNQEDTDSDSEEILFIIKRRQKRKQVVDDDDET 211
           K K      QIIEEKK+EK+DEE+K EQNQED D++SEEILF I+RRQK K VVDDDDET
Sbjct: 18  KRKQSQEQNQIIEEKKLEKEDEEVKEEQNQEDIDNESEEILFTIRRRQKGKLVVDDDDET 77

Query: 212 EKEIDSDSEGDVEEEI 228
           E+EI SDSE D EEEI
Sbjct: 78  EEEIASDSEEDAEEEI 93

[Close]
BLAST of PI0004673 vs. NCBI nr
Match: KAE8652864.1 (hypothetical protein Csa_013007, partial [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 152 KPKTQMLTQQIIEEKKIEKKDEEMKGEQNQEDTDSDSEEILFIIKRRQKRKQVVDDDDET 211
           K K      QIIEEKK+EK+DEE+K EQNQED D++SEEILF I+RRQK K VVDDDDET
Sbjct: 18  KRKQSQEQNQIIEEKKLEKEDEEVKEEQNQEDIDNESEEILFTIRRRQKGKLVVDDDDET 77

Query: 212 EKEI 216
           E+EI
Sbjct: 78  EEEI 81

[Close]
BLAST of PI0004673 vs. NCBI nr
Match: KAE8637350.1 (hypothetical protein CSA_011900, partial [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 7.2e-10
Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 161 QIIEEKKIEKKDEEMKGEQNQEDTDSDSEEILFIIKRRQKRKQVVDDDDETEKEI 216
           QIIEEKK+EK+DEE+K EQNQED D++SEEILF I+RRQK K VVDDDDETE+EI
Sbjct: 1   QIIEEKKLEKEDEEVKEEQNQEDIDNESEEILFTIRRRQKGKLVVDDDDETEEEI 55

The following BLAST results are available for this feature:
BLAST of PI0004673 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004673 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW598.9e-1471.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181490 PE=4 SV=1[more]
BLAST of PI0004673 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652864.14.2e-1070.31hypothetical protein Csa_013007, partial [Cucumis sativus][more]
KAE8637350.17.2e-1078.18hypothetical protein CSA_011900, partial [Cucumis sativus][more]
BLAST of PI0004673 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004673.1PI0004673.1mRNA