PI0004533 (gene) Melon (PI 482460) v1

Overview


Name	PI0004533
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr06: 24069424 .. 24069984 (+)
RNA-Seq Expression	PI0004533
Synteny	PI0004533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTTGTAATTGTCGTCTTCATCTCCATCATCATCTTCTCTGTCGTTGCTTCCTTTGCCATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCAAGGAGTTTAGATGAACACGGTTCCGACCTTGAAGCCGGTGAGACAAACGAAAACCAAAGGATGATCACCAGGAGTAGGATTTTGCATCAAACAAGTAGTCATGGGAGAGACATGGAGAGGTCAGAAAGCAATGCATGGAGGGAAAGCATGGAGAGAACAACAATGATAGAAAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGTGGCGAAATGCATTGATTGTGCAATATGTTTGGAGGATTTTGAAAATGGAGAGCTTTGCCAAAAATTTCCAGTGTGTAATCATATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCCATTTGTCGCTGTTCTATTGTCAATGATAAATGCTGA

mRNA sequence

ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTTGTAATTGTCGTCTTCATCTCCATCATCATCTTCTCTGTCGTTGCTTCCTTTGCCATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCAAGGAGTTTAGATGAACACGGTTCCGACCTTGAAGCCGGTGAGACAAACGAAAACCAAAGGATGATCACCAGGAGTAGGATTTTGCATCAAACAAGTAGTCATGGGAGAGACATGGAGAGGTCAGAAAGCAATGCATGGAGGGAAAGCATGGAGAGAACAACAATGATAGAAAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGTGGCGAAATGCATTGATTGTGCAATATGTTTGGAGGATTTTGAAAATGGAGAGCTTTGCCAAAAATTTCCAGTGTGTAATCATATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCCATTTGTCGCTGTTCTATTGTCAATGATAAATGCTGA

Coding sequence (CDS)

ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTTGTAATTGTCGTCTTCATCTCCATCATCATCTTCTCTGTCGTTGCTTCCTTTGCCATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCAAGGAGTTTAGATGAACACGGTTCCGACCTTGAAGCCGGTGAGACAAACGAAAACCAAAGGATGATCACCAGGAGTAGGATTTTGCATCAAACAAGTAGTCATGGGAGAGACATGGAGAGGTCAGAAAGCAATGCATGGAGGGAAAGCATGGAGAGAACAACAATGATAGAAAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGTGGCGAAATGCATTGATTGTGCAATATGTTTGGAGGATTTTGAAAATGGAGAGCTTTGCCAAAAATTTCCAGTGTGTAATCATATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCCATTTGTCGCTGTTCTATTGTCAATGATAAATGCTGA

Protein sequence

MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRILHQTSSHGRDMERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC

Homology

[Close]

BLAST of PI0004533 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 124 YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
           YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Sbjct: 93  YGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLI 151

[Close]

BLAST of PI0004533 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 129 AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
           + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Sbjct: 149 SAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202

[Close]

BLAST of PI0004533 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 7.4e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 118 VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPIC 177
           V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+C
Sbjct: 106 VFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC 165

Query: 178 RCSI 182
           R ++
Sbjct: 166 RSNL 169

[Close]

BLAST of PI0004533 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 122 VSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS 181
           + Y  ++       CAICL D++   L ++ P CNH+FH  CI  WL+ N TCP+CR S
Sbjct: 133 ILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTS 191

[Close]

BLAST of PI0004533 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 85  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICL 144
           RI  + +S  +    S +NA    +   T ++K A    PV  YGS     K  +C ICL
Sbjct: 59  RITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICL 118

Query: 145 EDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
            DFE+GE  +  P CNH FH  CI  WL    +CP CR S++
Sbjct: 119 GDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160

[Close]

BLAST of PI0004533 vs. ExPASy TrEMBL
Match: A0A5A7UZF7 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005240 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.4e-88
Identity = 173/190 (91.05%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPI 180
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPI
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 180

Query: 181 CRCSIVNDKC 187
           CRCSIVNDKC
Sbjct: 181 CRCSIVNDKC 190

[Close]

BLAST of PI0004533 vs. ExPASy TrEMBL
Match: A0A0A0L6M6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 166/188 (88.30%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FI+IIIFSVVASFAII+ IYVIC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLD H S+LEAGE NENQ MITRSRIL   HQTSSHGRD MERSESNAWRE MERT MIE
Sbjct: 61  SLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPI 180
           KVAAPVSYGSSEA  KCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPI
Sbjct: 121 KVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 180

Query: 181 CRCSIVND 185
           CRCSIVND
Sbjct: 181 CRCSIVND 188

[Close]

BLAST of PI0004533 vs. ExPASy TrEMBL
Match: A0A5D3BTV2 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00260 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.9e-65
Identity = 141/158 (89.24%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV 155
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPV 158

[Close]

BLAST of PI0004533 vs. ExPASy TrEMBL
Match: E5GBS2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64
Identity = 140/158 (88.61%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV 155
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPL 158

[Close]

BLAST of PI0004533 vs. ExPASy TrEMBL
Match: A0A251PMJ1 (RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G182700 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.8e-20
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 14  PPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGE 73
           PP +   LT    +I V++ II FS++ S  +I   YV+C+++  P   +    D EAG+
Sbjct: 46  PPPVFSLLTFIGTIIFVYVCIIAFSIILSLLVIALFYVVCEFVWTP-LYERRNRDPEAGD 105

Query: 74  TN----------ENQRMITRSRILHQTSSHGRDME--------RSESNAWRESMERTTMI 133
                        +Q    ++ +LH      R +E          E    R   +R  ++
Sbjct: 106 ERLSFQPNREEWHDQATFYQAAVLHNL----RVLEILDSIVEVLEERRDQRHQRDREQLL 165

Query: 134 E-KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTC 184
           E K+  P++YGS E    C DC IC+EDFE  +LCQ FP CNH FH  C+  WLKK++TC
Sbjct: 166 ENKLPPPIAYGSHEIEMNCKDCVICMEDFETDQLCQVFPSCNHTFHSKCMNTWLKKSLTC 225

[Close]

BLAST of PI0004533 vs. NCBI nr
Match: KAA0060638.1 (putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 173/190 (91.05%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPI 180
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPI
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 180

Query: 181 CRCSIVNDKC 187
           CRCSIVNDKC
Sbjct: 181 CRCSIVNDKC 190

[Close]

BLAST of PI0004533 vs. NCBI nr
Match: TYK02232.1 (putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 1.0e-64
Identity = 141/158 (89.24%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV 155
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPV 158

[Close]

BLAST of PI0004533 vs. NCBI nr
Match: ADN33914.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 140/158 (88.61%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD MERSESN WRE MERT MIE
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV 155
           KVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Sbjct: 121 KVAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPL 158

[Close]

BLAST of PI0004533 vs. NCBI nr
Match: XP_011652743.1 (uncharacterized protein LOC105435076 [Cucumis sativus] >KGN56259.2 hypothetical protein Csa_011552 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 151/268 (56.34%), Postives = 160/268 (59.70%), Query Frame = 0


Query: 1   MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPR 60
           MIPQALTVPQSNPPPSILPFLTAFS+VIV+FI+IIIFSVVASFAII+ IYVIC+YLIG  
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGST 60

Query: 61  SLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-MERSESNAWRESMERTTMIE 120
           SLD H S+LEAGE NENQ MITRSRIL   HQTSSHGRD MERSESNAWRE MERT MIE
Sbjct: 61  SLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERTIMIE 120

Query: 121 KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQK------------------------- 180
           KVAAPVSYGSSEA  KCIDCAICLEDFENGELCQ                          
Sbjct: 121 KVAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPGFSESEQRGNRNEEMTMTTTTVA 180

Query: 181 ----------------------------------------------------------FP 182
                                                                     FP
Sbjct: 181 TTMVADPEERNRQLQMAMEKLTKPSAYYNCEENDESPSTLSECTICLEDLGERVSCRVFP 240

[Close]

BLAST of PI0004533 vs. NCBI nr
Match: KAG6600727.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-52
Identity = 119/193 (61.66%), Postives = 139/193 (72.02%), Query Frame = 0


Query: 1   MIPQAL-TVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGP 60
           MIPQAL TVPQSNPPPS LPFLTAFS+VIV+ ISI+IFS++ASF+IIIFI+V+CQYLIG 
Sbjct: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60

Query: 61  RSLDEHGSDLEAGETNENQRMITRSRILHQTSSHGRDMERSESNAWRESMERT------- 120
            +LD H  D+EAGE N+NQ    R R L         + R ESN WRE++ERT       
Sbjct: 61  TNLDGHHLDVEAGERNQNQNQTMRGRSL---------VSRYESNIWREALERTMAERKGR 120

Query: 121 --TMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKK 180
              ++ K+A  V YG SE  AK  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++
Sbjct: 121 RAQIVMKMATRVRYGCSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRR 180

Query: 181 NMTCPICRCSIVN 184
           NMTCPICR  I N
Sbjct: 181 NMTCPICRSPIAN 184

[Close]

BLAST of PI0004533 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 124 YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
           YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Sbjct: 93  YGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLI 151

[Close]

BLAST of PI0004533 vs. TAIR 10
Match: AT3G18930.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 129 AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
           + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Sbjct: 149 SAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202

[Close]

BLAST of PI0004533 vs. TAIR 10
Match: AT3G18930.2 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 129 AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
           + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Sbjct: 149 SAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202

[Close]

BLAST of PI0004533 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.3e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 118 VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPIC 177
           V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+C
Sbjct: 106 VFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC 165

Query: 178 RCSI 182
           R ++
Sbjct: 166 RSNL 169

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BLAST of PI0004533 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 85  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICL 144
           RI  + +S  +    S +NA    +   T ++K A    PV  YGS     K  +C ICL
Sbjct: 59  RITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICL 118

Query: 145 EDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV 183
            DFE+GE  +  P CNH FH  CI  WL    +CP CR S++
Sbjct: 119 GDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160

The following BLAST results are available for this feature:

BLAST of PI0004533 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZV8	2.6e-10	47.46	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q67YI6	3.3e-10	44.44	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
Q8W571	7.4e-10	42.19	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q8RX29	1.7e-09	42.37	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9SG96	1.7e-09	38.24	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]

BLAST of PI0004533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZF7	5.4e-88	91.05	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L6M6	1.8e-83	88.30	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 P...	[more]
A0A5D3BTV2	4.9e-65	89.24	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
E5GBS2	1.1e-64	88.61	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A251PMJ1	4.8e-20	34.92	RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G182700 ...	[more]

BLAST of PI0004533 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060638.1	1.1e-87	91.05	putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]	[more]
TYK02232.1	1.0e-64	89.24	putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]	[more]
ADN33914.1	2.3e-64	88.61	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_011652743.1	1.8e-61	56.34	uncharacterized protein LOC105435076 [Cucumis sativus] >KGN56259.2 hypothetical ...	[more]
KAG6600727.1	2.6e-52	61.66	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of PI0004533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01880.1	1.8e-11	47.46	RING/U-box superfamily protein	[more]
AT3G18930.1	2.4e-11	44.44	RING/U-box superfamily protein	[more]
AT3G18930.2	2.4e-11	44.44	RING/U-box superfamily protein	[more]
AT4G40070.1	5.3e-11	42.19	RING/U-box superfamily protein	[more]
AT3G10910.1	1.2e-10	38.24	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 136..177 e-value: 5.5E-6 score: 35.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 135..178 e-value: 1.4E-13 score: 50.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 136..178 score: 12.946621
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 75..183 e-value: 5.1E-19 score: 69.7
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 14..181
None	No IPR available	PANTHER	PTHR45798:SF72	ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED	coord: 14..181
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 135..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004533.1	PI0004533.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane