![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
PI0004522 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGAACTTTTTTCCAATTGAGAACAGAAAATTCAAAGCCCTAATCTTCTCCATTCCTGAATCCAATGAATACCCCGTCCCCAGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCAATGTCGCTTGACGATTTTCGCTTCCCCTCTAATTTAATTTCCGTACCAGAGCGCAAGGACGAGGCGATGACCGGTTAGTTTCCTTTTTTCACAATCTCCTTCGAGTTTCCACCTTTTTTTTTCTTTTGGGGTTTAGACTTTGATTTGATTGCTGTGGAACCGATAAACTGACGAAATGCTACCACATAAATTTTCATACTAATTTTAAAAGTTTATGGGGTGGGTGGAATTAGAAGTAAATCAGGGATAAGAACTTGAATGTATATCTTTTTGAGTTTACTACAAGCTAAGAAAAGGATTTAAGAGGGGCAAAATTTCCTTCTTAGCATTTTGGCTAACTCTGCAATGAATGATGCGGTTACTACTAACAACAGAGCAGGGAGTGGAACTTCTTTATTTTATTTTATTATTATTATTATTTTATTTTATTTTTTTGCATCTTCTAGAGAGAATTCTTGAGATGGTAATTTAAGTAATCATTGATAAGCCAATATCTAATCTAACACGTCTTTTTGTGGTGAGTAATTAGATAGTCTCTCCCCTGGCCAAAAAGAAAAAGGATTTTATGTACTCTAAATGGGATAATTCTTTGATGAATCTTTTTCATTTAGTATGAAGGACGGTGAATTTACTAAAAGAGTTAAGGAATAGATGATCCAGTCTTGTTCTTCATCAATTTGTTTTAAATTTCCATGTAAAATGTACCCAATATAGTAGTCTAAGAAGCACATATACGACAACACATTATTTTCTTTTTATAATCTAGCACTCGGACACTACGAGAACACGTTTATTATAATGTAAAGTTTCAAAATATATATCATCTTTTTAGAAGGAAATTCATAGTTAATGAGTTTATGCATTTATATGCTTAGAGAGTTAGTTCGATTTATTTCACTCTCAAAATTTATTATTTTTGTCATATATGTGTCTATGGAGTATACTTGACAAGTAATTGATAATTGATGCATGTTTAACAAATATTGGACCTACTTTGGCTCTGTACAACTGGTGTCTACTGGATCTATTGCATTCACAAGTATCCAAAACATGCTCAACGAGTCTCAAAGTTTTCAAGTAATCGGTATGGACATTTTGGCCAAACTAAAGTGAAGCAATTTTGGCCAAACTAAAGTGTTTGTGCTTCTTATATATTGGTTTTTCATTGTTTCCTTTCTGGAGAGATTAATGTAGATGCTCTGTTGAAATGTTTTGATGTTTCCCACTTGTGTTATGTTTGAGCGTTTGTTGATTAAGAGGGATAGGTGATTATAATTTGAATGGAACATTGTAATGTCTTTTTGCATCCTACGCATATTGGTTAATGATTGAAGCACTTCCTCTTAAGGTTTGAGTTTTCTGTTGGTTGCAGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTCAGTTATTCAATTATCTGACTTCTACATTCCACATTCTCATACTAATGTAACAATGTAAACTTGTACACATCCAGACACGATGAGCATAGTCTGTCCTTTGAATTCATATCCAAAGTAGAAAATGTTCATGTATTTGTCTATGGATGTGTGTTGCAAGATTGTGCATGTTTTACAAAAAGGGTATTACCTGACATTGGAAGATTACTTGAAAGAATGATTTGAGAAGTTGAACCAACTGATTCCTAAATTATGCTCTGCTGTGAATGTGGGATCTTTTTTTCTTTTTCAGTTAACAATAATTTCGAGTTTTGAACTAGTTGCATTTGCAGTATGTGAAGACTTCATGTTGAAATATGAGATATTTCCTCGATGCTGTGTGTAAGAGGTCTTGTGATGGATGTTCAGTTTCAATTGTTCATTACTGCCAACTTTTCTCTGAAGAACTACTTGAATAAAACAGTGTAGTTTTGAGTTATTTATGCAAATTATGCTGCCATTTTCTTGACTGCTCAATATTTGCGCTTTCAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGAGAAAAGAAGGTAATGGATCAGATTGATGAGAATGATCTTCATCTTGTAGAAATCTTGTGATTGTGCTGCCTTTGGACAATACTGGGTTTCATTTATCCAATCAAGTAATCAATTCCTCTTTTTCAATCTATAATTTTTTTTTCTGTAGATGTAAAGGGTTTGCAAATACTTGTCCAAATGAAATCTTGCTTCTTACATAGGATTACGTGAAACACCACTTCTGACCTCTTATTAGGTCAATTTTGTCAAGTGCTTAAAAAAATGTTTTTAAGCACTTAAAATGTCAATCAAATAGATTCTTAACATCGATGAAAGGATTTAATTCATCCATCAGACATACAGATCTAGTGCTGTTGGCATCCCATAATTGACGATTAATTCATAAAACATCTCATCTTAGGCTCATGGAGATCTGTACCTTAATTGAAATTTAATGGAATTCTTGTGGTATTTTATAAAGTTGTCAATTTATA ATTTGAACTTTTTTCCAATTGAGAACAGAAAATTCAAAGCCCTAATCTTCTCCATTCCTGAATCCAATGAATACCCCGTCCCCAGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCAATGTCGCTTGACGATTTTCGCTTCCCCTCTAATTTAATTTCCGTACCAGAGCGCAAGGACGAGGCGATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGAGAAAAGAAGGTAATGGATCAGATTGATGAGAATGATCTTCATCTTGTAGAAATCTTGTGATTGTGCTGCCTTTGGACAATACTGGGTTTCATTTATCCAATCAAGTAATCAATTCCTCTTTTTCAATCTATAATTTTTTTTTCTGTAGATGTAAAGGGTTTGCAAATACTTGTCCAAATGAAATCTTGCTTCTTACATAGGATTACGTGAAACACCACTTCTGACCTCTTATTAGGTCAATTTTGTCAAGTGCTTAAAAAAATGTTTTTAAGCACTTAAAATGTCAATCAAATAGATTCTTAACATCGATGAAAGGATTTAATTCATCCATCAGACATACAGATCTAGTGCTGTTGGCATCCCATAATTGACGATTAATTCATAAAACATCTCATCTTAGGCTCATGGAGATCTGTACCTTAATTGAAATTTAATGGAATTCTTGTGGTATTTTATAAAGTTGTCAATTTATA ATGAATACCCCGTCCCCAGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCAATGTCGCTTGACGATTTTCGCTTCCCCTCTAATTTAATTTCCGTACCAGAGCGCAAGGACGAGGCGATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGAGAAAAGAAGGTAATGGATCAGATTGA MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLSSKRQKRKEGNGSD Homology
BLAST of PI0004522 vs. ExPASy Swiss-Prot
Match: Q9C613 (Protein SAMBA OS=Arabidopsis thaliana OX=3702 GN=SAMBA PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.7e-22 Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of PI0004522 vs. ExPASy TrEMBL
Match: A0A1S3CQ80 (uncharacterized protein LOC103503566 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503566 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53 Identity = 109/113 (96.46%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of PI0004522 vs. ExPASy TrEMBL
Match: A0A6J1BQF8 (protein SAMBA isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004506 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 6.0e-50 Identity = 102/113 (90.27%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of PI0004522 vs. ExPASy TrEMBL
Match: A0A6J1HIC3 (protein SAMBA isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463853 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 97/111 (87.39%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of PI0004522 vs. ExPASy TrEMBL
Match: A0A6J1HU80 (protein SAMBA isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466897 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.9e-46 Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of PI0004522 vs. ExPASy TrEMBL
Match: A0A0A0LK11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901060 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.3e-39 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of PI0004522 vs. NCBI nr
Match: XP_004136197.1 (protein SAMBA isoform X1 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of PI0004522 vs. NCBI nr
Match: XP_008466002.1 (PREDICTED: uncharacterized protein LOC103503566 isoform X1 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 5.4e-53 Identity = 109/113 (96.46%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of PI0004522 vs. NCBI nr
Match: XP_038888367.1 (protein SAMBA isoform X1 [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 6.0e-52 Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of PI0004522 vs. NCBI nr
Match: XP_022131247.1 (protein SAMBA isoform X1 [Momordica charantia]) HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49 Identity = 102/113 (90.27%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of PI0004522 vs. NCBI nr
Match: XP_023553751.1 (protein SAMBA isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.3 bits (508), Expect = 8.9e-48 Identity = 98/111 (88.29%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of PI0004522 vs. TAIR 10
Match: AT1G32310.1 (unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 4.8e-23 Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|