PI0004429 (gene) Melon (PI 482460) v1

Overview


Name	PI0004429
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr06: 10347846 .. 10349013 (+)
RNA-Seq Expression	PI0004429
Synteny	PI0004429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTTCTTCCAGGCCTCAGAACACTAACATAAAGGTGTATTTCAAGAGACTTGAGTCGAAGCGAGCACAACCACGCAGCGACGATGAAGCAGTTGCTCCCAGCTACACCATCCTAAAACATGGTAAGGGTAAAGTGTTGCTGGAGCGATTGCTGGAAATCGAGAACTTCAATAACGAACTGGAGGTGGAAGTCGATGATAGGAGTGCAGTACTTGCGTTCCTCGTAGAGAGAAAGAGAAAAAGAGTTGAAGAGGAAAAGGAAAGAAAGGTGGCTAAGGAACGCCAAAGGGAAGAATAGGAAAGAGAGCAAAAAGAATTCGAGGAACGCCGGATGGCAGGGGCCAAACGTCCTGAAGAACGCTCACCGTCCAACAAAGTCGCCTTGATTCATTAGAAAATCAAGGAAAAGCTCTCAAAGGTCTCTTTTCAGAAAACAAAGGAGACGATGATGGTGCTCAAGACTGCCATCCAAAATAAGGATAAGAACAAAATGTTGCTCGCCCAATTGGACAAGCAGGTTGTGAAGCTCCCAGCGAAATGCAAGGCGCTGGGAGGAGAGAAAGATGACCTTGAAGCCTTGGCGGAGGACTTCGAGGAAGAGCTAGAGGTGATGAGCCTAGTTGAACAAGGGTCATGGTGTAAGATAAAATAGGGGGCTGCCAGGCCATCCAAGATAAAGAAGAAAATGGGGACATCCAGACCTAAAGAGCCCCAACTCGGTGGCGATGATGCGAAGATGAAAGAACCCTCCATTAACACAATCATCAAGATAAAAAATGGGCTCTTTCCCTTCAACGGACGCCTTCCAGATTTTCTCTACGCACCAATTCAGGCGTTTGGATGGAAAATGTTTTTCAAGGGACACACAAAGTTGAGGTTGGGGGTTGTCAACAAATTTTACGACGCAAAGCTTAACTCCAAAGAACATTGTCGCGTAAGTTGCATCCACACCAGCTCATCACTGAGGCAAACGTATGGCTATTCTTTATCAAGAAAAAGGTATTTCTCATGTGTCATAATAGTTCAATCAACCTGGAGTCTACCATGCTCCTCTACTGCATCCTCAAGCGATGGAGGGTCAACCTAAGCGCGATAATCAGCATCGTCATCCTTTCTTGGATGGAATCGCCCAAGGACGTCATGCCCTTCCTTTCCACTGTTGA

mRNA sequence

ATGGCAAGTTCTTCCAGGCCTCAGAACACTAACATAAAGGTGTATTTCAAGAGACTTGAGTCGAAGCGAGCACAACCACGCAGCGACGATGAAGCAGTTGCTCCCAGCTACACCATCCTAAAACATGGTAAGGGTAAAGTGTTGCTGGAGCGATTGCTGGAAATCGAGAACTTCAATAACGAACTGGAGGTGGAAGTCGATGATAGGAGTGCAGTACTTGCGTTCCTCGTAGAGAGAAAGAGAAAAAGAGTTGAAGAGGAAAAGGAAAGAAAGAAAACAAAGGAGACGATGATGGTGCTCAAGACTGCCATCCAAAATAAGGATAAGAACAAAATGTTGCTCGCCCAATTGGACAAGCAGGTTGTGAAGCTCCCAGCGAAATGCAAGGCGCTGGGAGGAGAGAAAGATGACCTTGAAGCCTTGGCGGAGGACTTCGAGGAAGAGCTAGAGGGGGCTGCCAGGCCATCCAAGATAAAGAAGAAAATGGGGACATCCAGACCTAAAGAGCCCCAACTCGGTGGCGATGATGCGAAGATGAAAGAACCCTCCATTAACACAATCATCAAGATAAAAAATGGGCTCTTTCCCTTCAACGGACGCCTTCCAGATTTTCTCTACGCACCAATTCAGGCGTTTGGATGGAAAATGTTTTTCAAGGGACACACAAAGTTGAGGTTGGGGGTTGTCAACAAATTTTACGACGCAAAGCTTAACTCCAAAGAACATTGTCGCTTCAATCAACCTGGAGTCTACCATGCTCCTCTACTGCATCCTCAAGCGATGGAGGGTCAACCTAAGCGCGATAATCAGCATCGTCATCCTTTCTTGGATGGAATCGCCCAAGGACGTCATGCCCTTCCTTTCCACTGTTGA

Coding sequence (CDS)

ATGGCAAGTTCTTCCAGGCCTCAGAACACTAACATAAAGGTGTATTTCAAGAGACTTGAGTCGAAGCGAGCACAACCACGCAGCGACGATGAAGCAGTTGCTCCCAGCTACACCATCCTAAAACATGGTAAGGGTAAAGTGTTGCTGGAGCGATTGCTGGAAATCGAGAACTTCAATAACGAACTGGAGGTGGAAGTCGATGATAGGAGTGCAGTACTTGCGTTCCTCGTAGAGAGAAAGAGAAAAAGAGTTGAAGAGGAAAAGGAAAGAAAGAAAACAAAGGAGACGATGATGGTGCTCAAGACTGCCATCCAAAATAAGGATAAGAACAAAATGTTGCTCGCCCAATTGGACAAGCAGGTTGTGAAGCTCCCAGCGAAATGCAAGGCGCTGGGAGGAGAGAAAGATGACCTTGAAGCCTTGGCGGAGGACTTCGAGGAAGAGCTAGAGGGGGCTGCCAGGCCATCCAAGATAAAGAAGAAAATGGGGACATCCAGACCTAAAGAGCCCCAACTCGGTGGCGATGATGCGAAGATGAAAGAACCCTCCATTAACACAATCATCAAGATAAAAAATGGGCTCTTTCCCTTCAACGGACGCCTTCCAGATTTTCTCTACGCACCAATTCAGGCGTTTGGATGGAAAATGTTTTTCAAGGGACACACAAAGTTGAGGTTGGGGGTTGTCAACAAATTTTACGACGCAAAGCTTAACTCCAAAGAACATTGTCGCTTCAATCAACCTGGAGTCTACCATGCTCCTCTACTGCATCCTCAAGCGATGGAGGGTCAACCTAAGCGCGATAATCAGCATCGTCATCCTTTCTTGGATGGAATCGCCCAAGGACGTCATGCCCTTCCTTTCCACTGTTGA

Protein sequence

MASSSRPQNTNIKVYFKRLESKRAQPRSDDEAVAPSYTILKHGKGKVLLERLLEIENFNNELEVEVDDRSAVLAFLVERKRKRVEEEKERKKTKETMMVLKTAIQNKDKNKMLLAQLDKQVVKLPAKCKALGGEKDDLEALAEDFEEELEGAARPSKIKKKMGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAKLNSKEHCRFNQPGVYHAPLLHPQAMEGQPKRDNQHRHPFLDGIAQGRHALPFHC

Homology

[Close]

BLAST of PI0004429 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-12
Identity = 74/235 (31.49%), Postives = 112/235 (47.66%), Query Frame = 0


Query: 27  RSDDEAVAPSYTILKHGKGKVLLERLLEIENFNNELEVEVDDRSAVLAFLVERKRKRVEE 86
           R DD    P    LKH   KVL+      +      +VE + R        ERK+++ +E
Sbjct: 91  RLDDN--RPKNKHLKHEANKVLVGHREASKKEVERKKVEDEKRKG-----EERKKQKKDE 150

Query: 87  EKERKKTKETMMVLKTAIQNKDKNKMLLAQLDKQVVKLPAKCK-ALGGEKDDLEALAEDF 146
           ++ ++K +E    L      K K +  LA L +QV  +  + K A   E D ++ + E+F
Sbjct: 151 DRAQRK-EEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEF 210

Query: 147 EEELEGAA-------------------RPSKIKKKMGTSRPKEPQLGGDDAKMKEPSINT 206
             E+EG +                   + SK K+K GTSRPK+ Q G    KM    ++ 
Sbjct: 211 SREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN---KMSAQKLDK 270

Query: 207 IIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAKLNSKE 242
           +IKI+ GL PFN  L +FLY  I+    + FF   TK++L +V+ FY AK +  E
Sbjct: 271 LIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNE 314

[Close]

BLAST of PI0004429 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-11
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 138 LEALAEDFEEELEGAARPSKIKKKMGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPF 197
           LE+     E+ L    RP K K K+ TSR ++ Q       + +  ++ ++KI+ GLF F
Sbjct: 4   LESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQ---TSEPLNDQKLDKLLKIEKGLFLF 63

Query: 198 NGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAK 237
           +G L DFLY PI+AF W+ FF+G  K+RL VVN FY  K
Sbjct: 64  SGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVK 99

[Close]

BLAST of PI0004429 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.6e-09
Identity = 73/261 (27.97%), Postives = 121/261 (46.36%), Query Frame = 0


Query: 3   SSSRPQNTNIKVYFKRLESKRAQPRSDDEAVAPSYTILKHGKG--KVLLERLLEIENFNN 62
           +S +P++++ K  F+  E  +   +S  +++  +   ++  +   K LL+   ++E    
Sbjct: 35  ASKKPESSSQK--FRPEEQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMET--- 94

Query: 63  ELEVEVDDRSAVLAFLVERKRKRVEEEKERKKTKETMMVLKTAIQNKDKNKMLLAQLDKQ 122
              + +DD       L     K +   +E  K KE    L      K K +  LA L +Q
Sbjct: 95  ---MRLDDNRPKNKHLKHEANKVLVGHREASK-KEAKTKLAEIQTTKKKKQETLASLSEQ 154

Query: 123 VVKLPAKCK-ALGGEKDDLEALAEDFEEELEGAA-------------------RPSKIKK 182
           V  +  + K A   E D ++ + E+F  E+EG +                   + SK K+
Sbjct: 155 VESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKR 214

Query: 183 KMGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKG 242
           K GTSRPK+ Q G    KM    ++ +IKI+ GL PFN  L +FLY  I+    + FF  
Sbjct: 215 KAGTSRPKDIQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIE 274

[Close]

BLAST of PI0004429 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-08
Identity = 50/135 (37.04%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 115 AQLDKQVVKLPAKCKALGGEKDDLEALAEDFE-----------EE--LEGAARPSKIKKK 174
           ++   QV+K   K K +  EK  +E   ++ E           EE  L  A +  K K K
Sbjct: 40  SKFSNQVMKYLEKLKMV--EKKKIEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNK 99

Query: 175 MGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGH 234
            GTSRPK+ Q     +KM    ++ +IKI+ GL PFNG L DFLY PI+A  W+ FF   
Sbjct: 100 AGTSRPKDVQ---KRSKMSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFMDE 159

[Close]

BLAST of PI0004429 vs. ExPASy TrEMBL
Match: A0A5D3CEC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00090 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-08
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 179 MKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAKLN 238
           M    ++ +IKI+ GL PFN  LPDFLY PI+A  W+ FF G  K+RL +++ FY  K +
Sbjct: 1   MSTQYMDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYH 60

Query: 239 SKEHCR 245
             E  R
Sbjct: 61  LDESQR 66

[Close]

BLAST of PI0004429 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-11
Identity = 74/235 (31.49%), Postives = 112/235 (47.66%), Query Frame = 0


Query: 27  RSDDEAVAPSYTILKHGKGKVLLERLLEIENFNNELEVEVDDRSAVLAFLVERKRKRVEE 86
           R DD    P    LKH   KVL+      +      +VE + R        ERK+++ +E
Sbjct: 91  RLDDN--RPKNKHLKHEANKVLVGHREASKKEVERKKVEDEKRKG-----EERKKQKKDE 150

Query: 87  EKERKKTKETMMVLKTAIQNKDKNKMLLAQLDKQVVKLPAKCK-ALGGEKDDLEALAEDF 146
           ++ ++K +E    L      K K +  LA L +QV  +  + K A   E D ++ + E+F
Sbjct: 151 DRAQRK-EEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEF 210

Query: 147 EEELEGAA-------------------RPSKIKKKMGTSRPKEPQLGGDDAKMKEPSINT 206
             E+EG +                   + SK K+K GTSRPK+ Q G    KM    ++ 
Sbjct: 211 SREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN---KMSAQKLDK 270

Query: 207 IIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAKLNSKE 242
           +IKI+ GL PFN  L +FLY  I+    + FF   TK++L +V+ FY AK +  E
Sbjct: 271 LIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNE 314

[Close]

BLAST of PI0004429 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-11
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 138 LEALAEDFEEELEGAARPSKIKKKMGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPF 197
           LE+     E+ L    RP K K K+ TSR ++ Q       + +  ++ ++KI+ GLF F
Sbjct: 4   LESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQ---TSEPLNDQKLDKLLKIEKGLFLF 63

Query: 198 NGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAK 237
           +G L DFLY PI+AF W+ FF+G  K+RL VVN FY  K
Sbjct: 64  SGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVK 99

[Close]

BLAST of PI0004429 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 9.4e-09
Identity = 73/261 (27.97%), Postives = 121/261 (46.36%), Query Frame = 0


Query: 3   SSSRPQNTNIKVYFKRLESKRAQPRSDDEAVAPSYTILKHGKG--KVLLERLLEIENFNN 62
           +S +P++++ K  F+  E  +   +S  +++  +   ++  +   K LL+   ++E    
Sbjct: 35  ASKKPESSSQK--FRPEEQAQIPKKSTTDSILNANKWMRREENIYKGLLDLKPDMET--- 94

Query: 63  ELEVEVDDRSAVLAFLVERKRKRVEEEKERKKTKETMMVLKTAIQNKDKNKMLLAQLDKQ 122
              + +DD       L     K +   +E  K KE    L      K K +  LA L +Q
Sbjct: 95  ---MRLDDNRPKNKHLKHEANKVLVGHREASK-KEAKTKLAEIQTTKKKKQETLASLSEQ 154

Query: 123 VVKLPAKCK-ALGGEKDDLEALAEDFEEELEGAA-------------------RPSKIKK 182
           V  +  + K A   E D ++ + E+F  E+EG +                   + SK K+
Sbjct: 155 VESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFPKKSKSKR 214

Query: 183 KMGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKG 242
           K GTSRPK+ Q G    KM    ++ +IKI+ GL PFN  L +FLY  I+    + FF  
Sbjct: 215 KAGTSRPKDIQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIE 274

[Close]

BLAST of PI0004429 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-08
Identity = 50/135 (37.04%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 115 AQLDKQVVKLPAKCKALGGEKDDLEALAEDFE-----------EE--LEGAARPSKIKKK 174
           ++   QV+K   K K +  EK  +E   ++ E           EE  L  A +  K K K
Sbjct: 40  SKFSNQVMKYLEKLKMV--EKKKIEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNK 99

Query: 175 MGTSRPKEPQLGGDDAKMKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGH 234
            GTSRPK+ Q     +KM    ++ +IKI+ GL PFNG L DFLY PI+A  W+ FF   
Sbjct: 100 AGTSRPKDVQ---KRSKMSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFMDE 159

[Close]

BLAST of PI0004429 vs. NCBI nr
Match: KGN64973.1 (hypothetical protein Csa_022771 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-08
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 179 MKEPSINTIIKIKNGLFPFNGRLPDFLYAPIQAFGWKMFFKGHTKLRLGVVNKFYDAKLN 238
           M    ++ +IKI+ GL  FNG LPDFLYAPI+A  W+ FF   TK++  VV+ FY  K +
Sbjct: 1   MSVHELDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFH 60

Query: 239 SKE 242
            KE
Sbjct: 61  PKE 63

The following BLAST results are available for this feature:

BLAST of PI0004429 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	5.8e-12	31.49	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7VMD3	2.9e-11	42.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DQE7	4.6e-09	27.97	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TVC2	2.3e-08	37.04	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CEC7	3.9e-08	45.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0004429 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038829.1	1.2e-11	31.49	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0066935.1	5.9e-11	42.42	hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa]	[more]
TYK25768.1	9.4e-09	27.97	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0045335.1	4.7e-08	37.04	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KGN64973.1	4.7e-08	49.21	hypothetical protein Csa_022771 [Cucumis sativus]	[more]

BLAST of PI0004429 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004429.1	PI0004429.1	mRNA