PI0004410 (gene) Melon (PI 482460) v1

Overview


Name	PI0004410
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein of unknown function (DUF3317)
Location	chr09: 20307853 .. 20310033 (+)
RNA-Seq Expression	PI0004410
Synteny	PI0004410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATGGGGGGTTTTTCTTCTTTTGAACATTTATGGAACCGGTTCTGTTTGAGAGCTATTAGTTTTCGTGTTTATGGGTCTCTAGATCTGTATTTGGTTATAGAATTTGACTTTGAAGGAATCCGAAAATAGAAATTTGGGATCCCCCCTTGTGATAAATTTACGTTTACTGCTATTTGGTGAAGCTTGATCCAGAAGTTTGGCAGTAAAATATAGCCTTTATCACATTACCTTTTGAAGTTTGATTGTACATTACATCTCGAAGTTTCATTGTTAAACTGCCATACTTATTGATTCATCATCCATTTCCTCATACTTCCATGACCTAAATTTTATAATGATTTTGACCTGGGTGGTTGCTTCTTGCTTGTAGGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTATTCTTAGGGATATTTGATCTGTTTTATCATTTCCAAGCATGCGTAGTACCATGTTTCAGATTTAAAGTTATGCCTGCCAGTATCTTTGTCCAGCCAAATAATTATTGATATTTACTGTTTCTTTTGTTGACATTAAGATTTAATATTGATTTTGCATTATTCGAGTCATGTCCTGCTGTGTGGATGATGGATATATGGTTGTCAAGTGGTTATATGTTATCTAATTTTTAATCATGCTTGTTAGGTGTGGCTGTGTCTTATGTTAACTGGATTTAGGATTTGTCTAGTTAGATATTGAATTTCATTGGTTCAATAATTGCTGTTAGATTGAATTTAGTTTGTGCAATTCTTACTTTTTGTTCTTACTATTGACCTCTTGAATTCTTCACATATTATTGTAGATACAATGGTGGTTGTGTTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTGAATGATTTGTGCAAGAGGTATTGTGTTGACCTTTACTCGACCATTTCATTTTCAGAATCGGAAAATGAAATATTTATTACATTTGATTGCACATGTTGTAGTAGACATTTGATAATCCAATGACCAAAGAAAATATGGTACCACTAGTTTCATGTGACCTTAGTCCGGCTTCGGCAAAAGCAGCAGTTACATATTTGTTCTTCTTTCTGATTTAATAATAACAAATTTTTAGACCATTAATTTATAAGAATGGAACATATAGGGGGAGAATCTAACTCCAAAGAAATCAAAATAAAACAACAGCTTGAAGTAGTAATTGAGGGATGAGGAGAGGATAGTTAAAGAACTCTCTGGAGGGAAGCTCCAAGAGGAGAATAGCAAAACAATGTCACACCAAATCTTATATGGTTCATTTCCTTTACATTTATCCTGTAATGATCTCCTGTTCATTTGTAACCAACCTTCTGAATAAATAGCCTTATAGTTTCTGAAGATCTATGTTTGGCCAATCCAACACAAGTAAAAGAACTTCATCTTGGAGCAAAATTATGCTATAACTGTCAGTAGTTTTTTAGTTGGAAACGTCTTCAAAGAAAAGAAGGGAAAAAATGATTTTCAGTTGGAAACTGAAGCAGGAATCTCAATCTCCTCTCTTATTGAAAAGGATATTTAGTCTTAGGATGTATTTAGGATTGTTTCTCAAGTAATGACTTTTGGAATGAATGGAAAATTATTTGGGTACTTGGTTCTATACTCTGCGATGGTTTCTTACATAGCACTTTAAGGTGCTTATATGTTTTTTTGAAACATGAAAATTTTTAGAAGACTGTTGCCAAAGACACTCTCAACGATGGCCTTCATCACACATTGCTCCAATTATCATTTGTTATTCTTACAAAACACTCTCAAGACTATCATTTATTATGCTTTTACTTGTGCAAATCTTTATCTCCTCTGAGTCTCATTGACAGTATGGTCATTGGCAGCATGAAACCTTTTTTATTTTTTGAATCATAAGTCAATCAAGAACGTGATTTTCATACAATCAAAATTCGTTACTATTCTGTCAGTTTTTCTTCTTTATCGTTTCATATGCAGCCGTTGTAATTGATTACTGTTCTTTTTTTGTTATCTAATGCCATACCAACCAGATTGCACTGTTAACCTTCTCTTTCTTAATTATATATCTTCCTCCCATCACGTGCATCTCAGGTATCTGTGGCAAGGCAAGGCGTAG

mRNA sequence

ATGGCAAATGGGGGGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACAATGGTGGTTGTGTTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTGAATGATTTGTGCAAGAGGTATCTGTGGCAAGGCAAGGCGTAG

Coding sequence (CDS)

ATGGCAAATGGGGGGTTTTCTATAGCCATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACAATGGTGGTTGTGTTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTGAATGATTTGTGCAAGAGGTATCTGTGGCAAGGCAAGGCGTAG

Protein sequence

MANGGFSIAMNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGKA

Homology

[Close]

BLAST of PI0004410 vs. ExPASy TrEMBL
Match: A0A1S3C9L1 (uncharacterized protein LOC103498548 OS=Cucumis melo OX=3656 GN=LOC103498548 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVND+CKRYLWQ K
Sbjct: 1  MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAK 59

[Close]

BLAST of PI0004410 vs. ExPASy TrEMBL
Match: A0A6J1JYU1 (uncharacterized protein LOC111489112 OS=Cucurbita maxima OX=3661 GN=LOC111489112 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-25
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVNDL KR+LWQGK
Sbjct: 1  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGK 59

[Close]

BLAST of PI0004410 vs. ExPASy TrEMBL
Match: A0A6J1FLX2 (uncharacterized protein LOC111445419 OS=Cucurbita moschata OX=3662 GN=LOC111445419 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-25
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVNDL KR+LWQGK
Sbjct: 1  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGK 59

[Close]

BLAST of PI0004410 vs. ExPASy TrEMBL
Match: A0A6J1BY20 (uncharacterized protein LOC111006754 OS=Momordica charantia OX=3673 GN=LOC111006754 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKR 63
          MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGS+YVNDLCKR
Sbjct: 1  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSQYVNDLCKR 53

[Close]

BLAST of PI0004410 vs. ExPASy TrEMBL
Match: A0A6P5SRN0 (uncharacterized protein LOC110758739 OS=Prunus avium OX=42229 GN=LOC110758739 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.5e-22
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLW 66
          MNW+QRKIYLYNVTFGLYMLDWWER LFNT+VVVLMWF+FYNGSRYV + CKR+LW
Sbjct: 1  MNWVQRKIYLYNVTFGLYMLDWWERYLFNTLVVVLMWFIFYNGSRYVTEFCKRHLW 56

[Close]

BLAST of PI0004410 vs. NCBI nr
Match: XP_004141475.1 (uncharacterized protein LOC101207494 [Cucumis sativus] >KAE8648948.1 hypothetical protein Csa_008788 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGKA 69
          MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVND+CKRYLWQ KA
Sbjct: 1  MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKA 60

[Close]

BLAST of PI0004410 vs. NCBI nr
Match: KAG6578536.1 (hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 6   FSIAMNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLW 65
           FSI MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVNDL KR+LW
Sbjct: 46  FSIVMNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLW 105

Query: 66  QGK 69
           QGK
Sbjct: 106 QGK 108

[Close]

BLAST of PI0004410 vs. NCBI nr
Match: XP_008459402.1 (PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_008459403.1 PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_016902393.1 PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 4.5e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVND+CKRYLWQ K
Sbjct: 1  MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAK 59

[Close]

BLAST of PI0004410 vs. NCBI nr
Match: XP_038889912.1 (uncharacterized protein LOC120079682 [Benincasa hispida])

HSP 1 Score: 127.5 bits (319), Expect = 4.5e-26
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVNDLCKR+LWQGK
Sbjct: 1  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKRHLWQGK 59

[Close]

BLAST of PI0004410 vs. NCBI nr
Match: XP_022939543.1 (uncharacterized protein LOC111445419 [Cucurbita moschata] >XP_022992929.1 uncharacterized protein LOC111489112 [Cucurbita maxima])

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYLWQGK 69
          MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVNDL KR+LWQGK
Sbjct: 1  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGK 59

[Close]

BLAST of PI0004410 vs. TAIR 10
Match: AT2G30942.1 (Protein of unknown function (DUF3317) )

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-22
Identity = 43/55 (78.18%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYL 65
          MNW+QRKIYLYNVTFGLYMLDWWER LFN++V++LMWF+ YNGSRY ++LCKR+L
Sbjct: 1  MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVLILMWFILYNGSRYFSELCKRHL 55

[Close]

BLAST of PI0004410 vs. TAIR 10
Match: AT1G06515.1 (Protein of unknown function (DUF3317) )

HSP 1 Score: 97.4 bits (241), Expect = 4.6e-21
Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYL 65
          MNW+QRKIYLYNVTFGLYMLDWWER LFN++VVVLMWF+ YNG+RY ++L +R+L
Sbjct: 1  MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHL 55

[Close]

BLAST of PI0004410 vs. TAIR 10
Match: AT1G06515.2 (Protein of unknown function (DUF3317) )

HSP 1 Score: 97.4 bits (241), Expect = 4.6e-21
Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 10 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDLCKRYL 65
          MNW+QRKIYLYNVTFGLYMLDWWER LFN++VVVLMWF+ YNG+RY ++L +R+L
Sbjct: 1  MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHL 55

The following BLAST results are available for this feature:

BLAST of PI0004410 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9L1	2.2e-26	96.61	uncharacterized protein LOC103498548 OS=Cucumis melo OX=3656 GN=LOC103498548 PE=...	[more]
A0A6J1JYU1	5.4e-25	93.22	uncharacterized protein LOC111489112 OS=Cucurbita maxima OX=3661 GN=LOC111489112...	[more]
A0A6J1FLX2	5.4e-25	93.22	uncharacterized protein LOC111445419 OS=Cucurbita moschata OX=3662 GN=LOC1114454...	[more]
A0A6J1BY20	2.5e-22	96.23	uncharacterized protein LOC111006754 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6P5SRN0	9.5e-22	85.71	uncharacterized protein LOC110758739 OS=Prunus avium OX=42229 GN=LOC110758739 PE...	[more]

BLAST of PI0004410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141475.1	1.2e-26	96.67	uncharacterized protein LOC101207494 [Cucumis sativus] >KAE8648948.1 hypothetica...	[more]
KAG6578536.1	2.0e-26	92.06	hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008459402.1	4.5e-26	96.61	PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_008459403.1 P...	[more]
XP_038889912.1	4.5e-26	96.61	uncharacterized protein LOC120079682 [Benincasa hispida]	[more]
XP_022939543.1	1.1e-24	93.22	uncharacterized protein LOC111445419 [Cucurbita moschata] >XP_022992929.1 unchar...	[more]

BLAST of PI0004410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30942.1	1.1e-22	78.18	Protein of unknown function (DUF3317)	[more]
AT1G06515.1	4.6e-21	76.36	Protein of unknown function (DUF3317)	[more]
AT1G06515.2	4.6e-21	76.36	Protein of unknown function (DUF3317)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024512	Small subunit of serine palmitoyltransferase-like	PFAM	PF11779	SPT_ssu-like	coord: 10..61 e-value: 1.1E-24 score: 85.7
None	No IPR available	PANTHER	PTHR33727:SF18	PROTEIN, PUTATIVE (DUF3317)-RELATED	coord: 6..62
None	No IPR available	PANTHER	PTHR33727	OS07G0446900 PROTEIN	coord: 6..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004410.1	PI0004410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane