PI0004313 (gene) Melon (PI 482460) v1

Overview
NamePI0004313
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr06: 19799031 .. 19799942 (+)
RNA-Seq ExpressionPI0004313
SyntenyPI0004313
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGATAGCGAACAACCACCATTCGAACTTGACCCTAAAATTGAGCGAACATTTCAGAGTAACTGGCGAAGAGCAAGGCAGAGACAAGCTAGAAGGTTGGAAAATAACAACAGAAATGCCCCTCCGCCGCATGCTGACCCAGAACCAAATGCTGCTTACATAGCACACGACTTGGATAGGCCAATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAAGCCAGGAATCGCCTACCTTACATTCGGCGAGAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAGATGATTCAGAACGCTGGACAATTCGGCGGACATACTGGGGAAGATCCACATGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCACATGCCAGGCATTTCACCTGAAGAATTGAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCAAATGCTCTGGAAGATGGCGAGCTGGAAACATGGGACCAACTAATAGAGAAATTTATGAAGAAATATTTTCCACCTCACGAAAACGCTAGAAGAAGGAAGGAGCTTATGAGCTTTCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAAAGCATGTCCCCACAATGGCATTCCTAAATGCATATTGATGGAAGTTTTCTATTTCGGACTAAACAAGGCTACACAACAGACGGTATGCTAAAAAGTACATACAACCAGATTAAGACGACGCTGGATACGATGGCCAGCAACAATGAGGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGATCAAAAGGTGATGAATGCATGGATAAGAACGCCGTGGTGGCGTTGCAAGGACAAATGACTGCGATGAACAATCTACTCAAATCAATGGCAATATTGTAG

mRNA sequence

ATGAGTGATAGCGAACAACCACCATTCGAACTTGACCCTAAAATTGAGCGAACATTTCAGAGTAACTGGCGAAGAGCAAGGCAGAGACAAGCTAGAAGGTTGGAAAATAACAACAGAAATGCCCCTCCGCCGCATGCTGACCCAGAACCAAATGCTGCTTACATAGCACACGACTTGGATAGGCCAATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAAGCCAGGAATCGCCTACCTTACATTCGGCGAGAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAGATGATTCAGAACGCTGGACAATTCGGCGGACATACTGGGGAAGATCCACATGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCACATGCCAGGCATTTCACCTGAAGAATTGAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCAAATGCTCTGGAAGATGGCGAGCTGGAAACATGGGACCAACTAATAGAGAAATTTATGAAGAAATATTTTCCACCTCACGAAAACGCTAGAAGAAGGAAGGAGCTTATGAGCTTTCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGCTACACAACAGACGGTATGCTAAAAAGTACATACAACCAGATTAAGACGACGCTGGATACGATGGCCAGCAACAATGAGGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGATCAAAAGGTGATGAATGCATGGATAAGAACGCCGTGGTGGCGTTGCAAGGACAAATGACTGCGATGAACAATCTACTCAAATCAATGGCAATATTGTAG

Coding sequence (CDS)

ATGAGTGATAGCGAACAACCACCATTCGAACTTGACCCTAAAATTGAGCGAACATTTCAGAGTAACTGGCGAAGAGCAAGGCAGAGACAAGCTAGAAGGTTGGAAAATAACAACAGAAATGCCCCTCCGCCGCATGCTGACCCAGAACCAAATGCTGCTTACATAGCACACGACTTGGATAGGCCAATTAGATCTTATGCGGCACCCAACCTCTACAACTTTAAGCCAGGAATCGCCTACCTTACATTCGGCGAGAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAGATGATTCAGAACGCTGGACAATTCGGCGGACATACTGGGGAAGATCCACATGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCACATGCCAGGCATTTCACCTGAAGAATTGAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCAAATGCTCTGGAAGATGGCGAGCTGGAAACATGGGACCAACTAATAGAGAAATTTATGAAGAAATATTTTCCACCTCACGAAAACGCTAGAAGAAGGAAGGAGCTTATGAGCTTTCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGCTACACAACAGACGGTATGCTAAAAAGTACATACAACCAGATTAAGACGACGCTGGATACGATGGCCAGCAACAATGAGGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGATCAAAAGGTGATGAATGCATGGATAAGAACGCCGTGGTGGCGTTGCAAGGACAAATGACTGCGATGAACAATCTACTCAAATCAATGGCAATATTGTAG

Protein sequence

MSDSEQPPFELDPKIERTFQSNWRRARQRQARRLENNNRNAPPPHADPEPNAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIEKFMKKYFPPHENARRRKELMSFQQKDRENLHDAWSYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMDKNAVVALQGQMTAMNNLLKSMAIL
Homology
BLAST of PI0004313 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-36
Identity = 95/263 (36.12%), Postives = 130/263 (49.43%), Query Frame = 0

Query: 51  NAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTG 110
           N   +A D  R IR YAAP      PGI      +  +FE+K VM QM+Q  GQF G   
Sbjct: 11  NPIILADDRARAIREYAAPMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSGMPT 70

Query: 111 EDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIE 170
           EDPH H+RSF  +  SF + G+S E LR  LFP +LRD A+ W N L    +  W+ L E
Sbjct: 71  EDPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAE 130

Query: 171 KFMKKYFPPHENARRRKELMSFQQKDRENLHDAW-------------------------- 230
           KF++KYFPP  NA+ R E+MSFQQ + E+  DAW                          
Sbjct: 131 KFLRKYFPPTRNAKFRSEIMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETFYN 190

Query: 231 -----------SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMD 277
                      +     +L  +YN+    L+T+ASNN +W       R     K    ++
Sbjct: 191 GLNAASRMVLDASANGAILSKSYNEAFEILETIASNNYQWS----NTRAPTSRKVAGVLE 250

BLAST of PI0004313 vs. ExPASy TrEMBL
Match: A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.3e-33
Identity = 74/108 (68.52%), Postives = 83/108 (76.85%), Query Frame = 0

Query: 37  NNRNAPPPHADPEPNAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVML 96
           NN+  P   A    N  Y+A D DRPIRSYA+PNLY+F PGIAY TF EN RFEIK VML
Sbjct: 5   NNQGIPANQAAQGANPTYLADDRDRPIRSYASPNLYDFNPGIAYPTFSENTRFEIKLVML 64

Query: 97  QMIQNAGQFGGHTGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPL 145
           Q+IQNAGQF  H  +DPH++IR+FYSICASFHMPGIS EELRFT F L
Sbjct: 65  QIIQNAGQFRRHPRKDPHDYIRNFYSICASFHMPGISVEELRFTPFRL 112

BLAST of PI0004313 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.2e-32
Identity = 87/262 (33.21%), Postives = 134/262 (51.15%), Query Frame = 0

Query: 51  NAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTG 110
           NA  +A D +R IR+YA P +    P I      +   FE+K VM QM+Q  GQF G   
Sbjct: 31  NAIQLADDRERAIRAYAHPAVDELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 90

Query: 111 EDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIE 170
           EDPH H++SF  +  SF   G+  + +R +LFP +LRD AK W N L    +++W+ L E
Sbjct: 91  EDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSLAE 150

Query: 171 KFMKKYFPPHENARRRKELMSFQQKDRENLHDAW-------------------------- 230
           KF+ KYFPP  NAR R E+++FQQ + E L +AW                          
Sbjct: 151 KFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 210

Query: 231 -----------SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMD 276
                      +     ML  TYN+    L+ +ASNN +W   D  +  G +++G   ++
Sbjct: 211 GLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQW--ADVRSNPGKKTRG--VLE 270

BLAST of PI0004313 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31
Identity = 85/263 (32.32%), Postives = 136/263 (51.71%), Query Frame = 0

Query: 51  NAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTG 110
           NA ++A D +R IR+YA P +    P I      +   FE+K VM QM+Q  GQF G   
Sbjct: 40  NAIHLADDRERAIRAYAHPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 99

Query: 111 EDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIE 170
           EDPH H++SF  +  SF    +  + +R +LFP +LRD AK W N L  G +++W+ L+E
Sbjct: 100 EDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVE 159

Query: 171 KFMKKYFPPHENARRRKELMSFQQKDRENLHDAW-------------------------- 230
           KF+ KYFPP  NAR R E++ FQQ + + L +AW                          
Sbjct: 160 KFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 219

Query: 231 -----------SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMD 277
                      +     +L  TYN+    L+ +ASNN +W   D  +  G +++G   ++
Sbjct: 220 GLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQW--ADVRSNPGRKTRG--VLE 279

BLAST of PI0004313 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 107/339 (31.56%), Postives = 152/339 (44.84%), Query Frame = 0

Query: 11  LDPKIERTFQSNWRRARQRQARRLENNNRN-----------------APPPHADP----- 70
           LDP+IERT +    R  QR  ++LE                      A  P  DP     
Sbjct: 10  LDPEIERTLRKT--RKEQRLRKQLEXQKEREGEISPESEVESTSTSMADIPPRDPVDPPA 69

Query: 71  ------------EPNAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVML 130
                       E N   +A + D  +R YAA    NF  GI       +  FE+K +M 
Sbjct: 70  VNGNMRDHARNDEFNYIQMADNRDVAMREYAATAFQNFDSGIVN-PIPAHXNFELKPMMF 129

Query: 131 QMIQNAGQFGGHTGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANA 190
           QM+Q  G FGG   EDPH+H++SF  I  +F +PGI+ +    TLFP +L+D+A+   NA
Sbjct: 130 QMLQTIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDAXXLTLFPFSLKDQARXXLNA 189

Query: 191 LEDGELETWDQLIEKFMKKYFPPHENARRRKELMSFQQKDRENLHDAW------------ 250
              G + TW  L+EKF+ K+FPP  +A  R+E++SF+Q DRE +H+AW            
Sbjct: 190 FPXGSITTWGSLVEKFLTKFFPPTRHADIREEIISFRQYDREPVHEAWERFKELIRKCXN 249

Query: 251 ----------------SYTTDGML---------KSTYNQIKTTLDTMASNNEEWDEDDFG 277
                            + T  ML         K T+N+I   L+ +AS+NE W      
Sbjct: 250 HGLPACXQIEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQ--- 309

BLAST of PI0004313 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 223.0 bits (567), Expect = 3.2e-54
Identity = 105/222 (47.30%), Postives = 151/222 (68.02%), Query Frame = 0

Query: 1   MSDSEQPPFELDPKIERTFQSNWRRARQRQARRLENNNRNA-----------------PP 60
           MS+ + P F++DP+IERTF+   R+ +QR++ +    N +A                   
Sbjct: 2   MSEGDNPTFDIDPEIERTFRRRIRQIKQRRSNQTIEENMDAQYNQPQAPQAGVRQNANAQ 61

Query: 61  PHADPEPNAAYIAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAG 120
            HA+ + N   +AHD +RP+R YA+PNLYNF PGI   TF  N RFE+K VMLQM+Q AG
Sbjct: 62  EHANYDTNPIVLAHDRNRPMREYASPNLYNFAPGILQPTFEGNGRFEMKPVMLQMLQAAG 121

Query: 121 QFGGHTGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELE 180
           QFGG TGEDPH H++SF  IC++F M G+  + +R TLFP +LRDEA++WA + E GE+ 
Sbjct: 122 QFGGATGEDPHAHLKSFLEICSAFPMAGVPQDSIRLTLFPFSLRDEARQWAYSFEPGEIT 181

Query: 181 TWDQLIEKFMKKYFPPHENARRRKELMSFQQKDRENLHDAWS 206
           TW +++EKFM+KYFPP  +A+RR+++++F+QKD E   +AW+
Sbjct: 182 TWGKMVEKFMQKYFPPTVSAKRRRDIVTFEQKDSETFSEAWT 223

BLAST of PI0004313 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 8.3e-47
Identity = 119/319 (37.30%), Postives = 174/319 (54.55%), Query Frame = 0

Query: 1   MSDSEQPPFELDPKIERTF--QSNWRRARQRQARRLENNNRNAPPPHAD---PEPNAAYI 60
           MS    P FE +P+I+ TF  +++  RA +R+    +NNN  AP  +     P  +  ++
Sbjct: 1   MSTRTDPEFEANPEIDHTFRTRAHQNRAWRRRINMADNNNNEAPEGNQGVNRPVQDPVFL 60

Query: 61  AHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTGEDPHE 120
           A D + PIR+YAAPNLY+F PGI+     ENARFEIK VM+QMIQN  QF     E+PH 
Sbjct: 61  AADHNIPIRNYAAPNLYDFSPGISRPIVEENARFEIKPVMVQMIQNMRQFESLQCENPHA 120

Query: 121 HIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIEKFMKK 180
           H+  F  +C++F +PGI+P  +R  LFP TLRD+AKRWA++LE  E+ + DQL+E FMKK
Sbjct: 121 HLTIFVEMCSTFSIPGITPVGIRLYLFPYTLRDKAKRWAHSLEANEITSSDQLVEWFMKK 180

Query: 181 YFPPHENARRRKELMSFQQKDRENLHDAW------------------------------- 240
           +FPP  N RRRK +++F++ D E L  AW                               
Sbjct: 181 FFPPAINTRRRKNVLNFEKMDNETLSTAWVRFRRLVKNCPHIGILDCVLMEMFYNGLNRS 240

Query: 241 ------SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDEC-MDKNAV 277
                 +   +  +  TY + K  LD ++ N ++W +D +  R   R + D   +  N +
Sbjct: 241 TQAVADASAVERFMDKTYTKAKVILDRISWNMDDWVDDGYRGRGSERRRNDNAIVFANTM 300

BLAST of PI0004313 vs. NCBI nr
Match: XP_038880527.1 (uncharacterized protein LOC120072192 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 4.3e-43
Identity = 101/261 (38.70%), Postives = 151/261 (57.85%), Query Frame = 0

Query: 55  IAHDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTGEDPH 114
           +A++  RP+R YA+P LY+F PGI Y    +  RFE+K VMLQM+Q A QFGG  GEDPH
Sbjct: 1   MANNSTRPMREYASPVLYDFSPGIIY-PMPDGTRFEMKSVMLQMLQTARQFGGSHGEDPH 60

Query: 115 EHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIEKFMK 174
            H++ F   C  F +P I+PE++R +LFP +LRD+AK+W ++LE  E+ TW++L+EKFM+
Sbjct: 61  AHMKRFLETCNFFVIPRITPEKIRLSLFPNSLRDDAKQWVSSLEPEEITTWEKLVEKFMQ 120

Query: 175 KYFPPHENARRRKELMSFQQKDRENLHDAW------------------------------ 234
           KYFPP  NARRR+E+M+F+Q+D E L  A                               
Sbjct: 121 KYFPPTTNARRRREIMNFEQEDIETLSVACERFNGLVKNCPNHALLLNIQMETFYGGLNR 180

Query: 235 -------SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNR--RGGRSKGDECMDKN 277
                  +   +G++  +Y + K  L  +A +N EW +D +  R  R  RS+    +D N
Sbjct: 181 ASQIAADAAAAEGLMDKSYTEAKEILLYIAKHNMEWVDDTYDGRNDRRRRSQNINSVDAN 240

BLAST of PI0004313 vs. NCBI nr
Match: XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-38
Identity = 108/301 (35.88%), Postives = 149/301 (49.50%), Query Frame = 0

Query: 11  LDPKIERTFQSNWRRARQRQARRLENNNRNAPPPHADPEPNAAYIAHDLDRPIRSYAAPN 70
           +DP+IERTF+   +R ++++A++  N            E N   +A D  R IR YAAP 
Sbjct: 13  IDPEIERTFR---QRRKEQKAKKRCNMADGFEVGGVHNEANPIALADDRARAIREYAAPM 72

Query: 71  LYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTGEDPHEHIRSFYSICASFHMP 130
                PGI      +   FE+K VM QM+Q  GQFGG   EDPH HIRSF  +  SF + 
Sbjct: 73  FNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIRSFLEVSDSFKLQ 132

Query: 131 GISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIEKFMKKYFPPHENARRRKELM 190
           G+S E LR  LFP +LRD A+ W N L    +  W+ L EKF++KYFPP  NA+ R E+M
Sbjct: 133 GVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSEIM 192

Query: 191 SFQQKDRENLHDAW-------------------------------------SYTTDGMLK 250
           SFQQ + E   DAW                                     ++    +L 
Sbjct: 193 SFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAAARMVLDAFANGAILS 252

Query: 251 STYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMDKNAVVALQGQMTAMNNLLKS 275
            +YN+    L+ +ASNN +W      NR     K    ++ +A+ AL  QM +M N+LK+
Sbjct: 253 KSYNEAFEILERIASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNILKN 305

BLAST of PI0004313 vs. NCBI nr
Match: XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus])

HSP 1 Score: 169.5 bits (428), Expect = 4.1e-38
Identity = 108/317 (34.07%), Postives = 158/317 (49.84%), Query Frame = 0

Query: 1   MSDSEQPPFELDPKIERTFQSNWRRARQRQARR----LENNNRNAPPPHADPEPNAAYIA 60
           MS      F  DP+IERTF  N RR  QR+ ++    +++N  N   P     P  A+I 
Sbjct: 1   MSKRHPVVFAFDPEIERTF--NRRRKAQRKIKQTQVAMDDNVNNGDIPIV---PRGAFIV 60

Query: 61  HDLDRPIRSYAAPNLYNFKPGIAYLTFGENARFEIKHVMLQMIQNAGQFGGHTGEDPHEH 120
            D DR IR YAAP       GI      +  +FE+K VM QM+Q  GQF G   EDPH H
Sbjct: 61  DDKDRAIRQYAAPRFEELNSGIIRPNI-QATQFELKPVMFQMLQTIGQFSGMPTEDPHLH 120

Query: 121 IRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALEDGELETWDQLIEKFMKKY 180
           +R F  I  SF   G+  + LR  LFP ++RD A+ W N+L  G + TW+ L EKF+ KY
Sbjct: 121 LRLFMEISDSFKFQGVPEDALRLKLFPYSVRDRARTWLNSLPAGSVTTWNDLTEKFLSKY 180

Query: 181 FPPHENARRRKELMSFQQKDRENLHDAW-------------------------------- 240
           FPP+ NA+ R E+ SFQQ+D E+L+DAW                                
Sbjct: 181 FPPNMNAKLRNEINSFQQQDDESLYDAWERFKELLRKCPHHGILHCIQMETFYNGLNAQT 240

Query: 241 -----SYTTDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRSKGDECMDKNAVVA 277
                +     +L  +YNQ    L+T+A+ N +W      +R     K     D +++ +
Sbjct: 241 KMVVDASANGALLSKSYNQAYEILETIATKNYQWS----SSRAQTGKKVAGIYDVDSITS 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
U5CUI27.1e-3636.12Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... [more]
A0A5A7V2U74.3e-3368.52Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1H7E48.2e-3233.21uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1EEI21.8e-3132.32uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
A0A6J1DW021.2e-3031.56uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
WP_217833177.13.2e-5447.30retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
XP_038887458.18.3e-4737.30uncharacterized protein LOC120077591 [Benincasa hispida][more]
XP_038880527.14.3e-4338.70uncharacterized protein LOC120072192 [Benincasa hispida][more]
XP_030508936.11.1e-3835.88uncharacterized protein LOC115723589 [Cannabis sativa][more]
XP_017233063.14.1e-3834.07PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 141..205
e-value: 6.6E-10
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004313.1PI0004313.1mRNA