PI0004287 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG MCFHSTTYGCQVVPRMKGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGAWIWRLVRW Homology
BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5A7UUF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001110 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.5e-10 Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3DQP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00840 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3CVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00440 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06 Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3CFE0 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002080 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.2e-04 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of PI0004287 vs. NCBI nr
Match: KAA0058838.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK11255.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 7.2e-10 Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
BLAST of PI0004287 vs. NCBI nr
Match: TYK25868.1 (hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of PI0004287 vs. NCBI nr
Match: XP_031740114.1 (uncharacterized protein LOC105435219 [Cucumis sativus]) HSP 1 Score: 67.4 bits (163), Expect = 5.1e-08 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of PI0004287 vs. NCBI nr
Match: TYK15867.1 (hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06 Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of PI0004287 vs. NCBI nr
Match: XP_031737531.1 (uncharacterized protein LOC116402424 [Cucumis sativus]) HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04 Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|