PI0004287 (gene) Melon (PI 482460) v1

Overview
NamePI0004287
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCarboxypeptidase Y-like
Locationchr10: 3829381 .. 3829575 (-)
RNA-Seq ExpressionPI0004287
SyntenyPI0004287
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG

mRNA sequence

ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG

Coding sequence (CDS)

ATGTGTTTTCATAGCACCACCTACGGTTGTCAGGTGGTTCCGAGGATGAAAGGTCGTGACCGGAGATCCAAGAATTTGAGCATAGGTGAGGATATGGATGGAGGATTGTTATATGGCTTCGGGCCTAGCTTAACCCATGGTTGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTGGTACGATGGTAG

Protein sequence

MCFHSTTYGCQVVPRMKGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGAWIWRLVRW
Homology
BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5A7UUF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001110 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-10
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGA 57
          +G D RS+NLS+GEDMDGGL YGFGP+LTHG WLYVHIGA
Sbjct: 32 RGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGA 71

BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3DQP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00840 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGA 57
          +G +RRS+NLS+GEDMDGGL YG GPSL HG WLYVHIGA
Sbjct: 49 RGHNRRSENLSLGEDMDGGLRYGIGPSLIHGAWLYVHIGA 88

BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3CVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00440 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 17  KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGW 49
           +G DRRS+NLS+GEDMDGG  YGFGPSLTHGW
Sbjct: 191 RGCDRRSENLSLGEDMDGGSRYGFGPSLTHGW 222

BLAST of PI0004287 vs. ExPASy TrEMBL
Match: A0A5D3CFE0 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002080 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-04
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGW 49
          +GRD+RS+NLS+GED+DG   YGF PSLT+GW
Sbjct: 16 RGRDQRSENLSLGEDVDGEFSYGFEPSLTYGW 47

BLAST of PI0004287 vs. NCBI nr
Match: KAA0058838.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK11255.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 7.2e-10
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGA 57
          +G D RS+NLS+GEDMDGGL YGFGP+LTHG WLYVHIGA
Sbjct: 32 RGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGA 71

BLAST of PI0004287 vs. NCBI nr
Match: TYK25868.1 (hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGA 57
          +G +RRS+NLS+GEDMDGGL YG GPSL HG WLYVHIGA
Sbjct: 49 RGHNRRSENLSLGEDMDGGLRYGIGPSLIHGAWLYVHIGA 88

BLAST of PI0004287 vs. NCBI nr
Match: XP_031740114.1 (uncharacterized protein LOC105435219 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 5.1e-08
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0

Query: 17 KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGWWLYVHIGA 57
          + RD+RS+NLS+ EDMDGGL YGF PSLTH  WLYVHIGA
Sbjct: 58 RDRDQRSENLSLSEDMDGGLRYGFRPSLTHCGWLYVHIGA 97

BLAST of PI0004287 vs. NCBI nr
Match: TYK15867.1 (hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 17  KGRDRRSKNLSIGEDMDGGLLYGFGPSLTHGW 49
           +G DRRS+NLS+GEDMDGG  YGFGPSLTHGW
Sbjct: 191 RGCDRRSENLSLGEDMDGGSRYGFGPSLTHGW 222

BLAST of PI0004287 vs. NCBI nr
Match: XP_031737531.1 (uncharacterized protein LOC116402424 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0

Query: 17  KGRDRRSKNLSIGEDMDGG-LLYGFGPSLTHGWWLY 52
           +GRDRRS+NLS+GEDM+GG L YGFGP +THG  L+
Sbjct: 254 RGRDRRSENLSLGEDMEGGELRYGFGPIITHGGCLF 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UUF73.5e-1080.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DQP81.3e-0977.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CVC01.0e-0681.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CFE02.2e-0468.75Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0058838.17.2e-1080.00retrotransposon protein [Cucumis melo var. makuwa] >TYK11255.1 retrotransposon p... [more]
TYK25868.12.7e-0977.50hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa][more]
XP_031740114.15.1e-0875.00uncharacterized protein LOC105435219 [Cucumis sativus][more]
TYK15867.12.2e-0681.25hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa][more]
XP_031737531.13.4e-0469.44uncharacterized protein LOC116402424 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004287.1PI0004287.1mRNA