Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGCAAAGAAGAGTAGACTTCGAGTCTAAGAAGGTCAACGCGTTCTACGAATTAGAGGAAAACGAGGTGGGGCAAGTCATTTTAAAAAACCCCATAGCGCAAGACAAAAAGGACGTGTTAAAGAGAATTGCTTGGCTAGGCAGCAAGTGTGACATAATGCCAACAAGGAAGCACCAACTCTTACCGCATAATTTGAATACAAAAGCTAGTGTATGGCTTTTCTTTGTGAAGAAGAAGATCATGCCTTCGCGCCATGACAACACCATCACTTCAGACAAAGCATTGCTCCTTTACTGCATCTTGGAGGAGATACCTATCAATTTAGGCGAGATAATATGTCAACAAATCCACTCGTGGGTAAGGCACCCACGCAGCGCAAGACCATTTCCTCATTTAATCGAACAGTTGTGTTTGAAGGCATGCCCCGCGTTGAAGACTCTCCCCACAATATCCGTGAAGGATGGCCTTCGCTGA
mRNA sequence
ATGGTGAGGCAAAGAAGAGTAGACTTCGAGTCTAAGAAGGTCAACGCGTTCTACGAATTAGAGGAAAACGAGGTGGGGCAAGTCATTTTAAAAAACCCCATAGCGCAAGACAAAAAGGACGTGTTAAAGAGAATTGCTTGGCTAGGCAGCAAGTGTGACATAATGCCAACAAGGAAGCACCAACTCTTACCGCATAATTTGAATACAAAAGCTAGTGTATGGCTTTTCTTTGTGAAGAAGAAGATCATGCCTTCGCGCCATGACAACACCATCACTTCAGACAAAGCATTGCTCCTTTACTGCATCTTGGAGGAGATACCTATCAATTTAGGCGAGATAATATGTCAACAAATCCACTCGTGGGTAAGGCACCCACGCAGCGCAAGACCATTTCCTCATTTAATCGAACAGTTGTGTTTGAAGGCATGCCCCGCGTTGAAGACTCTCCCCACAATATCCGTGAAGGATGGCCTTCGCTGA
Coding sequence (CDS)
ATGGTGAGGCAAAGAAGAGTAGACTTCGAGTCTAAGAAGGTCAACGCGTTCTACGAATTAGAGGAAAACGAGGTGGGGCAAGTCATTTTAAAAAACCCCATAGCGCAAGACAAAAAGGACGTGTTAAAGAGAATTGCTTGGCTAGGCAGCAAGTGTGACATAATGCCAACAAGGAAGCACCAACTCTTACCGCATAATTTGAATACAAAAGCTAGTGTATGGCTTTTCTTTGTGAAGAAGAAGATCATGCCTTCGCGCCATGACAACACCATCACTTCAGACAAAGCATTGCTCCTTTACTGCATCTTGGAGGAGATACCTATCAATTTAGGCGAGATAATATGTCAACAAATCCACTCGTGGGTAAGGCACCCACGCAGCGCAAGACCATTTCCTCATTTAATCGAACAGTTGTGTTTGAAGGCATGCCCCGCGTTGAAGACTCTCCCCACAATATCCGTGAAGGATGGCCTTCGCTGA
Protein sequence
MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKHQLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHSWVRHPRSARPFPHLIEQLCLKACPALKTLPTISVKDGLR
Homology
BLAST of PI0004198 vs. ExPASy TrEMBL
Match:
A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 3.8e-42
Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
MV+ +VDF +NAF+ LE NE+G I KNP +D + LKR+AW G+K DI TR++
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
L HNLN + S+WL F KKKI+P+RHD I+ ++ +L+YCI+EEIP+N+GEII + I +
Sbjct: 75 HLFLHNLNIEVSIWLVFEKKKIIPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIA 134
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTLPTISVKDGL 159
WV+H ARPF +LIE+ LKAC AL LP + VKDG+
Sbjct: 135 WVKHLHGARPFSYLIEKFYLKACLALNQLPQVEVKDGV 172
BLAST of PI0004198 vs. ExPASy TrEMBL
Match:
A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
MV ++VDF +N + LE E+ I KNP +D +D LKR+AW +K DIMPT K+
Sbjct: 1 MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
QL NLNT+A +WL FVK I P+RHD+TI+ + +L+YCI+E + +N+ EII + I +
Sbjct: 61 QLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIA 120
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTL 150
WV+HPR RPF HLIE+LCLKACP + L
Sbjct: 121 WVKHPRRTRPFSHLIEKLCLKACPTSEQL 149
BLAST of PI0004198 vs. ExPASy TrEMBL
Match:
A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 9.1e-36
Identity = 68/129 (52.71%), Postives = 99/129 (76.74%), Query Frame = 0
Query: 31 KNPIAQDKKDVLKRIAWLGSKCDIMPTRKHQLLPHNLNTKASVWLFFVKKKIMPSRHDNT 90
+ P D ++ L+R+AW K D+ +K++L HNL T+ASVWL F+KKK+MP+RHDNT
Sbjct: 159 REPSDCDMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNT 218
Query: 91 ITSDKALLLYCILEEIPINLGEIICQQIHSWVRHPRSARPFPHLIEQLCLKACPALKTLP 150
I+ ++ +LLYCI+EEIP+++ EIIC I +WV+HPR A+PFPHLIE+LCL++C L+ P
Sbjct: 219 ISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSP 278
Query: 151 TIS-VKDGL 159
I+ V+DG+
Sbjct: 279 QIACVQDGM 287
BLAST of PI0004198 vs. ExPASy TrEMBL
Match:
A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 0
Query: 2 VRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKHQ 61
V+++RVDF K +NA Y L+ NE+G +I +NP A+D +D L+ I W G+K D MPT K+Q
Sbjct: 80 VKEKRVDFGPKAINALYGLKNNEIGHLIFENPKARDLQDALENIIWPGTKWDRMPTEKYQ 139
Query: 62 LLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHSW 121
L P++LNT+ SVWL F+KK IMP+RHD+TI+ + +LLY + N EI C+ + +W
Sbjct: 140 LFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIMLLYYNGDSNQFN--EISCEHLIAW 199
Query: 122 VRHPRSARPFPHLIEQLCLKACPALKTLPTISVKDGL 159
V+HP A+PF L +QL +KA P L+ + V +G+
Sbjct: 200 VKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNGV 234
BLAST of PI0004198 vs. ExPASy TrEMBL
Match:
A0A5D3D581 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00470 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 4.4e-30
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
M ++++VDF +N FYEL++NE+G I KNP QD +DVLKR
Sbjct: 54 MAKEKKVDFGPNAINEFYELDDNEIGHAIFKNPTKQDLEDVLKRRL-------------- 113
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
FVKKKIMP+RH++TI+ DK +L+YCI+EEIP N+ EIIC+ I +
Sbjct: 114 --------------AGFVKKKIMPTRHNSTISMDKIILIYCIMEEIPRNVSEIICEHIIA 173
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTLP 151
V+HP ARPFPHLIE+L LKAC AL+ +P
Sbjct: 174 CVKHPHDARPFPHLIEELSLKACMALEKIP 175
BLAST of PI0004198 vs. NCBI nr
Match:
KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 181.0 bits (458), Expect = 7.9e-42
Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
MV+ +VDF +NAF+ LE NE+G I KNP +D + LKR+AW G+K DI TR++
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
L HNLN + S+WL F KKKI+P+RHD I+ ++ +L+YCI+EEIP+N+GEII + I +
Sbjct: 75 HLFLHNLNIEVSIWLVFEKKKIIPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIA 134
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTLPTISVKDGL 159
WV+H ARPF +LIE+ LKAC AL LP + VKDG+
Sbjct: 135 WVKHLHGARPFSYLIEKFYLKACLALNQLPQVEVKDGV 172
BLAST of PI0004198 vs. NCBI nr
Match:
KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 166.0 bits (419), Expect = 2.6e-37
Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
MV ++VDF +N + LE E+ I KNP +D +D LKR+AW +K DIMPT K+
Sbjct: 1 MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
QL NLNT+A +WL FVK I P+RHD+TI+ + +L+YCI+E + +N+ EII + I +
Sbjct: 61 QLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIA 120
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTL 150
WV+HPR RPF HLIE+LCLKACP + L
Sbjct: 121 WVKHPRRTRPFSHLIEKLCLKACPTSEQL 149
BLAST of PI0004198 vs. NCBI nr
Match:
KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 159.8 bits (403), Expect = 1.9e-35
Identity = 68/129 (52.71%), Postives = 99/129 (76.74%), Query Frame = 0
Query: 31 KNPIAQDKKDVLKRIAWLGSKCDIMPTRKHQLLPHNLNTKASVWLFFVKKKIMPSRHDNT 90
+ P D ++ L+R+AW K D+ +K++L HNL T+ASVWL F+KKK+MP+RHDNT
Sbjct: 159 REPSDCDMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNT 218
Query: 91 ITSDKALLLYCILEEIPINLGEIICQQIHSWVRHPRSARPFPHLIEQLCLKACPALKTLP 150
I+ ++ +LLYCI+EEIP+++ EIIC I +WV+HPR A+PFPHLIE+LCL++C L+ P
Sbjct: 219 ISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSP 278
Query: 151 TIS-VKDGL 159
I+ V+DG+
Sbjct: 279 QIACVQDGM 287
BLAST of PI0004198 vs. NCBI nr
Match:
KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 152.5 bits (384), Expect = 3.0e-33
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 0
Query: 2 VRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKHQ 61
V+++RVDF K +NA Y L+ NE+G +I +NP A+D +D L+ I W G+K D MPT K+Q
Sbjct: 80 VKEKRVDFGPKAINALYGLKNNEIGHLIFENPKARDLQDALENIIWPGTKWDRMPTEKYQ 139
Query: 62 LLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHSW 121
L P++LNT+ SVWL F+KK IMP+RHD+TI+ + +LLY + N EI C+ + +W
Sbjct: 140 LFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIMLLYYNGDSNQFN--EISCEHLIAW 199
Query: 122 VRHPRSARPFPHLIEQLCLKACPALKTLPTISVKDGL 159
V+HP A+PF L +QL +KA P L+ + V +G+
Sbjct: 200 VKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNGV 234
BLAST of PI0004198 vs. NCBI nr
Match:
TYK18699.1 (hypothetical protein E5676_scaffold481G00470 [Cucumis melo var. makuwa])
HSP 1 Score: 141.0 bits (354), Expect = 9.1e-30
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0
Query: 1 MVRQRRVDFESKKVNAFYELEENEVGQVILKNPIAQDKKDVLKRIAWLGSKCDIMPTRKH 60
M ++++VDF +N FYEL++NE+G I KNP QD +DVLKR
Sbjct: 54 MAKEKKVDFGPNAINEFYELDDNEIGHAIFKNPTKQDLEDVLKRRL-------------- 113
Query: 61 QLLPHNLNTKASVWLFFVKKKIMPSRHDNTITSDKALLLYCILEEIPINLGEIICQQIHS 120
FVKKKIMP+RH++TI+ DK +L+YCI+EEIP N+ EIIC+ I +
Sbjct: 114 --------------AGFVKKKIMPTRHNSTISMDKIILIYCIMEEIPRNVSEIICEHIIA 173
Query: 121 WVRHPRSARPFPHLIEQLCLKACPALKTLP 151
V+HP ARPFPHLIE+L LKAC AL+ +P
Sbjct: 174 CVKHPHDARPFPHLIEELSLKACMALEKIP 175
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D2B5 | 3.8e-42 | 52.53 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3D7L3 | 1.3e-37 | 51.01 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DVQ6 | 9.1e-36 | 52.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CW17 | 1.5e-33 | 46.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3D581 | 4.4e-30 | 47.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041933.1 | 7.9e-42 | 52.53 | hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK1786... | [more] |
| KAA0057652.1 | 2.6e-37 | 51.01 | hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19... | [more] |
| KAA0054837.1 | 1.9e-35 | 52.71 | hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777... | [more] |
| KAA0041264.1 | 3.0e-33 | 46.50 | hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK160... | [more] |
| TYK18699.1 | 9.1e-30 | 47.33 | hypothetical protein E5676_scaffold481G00470 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
