PI0004195 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAACGAAAAATGAAAAATGAAAAAAAGAAAAAGAAAAAGAAAAAAAAGTGGAATAAGACTTAAATTGGATGATCCATCGATGATAAAAGCAACAAACAGAACTGCCATTAACTCTCTTTCACACATCAAAATACTTCCTAATTCACTTCCACAAAACTCTCCCTCCAACCTCAAAAATGGCGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGTACGGTAATTCCTCTTTCTTCTTCTTCTTCTCCTTGTACTTTCCCCCAATTTCAACTTCCACTGACCTAAAACAACCCAAGAAACTTCTCTTCCTCTGCGATCTAATCTCAATCTGACGACGTTGATCTGAATTAGGTTTTTGTTATAATTCGCAGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACGTTCCGGGGATCATTTACGCAGTCTACGCCATTGTGTTCGTGGATCGTGACCATTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGTCGGCGTCGGCGGATTAGCACAAGTTTGAATTTCTTGATCTATGTGTTTTAACTTATGGAATAAGTTGTTGGTTCTTATGTAGTTTTTTTTTGGATATTGGATTGGCTTTCATCTTCTTCGATTTGTAAGGCTCTCTCTTTCTTGCTTGGATTGGATTTTGTTGGAGGTATGGTTACGAACCAAGGCCACATTTACTCCGGTGCAAACGTAACAAATTTAACATAATATGAAAAGTGGACCATCACGTCGAATTCTATAATCAAAATCTGCAATTTAATTAAGTAGTAAAAGATATTCAATCTAAT AAACAACGAAAAATGAAAAATGAAAAAAAGAAAAAGAAAAAGAAAAAAAAGTGGAATAAGACTTAAATTGGATGATCCATCGATGATAAAAGCAACAAACAGAACTGCCATTAACTCTCTTTCACACATCAAAATACTTCCTAATTCACTTCCACAAAACTCTCCCTCCAACCTCAAAAATGGCGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGTACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACGTTCCGGGGATCATTTACGCAGTCTACGCCATTGTGTTCGTGGATCGTGACCATTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGTCGGCGTCGGCGGATTAGCACAAGTTTGAATTTCTTGATCTATGTGTTTTAACTTATGGAATAAGTTGTTGGTTCTTATGTAGTTTTTTTTTGGATATTGGATTGGCTTTCATCTTCTTCGATTTGTAAGGCTCTCTCTTTCTTGCTTGGATTGGATTTTGTTGGAGGTATGGTTACGAACCAAGGCCACATTTACTCCGGTGCAAACGTAACAAATTTAACATAATATGAAAAGTGGACCATCACGTCGAATTCTATAATCAAAATCTGCAATTTAATTAAGTAGTAAAAGATATTCAATCTAAT ATGGCGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGTACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACGTTCCGGGGATCATTTACGCAGTCTACGCCATTGTGTTCGTGGATCGTGACCATTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGTCGGCGTCGGCGGATTAG MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIVFVDRDHFFDEYRRPLYSSASAD Homology
BLAST of PI0004195 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-26 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.0e-25 Identity = 52/74 (70.27%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.2e-19 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-16 Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy TrEMBL
Match: A0A5A7UJR3 (UPF0057 membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00760 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34 Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy TrEMBL
Match: A0A1S3BTY7 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34 Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy TrEMBL
Match: A0A0A0LGN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy TrEMBL
Match: A0A6J1KI35 (UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494032 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 7.9e-33 Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of PI0004195 vs. ExPASy TrEMBL
Match: A0A6J1G463 (UPF0057 membrane protein At2g24040-like OS=Cucurbita moschata OX=3662 GN=LOC111450578 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 7.9e-33 Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of PI0004195 vs. NCBI nr
Match: XP_008452728.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo] >KAA0056112.1 UPF0057 membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 3.0e-34 Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of PI0004195 vs. NCBI nr
Match: XP_011648896.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical protein Csa_021360 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of PI0004195 vs. NCBI nr
Match: XP_038890692.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida]) HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of PI0004195 vs. NCBI nr
Match: XP_022946545.1 (UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF0057 membrane protein At2g24040-like [Cucurbita maxima] >XP_023523032.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >XP_023546587.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >KAG6599143.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030086.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32 Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of PI0004195 vs. NCBI nr
Match: XP_022158160.1 (UPF0057 membrane protein At2g24040-like [Momordica charantia]) HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32 Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0
BLAST of PI0004195 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family ) HSP 1 Score: 134.0 bits (336), Expect = 5.1e-32 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of PI0004195 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 1.7e-27 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of PI0004195 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26 Identity = 52/74 (70.27%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of PI0004195 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26 Identity = 52/74 (70.27%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of PI0004195 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family ) HSP 1 Score: 94.0 bits (232), Expect = 5.8e-20 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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