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PI0004144 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATCCTAACTTAGGAACACAAATAATGTCACCCCATGTTCTTTAATTCCCACTTTCTGAAAAATTTCAATTAAAAGTGTTTCTTCTTTTTTCCTTTGAATAGTCTCTTTCAAACTTTCAATTCTCCATTTACTCTAAACCAAATTTAGTCCCCACCCCTCTTTTTTCTTAATTACTCTAATCCCAACAAATCCATATATAAATACATATCCTTTGTTGTAAAAAATATGACAACATTATTTCATTTTGACATAATGAATGAAGAGCAAGAATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAAGCCAGGCTTAGAGATCCTGTTTATGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAATACTTCCTCTTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGACTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGAAACTTTGTGATCTCTCTCTCTCTGTCTCTATCATCAAGGTTTCCTGAAAGATTTTTCTTTTCTTTTTATGTATAGTCAATCATCTGTTTATTCCCATCTCAATTCTTGTTTTTTTTCTGTTTAATTCTTTAAGTAT CTCATCCTAACTTAGGAACACAAATAATGTCACCCCATGTTCTTTAATTCCCACTTTCTGAAAAATTTCAATTAAAAGTGTTTCTTCTTTTTTCCTTTGAATAGTCTCTTTCAAACTTTCAATTCTCCATTTACTCTAAACCAAATTTAGTCCCCACCCCTCTTTTTTCTTAATTACTCTAATCCCAACAAATCCATATATAAATACATATCCTTTGTTGTAAAAAATATGACAACATTATTTCATTTTGACATAATGAATGAAGAGCAAGAATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAAGCCAGGCTTAGAGATCCTGTTTATGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAATACTTCCTCTTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGACTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGAAACTTTGTGATCTCTCTCTCTCTGTCTCTATCATCAAGGTTTCCTGAAAGATTTTTCTTTTCTTTTTATGTATAGTCAATCATCTGTTTATTCCCATCTCAATTCTTGTTTTTTTTCTGTTTAATTCTTTAAGTAT ATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAAGCCAGGCTTAGAGATCCTGTTTATGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAATACTTCCTCTTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGACTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGA MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANNNTSSSSSSSSSCVENCVVNMSYGGLSFSAEQTDDITQYGYLCDFTHFPYPFKA Homology
BLAST of PI0004144 vs. ExPASy Swiss-Prot
Match: Q9SRL8 (LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.8e-45 Identity = 96/129 (74.42%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 8.0e-35 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3) HSP 1 Score: 145.6 bits (366), Expect = 5.2e-34 Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.0e-33 Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy TrEMBL
Match: A0A1S3B334 (LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE=3 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86 Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy TrEMBL
Match: A0A5A7UN14 (LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001800 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.1e-86 Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy TrEMBL
Match: A0A6J1JJ75 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111487426 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy TrEMBL
Match: A0A6J1GN41 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111456020 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78 Identity = 149/171 (87.13%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of PI0004144 vs. ExPASy TrEMBL
Match: A0A6J1JS05 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111489259 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76 Identity = 157/182 (86.26%), Postives = 161/182 (88.46%), Query Frame = 0
BLAST of PI0004144 vs. NCBI nr
Match: XP_004138415.1 (LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical protein Csa_005704 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 3.9e-87 Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of PI0004144 vs. NCBI nr
Match: XP_008441477.1 (PREDICTED: LOB domain-containing protein 21-like [Cucumis melo]) HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86 Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of PI0004144 vs. NCBI nr
Match: KAA0055025.1 (LOB domain-containing protein 21-like [Cucumis melo var. makuwa]) HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85 Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of PI0004144 vs. NCBI nr
Match: XP_038885630.1 (LOB domain-containing protein 21 [Benincasa hispida]) HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80 Identity = 158/174 (90.80%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of PI0004144 vs. NCBI nr
Match: XP_022990592.1 (LOB domain-containing protein 21-like [Cucurbita maxima]) HSP 1 Score: 307.4 bits (786), Expect = 7.9e-80 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of PI0004144 vs. TAIR 10
Match: AT3G11090.1 (LOB domain-containing protein 21 ) HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46 Identity = 96/129 (74.42%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of PI0004144 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of PI0004144 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of PI0004144 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of PI0004144 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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