PI0004061 (gene) Melon (PI 482460) v1

Overview
NamePI0004061
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 22569627 .. 22572333 (+)
RNA-Seq ExpressionPI0004061
SyntenyPI0004061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCCACGGACGAATGTCTATTTGTAGAGGTATTTATTTACACACTTCAACATATTTTAGAGAAGTCTAATTTTTACATTTTTGCTTCTAAAATAGTTAGCATGGTCTTCTAGTTTAACATTAAATACCAAATGAAGGCAACAATGCTCTCTGGTGCCGAGCTTTTAAGTTCATTTGAAGGCATTGAAGATCTCTCATGATTGGATAGATAACACGATTAACTTCGTGATCCTAATTCAAATGCTTAAGTTGTTCCTCAATTTCCAGGCAGCAATAAGAGGATGAAGGGCCGAACTTGAATCCCTAATCTGTTTGCCTGATCTGTGTAAACTGCATCATGGAGCTCTCAGTGAAACTTTGCCCTCTTCACTATTTTAGCTACACTGGGAAATGATGGTTAGGGAGATGTCCTCTCAATATGAAACTTTTATGTTTTCTAGTTTAAGTTTTTCCTATATAAATTAATTTGTCACGATGAATAGTAGGTTGGTGCTCTATTATAAGATCAAAGAATTAAATATTGTTGCTTGGCACTTGATATATTTTTATTTCTGTGCTATTAATGATATCATACTTCACCAGTGTTCAAGGAACTATGAAAATTATTTACCACCCAATATTTATAATTGTCCTTGTCCTAGAGTTCTGGCATGCAGTAAGGAATAAGCTGTAATCTCAGGTAAGGTCAGAAAATAACTTATAAGCTTTTTTACTATACCGTCAGTTACTTCTATGTGTATAGGGAGAAGAAGAACATGGTAATGGGTTTTGAATTCAAGAGGCATATAATCGCTATTGATTTTATGTGCACGAATGGCGTAATAAATTGATTAGTGAAAAGAACATTTAAAGTCGTCTGAACTCTCTTTCCCTTGTACGCACAGTTATATGATATGATATTAAATTTTACTTCACCCATTAGTTTAAGCTTTTGTCCCTCCAATTAATATTGATTTTCATTTCTTAGATCTTTGTTAGGAACCAAGGTAGTATGGGATGCCTTTGTCCCCCATTGATTAAAACCTACCAGTCTTATTCATATTTCAACTCACAAGTGAGGGGAGTGTTAGATGATGTGATATTAAACTTGCCTTCACTCATTAAGTTTTTAGGTCAATCGGAGATTTAAGAGCCTTCTTAAAATTTTGATGGGCTAAATTATTGGTTTCGGAGCGCCAAATGTCTGAGTTGAATAGCTGATTTCTTGAACCATGTCATGAAGAAAGTTTTATCTCACGAATCATTCCTGGCTGATCAAATAATTATTGTTATATCGCTGTTTTAGTGCACTTTTCAAGTGTCGCAATTAATATTTAAAAGTGTTACCGTTCTTCCATGGAGTTATCAATGTGATCAACTACTGCTCGTGCCTAATTTATGAATGAACATCTCTTTGCAGTGTAGAAATAAAAAGTTAAATCAGTTGATGTTGGAAGAATTTATTGGAGCTAAGCATCAAGGTGAGCTACCTGCATTTTCTTCTTTTATCTTCTTGAGCCTGCAAGTTGGTGATCCTTGCATCATCGCATGCCTTTCTTTTTAACATCACAAAAAGTTTAACAAACCCAAGCCAGTTGCATGTGCATAAGGTTTTCATGGACCTACAGAAAAGGTGTACGATTAGATTAGAACTATTTAGGTCTCAAGAAAATCAAGAGTAACTATGAATAAGATTACATGTATACTTTTGTGACCTTATAATTTGAGTACCCCCTAGGAATATTGTGATAGGAATGCTAATAATAATTAGAGTGTTAAGGGCATTTAGCAATTAGTTAAGGAGTTTGTTAGGAACTTTGGTTATAAATACAATGACTGGGGAAGAAGGAGGGTAAGCATTCTTTTGTAAACCCCTTGAACACTTGGTTTATTTTGTATTCGGGTTATCTTTTATAGTTCAATATATTCGAGTTCTATCATATTGCTTATTTGTATGGAATCTTGGGATTTAGAAGTATTCGCAAATGGATATGTATCCCCAAATCAGTCGACCACAAAATTGCAGTAATTGGATGGGGAAAGGTTAGTGGTCCCTTCAGTCAATTTTTGGTTCACATGCAAATGTATTCCTCTGTCTTACTCTTTGAGATTTGTGACATTAAAGGTGTGGTTTCTCTTTGTCAAAGAAATTTATTTCAATACTTGTGTATTTCCCCTGATGTGTTTGAGTGTTGCTTCCCGTGCTTCACCGTCTCAAATAAGTCCCAGTGGGGACTTAGTTCCAAAAGTAGTTAACAAATTGTAGTTATACTACAACAAGTTAAGCTCCAAATGCAACTTTTCTAAAGAAATTTATTTCCCTGTAAATTTAGCTGTCCTATCCTGCACTATTTGGGTCAAACCCCAGAAATCTGTTCTGCATTTAATAAGGAAAAGAAATTGGACTATGGTTGGTGCAATCAAGGCGATTAGGATAGTTAGGTAGCACCTTTTTATTAATTTTCCGGTACTAAATTGTGAAAACATTTCCTCCTTTTATTGGTATATAGTAGCAACCTGTGTCTCGAGGTTCTACTTATTAATCATATTTCTAGCACCATACTACTACTTTGGATTACTGCAACATTAATCTGATGTAATCTAGTTATCATATTGACATGAATATCTATGGCTTGTTATGACTTGTTTATATCCAGATACCTAAGAAGAACCTGGTTTACATCCCAATATATAGTTGTGGGTGTGAAACCGACCATTTGA

mRNA sequence

ATGGCTTCTTCCACGGACGAATGTCTATTTGTAGAGTGTAGAAATAAAAAGTTAAATCAGTTGATGTTGGAAGAATTTATTGGAGCTAAGCATCAAGGTGAATACCTAAGAAGAACCTGGTTTACATCCCAATATATAGTTGTGGGTGTGAAACCGACCATTTGA

Coding sequence (CDS)

ATGGCTTCTTCCACGGACGAATGTCTATTTGTAGAGTGTAGAAATAAAAAGTTAAATCAGTTGATGTTGGAAGAATTTATTGGAGCTAAGCATCAAGGTGAATACCTAAGAAGAACCTGGTTTACATCCCAATATATAGTTGTGGGTGTGAAACCGACCATTTGA

Protein sequence

MASSTDECLFVECRNKKLNQLMLEEFIGAKHQGEYLRRTWFTSQYIVVGVKPTI
Homology
[Close]
BLAST of PI0004061 vs. ExPASy TrEMBL
Match: A0A0A0LA07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732660 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-12
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 12  ECRNKKLNQLMLEEFIGAKHQGEYLRRTWFTSQYIVVGVKPTI 55
           +CR KK NQLML EFIGAKHQ  YLRRTWFTSQYIVVGVKPTI
Sbjct: 124 QCRKKKFNQLMLGEFIGAKHQDRYLRRTWFTSQYIVVGVKPTI 166

[Close]
BLAST of PI0004061 vs. NCBI nr
Match: KAE8650991.1 (hypothetical protein Csa_001615 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-12
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 12  ECRNKKLNQLMLEEFIGAKHQGEYLRRTWFTSQYIVVGVKPTI 55
           +CR KK NQLML EFIGAKHQ  YLRRTWFTSQYIVVGVKPTI
Sbjct: 171 QCRKKKFNQLMLGEFIGAKHQDRYLRRTWFTSQYIVVGVKPTI 213

The following BLAST results are available for this feature:
BLAST of PI0004061 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA071.4e-1286.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732660 PE=4 SV=1[more]
BLAST of PI0004061 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650991.12.9e-1286.05hypothetical protein Csa_001615 [Cucumis sativus][more]
BLAST of PI0004061 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004061.1PI0004061.1mRNA