PI0003979 (gene) Melon (PI 482460) v1

Overview
NamePI0003979
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 21030855 .. 21031941 (+)
RNA-Seq ExpressionPI0003979
SyntenyPI0003979
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGTAAGGTGACTCACGGATATAAAACAAGTAATAAAAATTTAGGGGTGATGTGACTCCACTGACAAGAGAACTACGTCTATGTTCTCTGTTTAATTTCTTTCTTGGATGATATTATGGTTTTAAGCCACTGATTTCTTCTCTATTGTTGTCATTATCTTTTAGATAATCTTGAAACCTTCTTTGTTCTAAACACGGCTTTGAAACTGAGAGCTTTCACACCTATTATTCTTGCTCGTTTCTTTGTTGATGTTTCTATTTGTTATTGGTAGATTAGCAGCGCTATGGAGATTGGTTGGGGGGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTATTTGGTTTTGAGAGAGAACTTGTCCTTTTGACCCTTTTGAGTTCAAAGAAAACCTCGAATGCCTAAACGATTCTTGCTTAAATTATCCTTGTGCTTTCTGACCATCTGAGTTTCCCTATATTCTTTGACTATCTCTAGATGTAATTCAATCGCTTTGATTTTGTTCCAATTTGATGAAAGGCTTAGTTTTTATGTTTTTTTCCCCTTCTGTATGAATGAACTAAGGATTGAAATGTTGAGGTCTCATTTAGAAATGTTAATTCAAACAAAAACTAAATTTGTTAAATAGAAAAGTAGTTTGGTGCGTTTAGGTTGCCTCATTTTTGCATAGTGTTTAATCACGAGTTGTGGTCCTTGTAGGTAGAAACTTTTCTTTTTTAAAATTAAAAGATTTGGTAATATGTTTTTTCCTTTATAATTGAAAGGACATGAAGATGGGTGTCATTCAACTACTCTCTAATTATGACTTTCGTTATTGTTTGAACATGTAGATTTACTGAAGTCACCTCAAGTTTGATGTCGATAGTGCAAATTCATTCATGGCAGTTGATGGCATGTGAATAAGTAGGTAAATAAGTAGGTAAATAATTTGTTTGTGATTGCAATGCATGTGATTTAGGTACAGGATCATGCAATCGGAAATTGTGATGATTGATATCTGGATCGTGTTGCTGGATGCCACCACATTCTGGGTAAGCGATGATATCACACCACTATGA

mRNA sequence

ATGCACGTAAGATTAGCAGCGCTATGGAGATTGGTTGGGGGGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTACAGGATCATGCAATCGGAAATTGTGATGATTGATATCTGGATCGTGTTGCTGGATGCCACCACATTCTGGGTAAGCGATGATATCACACCACTATGA

Coding sequence (CDS)

ATGCACGTAAGATTAGCAGCGCTATGGAGATTGGTTGGGGGGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTACAGGATCATGCAATCGGAAATTGTGATGATTGATATCTGGATCGTGTTGCTGGATGCCACCACATTCTGGGTAAGCGATGATATCACACCACTATGA

Protein sequence

MHVRLAALWRLVGGNGGQLLEVEMTKLVKTSLERYRIMQSEIVMIDIWIVLLDATTFWVSDDITPL
Homology
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BLAST of PI0003979 vs. ExPASy TrEMBL
Match: A0A0A0KRE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613610 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-04
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 15 NGGQLLEVEMTKLVKTSLERYRIMQSEIVMIDIWIVLLDAT 56
          NGGQL+EVEMTKL       YRIMQSE+V IDIWIVLL+ T
Sbjct: 7  NGGQLVEVEMTKL-------YRIMQSEVVTIDIWIVLLEVT 40

The following BLAST results are available for this feature:
BLAST of PI0003979 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003979 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRE75.0e-0470.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613610 PE=4 SV=1[more]
BLAST of PI0003979 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0003979 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003979.1PI0003979.1mRNA