PI0003956 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGTAGTTCCTTCCAATCATCTTTTAAAAGTCCCAACACAAAAAGCTTCAACTTTTATTGCATCAATGGCATCCCAACAATGCACCAAGCCAGCTGCTTATGAGCATGGTCAGCACCAGCAGAAGCATGACCAACAACACGATCACCATTGCTTCGGCGGCCATGTCTCCGACAAAATCAAGGGCGTCTTCAAAGGCCACCATCACGACCAGGCTCCACCGGCATCGGGCGTGGTATACCACTCTGCCAATGACAGCCACTGCAAGGCAAGTGGGTCAAAGAAGAAGAAGGAACACCAAAAGAATAAGGAAGGAGGTTTGTTGCATAAGATCAAGGAAGCCTTTTCTGACCATAGCAGTGATAGTAGTGACAGTGACAATGAATGTCACAAACCCCATCACAATAAAAAGGTAAGTTTGATTTTGTTCGTTCTAATTTCTCTGATTTATAATTTCATTTCGGATTTAACTACTATTGTGAAATAAAATTTACCAAGTGTTAGATTATTTAATTACTTGCCAAAACATGAGTTGTACATTTAGTTTTAGCATGTTAACAACAGTTCGTGATAGCAGTAACTGTTGATTTTAATATATAGTGATAGTAGCTGTTCAACGACCATGTTTTAATAGGATCTGGTGCATTGTCATTGGTATCTTTTCGTAATATTTTTGTTTTGATTTCTATTTCTCTTTTCTTTCGTTATGTAATTCTACATAACTTTGGCCTGGATTTGCAGAAATGAATGGAGAGAAGGAAGGTGAATCGATTGAAGGAAAAGTGTGGATGCCTCTAAACTAGCTACTGCTACTATGAATTTGGTGAAGCAAAAATAAAGATACGGTGTTGGATAAAGATGATAATTTATGAGACTTTACTGTACCTATTTCTTCTTTGAAATAAACTTCTGTATTCCTATCCTTGTTATCGATATAAAAAGTATGTTATAAACTAGATTCTACGGATCGTTGTTAGT CAAGTAGTTCCTTCCAATCATCTTTTAAAAGTCCCAACACAAAAAGCTTCAACTTTTATTGCATCAATGGCATCCCAACAATGCACCAAGCCAGCTGCTTATGAGCATGGTCAGCACCAGCAGAAGCATGACCAACAACACGATCACCATTGCTTCGGCGGCCATGTCTCCGACAAAATCAAGGGCGTCTTCAAAGGCCACCATCACGACCAGGCTCCACCGGCATCGGGCGTGGTATACCACTCTGCCAATGACAGCCACTGCAAGGCAAGTGGGTCAAAGAAGAAGAAGGAACACCAAAAGAATAAGGAAGGAGGTTTGTTGCATAAGATCAAGGAAGCCTTTTCTGACCATAGCAGTGATAGTAGTGACAGTGACAATGAATGTCACAAACCCCATCACAATAAAAAGAAATGAATGGAGAGAAGGAAGGTGAATCGATTGAAGGAAAAGTGTGGATGCCTCTAAACTAGCTACTGCTACTATGAATTTGGTGAAGCAAAAATAAAGATACGGTGTTGGATAAAGATGATAATTTATGAGACTTTACTGTACCTATTTCTTCTTTGAAATAAACTTCTGTATTCCTATCCTTGTTATCGATATAAAAAGTATGTTATAAACTAGATTCTACGGATCGTTGTTAGT ATGGCATCCCAACAATGCACCAAGCCAGCTGCTTATGAGCATGGTCAGCACCAGCAGAAGCATGACCAACAACACGATCACCATTGCTTCGGCGGCCATGTCTCCGACAAAATCAAGGGCGTCTTCAAAGGCCACCATCACGACCAGGCTCCACCGGCATCGGGCGTGGTATACCACTCTGCCAATGACAGCCACTGCAAGGCAAGTGGGTCAAAGAAGAAGAAGGAACACCAAAAGAATAAGGAAGGAGGTTTGTTGCATAAGATCAAGGAAGCCTTTTCTGACCATAGCAGTGATAGTAGTGACAGTGACAATGAATGTCACAAACCCCATCACAATAAAAAGAAATGA MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKPHHNKKK Homology
BLAST of PI0003956 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.3e-51 Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of PI0003956 vs. ExPASy TrEMBL
Match: A0A5A7TMV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001930 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 5.8e-32 Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of PI0003956 vs. ExPASy TrEMBL
Match: A0A6J1CWW2 (uncharacterized protein LOC111015315 OS=Momordica charantia OX=3673 GN=LOC111015315 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23 Identity = 77/118 (65.25%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of PI0003956 vs. ExPASy TrEMBL
Match: A0A6J1H399 (glycine-rich cell wall structural protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459722 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06 Identity = 48/100 (48.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of PI0003956 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50 Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of PI0003956 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 177.9 bits (450), Expect = 4.9e-41 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of PI0003956 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 146.7 bits (369), Expect = 1.2e-31 Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of PI0003956 vs. NCBI nr
Match: XP_022146004.1 (uncharacterized protein LOC111015315 [Momordica charantia]) HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23 Identity = 77/118 (65.25%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of PI0003956 vs. NCBI nr
Match: XP_022958513.1 (glycine-rich cell wall structural protein 1-like [Cucurbita moschata]) HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06 Identity = 48/100 (48.00%), Postives = 56/100 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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