PI0003901 (gene) Melon (PI 482460) v1

Overview


Name	PI0003901
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	multiprotein-bridging factor 1c
Location	chr05: 820015 .. 820666 (-)
RNA-Seq Expression	PI0003901
Synteny	PI0003901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACGTCATAATATTCGAACAGATGTCTCAAGAACGTTCGAGAAACAAAAAGGCTGTCCAAAGCGGGCAAGAACTTTCCAGAGAAGCAATCCCTCTTTCTCTCTATATATAATCCATCTCCCCAAACTTTCATGGCAATCAACGTTCAAACCTAATCACCCATTTCCAATTCTTTTCCTTTTTTCTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCAATCAGAACCGGCGCAGCGGTTCAGACAGTGAAGAAATTCGACGCCGGCTTGAACAAGAAAGTCGCAGCGGCGCCAGTGAACTCAAGGAAGCTGGACGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGAGTGGAGAAGAAGATGAGCCAAGCGGAACTGGCGAAACAGATTAACGAGCGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAGGCGGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTCAAGCTTCGAGGGAGATCGGGGAAATGA

mRNA sequence

ATGCCACGTCATAATATTCGAACAGATGTCTCAAGAACGTTCGAGAAACAAAAAGGCTGTCCAAAGCGGGCAAGAACTTTCCAGAGAAGCAATCCCTCTTTCTCTCTATATATAATCCATCTCCCCAAACTTTCATGGCAATCAACCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCAATCAGAACCGGCGCAGCGGTTCAGACAGTGAAGAAATTCGACGCCGGCTTGAACAAGAAAGTCGCAGCGGCGCCAGTGAACTCAAGGAAGCTGGACGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGAGTGGAGAAGAAGATGAGCCAAGCGGAACTGGCGAAACAGATTAACGAGCGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAGGCGGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTCAAGCTTCGAGGGAGATCGGGGAAATGA

Coding sequence (CDS)

ATGCCACGTCATAATATTCGAACAGATGTCTCAAGAACGTTCGAGAAACAAAAAGGCTGTCCAAAGCGGGCAAGAACTTTCCAGAGAAGCAATCCCTCTTTCTCTCTATATATAATCCATCTCCCCAAACTTTCATGGCAATCAACCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCAATCAGAACCGGCGCAGCGGTTCAGACAGTGAAGAAATTCGACGCCGGCTTGAACAAGAAAGTCGCAGCGGCGCCAGTGAACTCAAGGAAGCTGGACGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGAGTGGAGAAGAAGATGAGCCAAGCGGAACTGGCGAAACAGATTAACGAGCGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAGGCGGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTCAAGCTTCGAGGGAGATCGGGGAAATGA

Protein sequence

MPRHNIRTDVSRTFEKQKGCPKRARTFQRSNPSFSLYIIHLPKLSWQSTRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAPVNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

Homology

[Close]

BLAST of PI0003901 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-53
Identity = 112/146 (76.71%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKK---VA 108
           +R+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R G AVQTVKKFDAG NKK    A
Sbjct: 3   SRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTA 62

Query: 109 AAPVNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 168
              +N++KL+E TEPAA+DRV  EVR  IQKAR+EKKMSQA+LAKQINERTQVVQEYENG
Sbjct: 63  VPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENG 122

Query: 169 KAVPNQAVLAKMEKVLGVKLRGRSGK 192
           KAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 123 KAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of PI0003901 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.4e-33
Identity = 73/137 (53.28%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 53  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAA-APVNS 112
           G ++QDWEPVV+ K  P A A RD K VN A R+GA ++TV+KF+AG NK  ++   +N+
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 113 RKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 172
           +KLD+ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 173 AVLAKMEKVLGVKLRGR 189
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of PI0003901 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.8e-31
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 53  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAA-APVNS 112
           G ++QDWEPVV+ K    A A RD K VN A R+GA ++TV+KF+AG NK  ++   +N+
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 113 RKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 172
           + LD+ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 173 AVLAKMEKVLGVKLRGR 189
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of PI0003901 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-19
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 58  DWEPV-VLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAPVNSRKLDE 117
           DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+      N+ KLD 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 118 GTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAK 177
            TE    DRV +EV + IQ+ R  K M+Q +LA +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 178 MEKVLGVKLRGR 189
           +E+V+G+KLRG+
Sbjct: 125 IERVIGLKLRGK 135

[Close]

BLAST of PI0003901 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-19
Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 58  DWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAPVNSRKLDEG 117
           DW+ V + + K  A   +  +AV  A R G AV+T KK+ AG NK+      N+ KLD  
Sbjct: 5   DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNKQHVVTK-NTAKLDRE 64

Query: 118 TEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKM 177
           TE  +  RV +EV + IQ+ R  K ++Q +LA +INE+ Q++ EYE GKA+PN  V+ K+
Sbjct: 65  TEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGKI 124

Query: 178 EKVLGVKLRGR 189
           E+ +G+KLRG+
Sbjct: 125 ERAIGLKLRGK 134

[Close]

BLAST of PI0003901 vs. ExPASy TrEMBL
Match: A0A1S3C8T1 (multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.5e-72
Identity = 163/214 (76.17%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MPRHNIRTDVSRTFEKQ--KGCPKRARTF-QRSNPS--------------------FSLY 60
           MPRH+IRTDVSRTFEKQ  K  P++   F    NPS                    FSL 
Sbjct: 1   MPRHHIRTDVSRTFEKQAGKNFPEKQSLFLSIYNPSPRSSIAINVETKSSISNCLDFSLS 60

Query: 61  IIHLPKLSWQSTRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFD 120
           I+     +   +RFPGALSQDWEPVVLHKAKPKAQ LRDPKAVNQAIR+GA VQTVKKFD
Sbjct: 61  ILKFS--TTMPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFD 120

Query: 121 AGLNKKVAAAPVNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQ 180
           AGLNKKVAAAPVN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQ
Sbjct: 121 AGLNKKVAAAPVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQ 180

Query: 181 VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK 192
           VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 181 VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of PI0003901 vs. ExPASy TrEMBL
Match: A0A5D3CHG2 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00210 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.7e-65
Identity = 138/143 (96.50%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIR+GA VQTVKKFDAGLNKKVAAAP
Sbjct: 3   SRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of PI0003901 vs. ExPASy TrEMBL
Match: A0A5A7V2S1 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001220 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.0e-65
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQ LRDPKAVNQAIR+GA VQTVKKFDAGLNKKVAAAP
Sbjct: 70  SRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAP 129

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 130 VNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 189

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 190 PNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of PI0003901 vs. ExPASy TrEMBL
Match: A0A0A0LFV9 (HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64
Identity = 136/143 (95.10%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIR+GA VQTVKKFDAGLNKKV AAP
Sbjct: 3   SRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKL+EGTEPAALDRVAVEVRQAIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of PI0003901 vs. ExPASy TrEMBL
Match: A0A6J1HN61 (multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59
Identity = 126/143 (88.11%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGA+SQDWEPVVLHK+KPKAQ LRDPKAVNQAIR+GA V TVKKFDAG NKK  AAP
Sbjct: 3   SRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKL+EGTEPAALDRV  EVR AIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of PI0003901 vs. NCBI nr
Match: XP_008458302.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-71
Identity = 163/214 (76.17%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MPRHNIRTDVSRTFEKQ--KGCPKRARTF-QRSNPS--------------------FSLY 60
           MPRH+IRTDVSRTFEKQ  K  P++   F    NPS                    FSL 
Sbjct: 1   MPRHHIRTDVSRTFEKQAGKNFPEKQSLFLSIYNPSPRSSIAINVETKSSISNCLDFSLS 60

Query: 61  IIHLPKLSWQSTRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFD 120
           I+     +   +RFPGALSQDWEPVVLHKAKPKAQ LRDPKAVNQAIR+GA VQTVKKFD
Sbjct: 61  ILKFS--TTMPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFD 120

Query: 121 AGLNKKVAAAPVNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQ 180
           AGLNKKVAAAPVN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQ
Sbjct: 121 AGLNKKVAAAPVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQ 180

Query: 181 VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK 192
           VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 181 VVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of PI0003901 vs. NCBI nr
Match: TYK10712.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 258.8 bits (660), Expect = 3.6e-65
Identity = 138/143 (96.50%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIR+GA VQTVKKFDAGLNKKVAAAP
Sbjct: 3   SRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of PI0003901 vs. NCBI nr
Match: KAA0061560.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 1.0e-64
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQ LRDPKAVNQAIR+GA VQTVKKFDAGLNKKVAAAP
Sbjct: 70  SRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAP 129

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKLDEGTEPAALDRV VEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 130 VNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 189

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 190 PNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of PI0003901 vs. NCBI nr
Match: XP_004139340.1 (multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical protein Csa_019517 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 136/143 (95.10%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIR+GA VQTVKKFDAGLNKKV AAP
Sbjct: 3   SRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKL+EGTEPAALDRVAVEVRQAIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of PI0003901 vs. NCBI nr
Match: XP_038890461.1 (multiprotein-bridging factor 1c [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 132/143 (92.31%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAAAP 108
           +RFPGA++QDWEPVVLHKAKPKAQALRDPKAVNQAIR+GAAVQTVKKFDAG NKK AAAP
Sbjct: 3   SRFPGAIAQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAP 62

Query: 109 VNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAV 168
           VN+RKLDE TEPAALDRVA EVR AIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAV
Sbjct: 63  VNARKLDELTEPAALDRVAAEVRLAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAV 122

Query: 169 PNQAVLAKMEKVLGVKLRGRSGK 192
           PNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 123 PNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of PI0003901 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-54
Identity = 112/146 (76.71%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKK---VA 108
           +R+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R G AVQTVKKFDAG NKK    A
Sbjct: 3   SRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTA 62

Query: 109 AAPVNSRKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 168
              +N++KL+E TEPAA+DRV  EVR  IQKAR+EKKMSQA+LAKQINERTQVVQEYENG
Sbjct: 63  VPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENG 122

Query: 169 KAVPNQAVLAKMEKVLGVKLRGRSGK 192
           KAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 123 KAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of PI0003901 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-34
Identity = 73/137 (53.28%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 53  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAA-APVNS 112
           G ++QDWEPVV+ K  P A A RD K VN A R+GA ++TV+KF+AG NK  ++   +N+
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 113 RKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 172
           +KLD+ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 173 AVLAKMEKVLGVKLRGR 189
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of PI0003901 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-32
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 53  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKKVAA-APVNS 112
           G ++QDWEPVV+ K    A A RD K VN A R+GA ++TV+KF+AG NK  ++   +N+
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 113 RKLDEGTEPAALDRVAVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 172
           + LD+ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 173 AVLAKMEKVLGVKLRGR 189
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of PI0003901 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 114.8 bits (286), Expect = 7.8e-26
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 49  TRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRTGAAVQTVKKFDAGLNKK---VA 108
           +R+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R G AVQTVKKFDAG NKK    A
Sbjct: 3   SRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTA 62

Query: 109 AAPVNSRKLDEGTEPAALDRVAVEVRQAIQKAR 139
              +N++KL+E TEPAA+DRV  EVR  +++ R
Sbjct: 63  VPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of PI0003901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV58	4.3e-53	76.71	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q9LXT3	8.4e-33	53.28	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	7.8e-31	50.36	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6GPQ6	1.8e-19	45.45	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q6PBY3	4.0e-19	42.75	Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e...	[more]

BLAST of PI0003901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8T1	9.5e-72	76.17	multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=...	[more]
A0A5D3CHG2	1.7e-65	96.50	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V2S1	5.0e-65	95.80	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LFV9	1.1e-64	95.10	HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]
A0A6J1HN61	1.9e-59	88.11	multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4...	[more]

BLAST of PI0003901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458302.1	2.0e-71	76.17	PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]	[more]
TYK10712.1	3.6e-65	96.50	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
KAA0061560.1	1.0e-64	95.80	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
XP_004139340.1	2.3e-64	95.10	multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical prote...	[more]
XP_038890461.1	1.1e-61	92.31	multiprotein-bridging factor 1c [Benincasa hispida]	[more]

BLAST of PI0003901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24500.1	3.0e-54	76.71	multiprotein bridging factor 1C	[more]
AT3G58680.1	5.9e-34	53.28	multiprotein bridging factor 1B	[more]
AT2G42680.1	5.6e-32	50.36	multiprotein bridging factor 1A	[more]
AT3G24500.2	7.8e-26	63.44	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..154
None	No IPR available	PANTHER	PTHR10245:SF71	MULTIPROTEIN-BRIDGING FACTOR 1C	coord: 49..190
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 49..190
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 133..188 e-value: 2.2E-13 score: 60.5
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 134..185 e-value: 2.4E-13 score: 49.9
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 134..188 score: 13.874313
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 132..185 e-value: 1.80918E-11 score: 55.2518
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 57..126 e-value: 7.0E-19 score: 68.0
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 117..191 e-value: 1.3E-28 score: 100.2
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 129..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003901.1	PI0003901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009408	response to heat
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity