PI0003900 (gene) Melon (PI 482460) v1

Overview


Name	PI0003900
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ulp1-like peptidase
Location	chr03: 10294691 .. 10295630 (+)
RNA-Seq Expression	PI0003900
Synteny	PI0003900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATGTCTTCATGCATGTTTCCGTTTTGGAGATCGATGACCAACATGTTGATGATGAGGCAGAAACATCTATAAGTGAAAACATAGGAGATGGATGCCTACCGATCAATATATCTTCAGGGGGTGAGGATGTTCTACTACCTCCTGTCCATGCCCTGCTAGAGCCGAAAGACAAGGTATATTGAATTACAAATTTTATTAGTTTATGATAACTTTAGTCATAACACTAATAGTATGCTCATTTTTCGGGGACATAGAGGTCCTCCCTCCTTCTAATTTTATGGATGACGTACCTAAAGAATGGGTGATGAGAAAGAGAGGGGTATCGTGGAAGCTATGGAGTCCTGTCATTGAACAAGGGATGAAGAGAATGAAGAGAGTACGCTCGTACAATTCGATTTGCAAGATCCCTGTTAAGTTCAATAAACAGTTTTCCACATACCTCGTCAATCCTAGGAGAGCAAAGGAGTTGAAAAAGATGGTTAGAAGCTCGAGGGTGCTTCCATGGTTCATGGATCTCCTAACACCCATTACATTCACGAATGACGACGTATGTATTTCAAATTTCATGTCAGTTCGTTTGGTCATTAACAAGTTGCTATTCACTGTTTGCAGACGATGGACACATTGTTTCTTTTCACACAGAAAAAATTACAGGATAATGTCGATCCATCACATAGGAAGAAAAGCTTCACTACAGCCAACCGTACCATAGTAGTAAGTTTAAATTTTCCTGATTAGGTTGTTAGTCATACCTTTTTGCTAATGTGTGTTTTTCTTGACACTATTGTGCAAAATTGTGTACGGCGTAGCCCGGGGTTGTACGAGGAGATTAAGAGGAACACTTGTCTAGTTGATGTTGAGTACACTTAGGTCAAAGATGCCACCGTTTTGAAATACGTAATGGAGAAACTATTGGACTACGGCAAGGCATGA

mRNA sequence

ATGGACGATGTCTTCATGCATGTTTCCGTTTTGGAGATCGATGACCAACATGTTGATGATGAGGCAGAAACATCTATAAGTGAAAACATAGGAGATGGATGCCTACCGATCAATATATCTTCAGGGGGTGAGGATGTTCTACTACCTCCTGTCCATGCCCTGCTAGAGCCGAAAGACAAGGTCCTCCCTCCTTCTAATTTTATGGATGACGTACCTAAAGAATGGGTGATGAGAAAGAGAGGGGTATCGTGGAAGCTATGGAGTCCTGTCATTGAACAAGGGATGAAGAGAATGAAGAGAGTACGCTCGTACAATTCGATTTGCAAGATCCCTGTTAAGTTCAATAAACAGTTTTCCACATACCTCGTCAATCCTAGGAGAGCAAAGGAGTTGAAAAAGATGGTTAGAAGCTCGAGGGTGCTTCCATGGTTCATGGATCTCCTAACACCCATTACATTCACGAATGACGACAAAAAATTACAGGATAATGTCGATCCATCACATAGGAAGAAAAGCTTCACTACAGCCAACCGTACCATAGTAGTCAAAGATGCCACCGTTTTGAAATACGTAATGGAGAAACTATTGGACTACGGCAAGGCATGA

Coding sequence (CDS)

ATGGACGATGTCTTCATGCATGTTTCCGTTTTGGAGATCGATGACCAACATGTTGATGATGAGGCAGAAACATCTATAAGTGAAAACATAGGAGATGGATGCCTACCGATCAATATATCTTCAGGGGGTGAGGATGTTCTACTACCTCCTGTCCATGCCCTGCTAGAGCCGAAAGACAAGGTCCTCCCTCCTTCTAATTTTATGGATGACGTACCTAAAGAATGGGTGATGAGAAAGAGAGGGGTATCGTGGAAGCTATGGAGTCCTGTCATTGAACAAGGGATGAAGAGAATGAAGAGAGTACGCTCGTACAATTCGATTTGCAAGATCCCTGTTAAGTTCAATAAACAGTTTTCCACATACCTCGTCAATCCTAGGAGAGCAAAGGAGTTGAAAAAGATGGTTAGAAGCTCGAGGGTGCTTCCATGGTTCATGGATCTCCTAACACCCATTACATTCACGAATGACGACAAAAAATTACAGGATAATGTCGATCCATCACATAGGAAGAAAAGCTTCACTACAGCCAACCGTACCATAGTAGTCAAAGATGCCACCGTTTTGAAATACGTAATGGAGAAACTATTGGACTACGGCAAGGCATGA

Protein sequence

MDDVFMHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKDKVLPPSNFMDDVPKEWVMRKRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVKFNKQFSTYLVNPRRAKELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSFTTANRTIVVKDATVLKYVMEKLLDYGKA

Homology

[Close]

BLAST of PI0003900 vs. ExPASy TrEMBL
Match: A0A5D3DA67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00570 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.0e-27
Identity = 84/192 (43.75%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 12  EIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKDKVLPPSNFMDDV 71
           +IDDQ+VDDE  T+ISE+  D  +P++IS G                          + +
Sbjct: 27  DIDDQNVDDEVGTTISEDSEDDIIPVDISLG--------------------------EVI 86

Query: 72  PKEWVMRKRGVSWKLWSPVIE--QGMKRMKRVRSYNSICKIPVKFNKQFSTYLVNPRRAK 131
           PKE   RKR V  KL S VI+  QG KR K+VR YN  CKI  KF+KQF  YL++PRR K
Sbjct: 87  PKEKTTRKRDVLRKLQSSVIKQAQGKKRRKKVRPYNPACKILAKFDKQFFAYLIDPRRKK 146

Query: 132 ELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSFTTANRTIVVKDATVLK 191
           EL+K VR  R+L WF DLLTP TFTND+                        VKDAT+ K
Sbjct: 147 ELRKTVRGLRMLSWFRDLLTPTTFTNDN------------------------VKDATIQK 168

Query: 192 YVMEKLLDYGKA 202
           YV+E+L +Y KA
Sbjct: 207 YVLEELPNYNKA 168

[Close]

BLAST of PI0003900 vs. ExPASy TrEMBL
Match: A0A5A7U7N5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00410 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22
Identity = 79/188 (42.02%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 1   MDDVFMHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPK-- 60
           +DD F+++    ID Q  ++EA TSISE+  DG + I++ S GEDV  PPV  +L+ K  
Sbjct: 55  VDDEFVNIPAPIIDAQPTNEEARTSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYE 114

Query: 61  -----DKVLPPSNFMDDVPKEWVMRKRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVK 120
                 +V  P  F   VPK+   RKR +  KL                      +IP+K
Sbjct: 115 PIEFDVEVKLPYVFSHVVPKKKTTRKRDIRKKL----------------------RIPMK 174

Query: 121 FNKQFSTYLVNPRRAKELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSF 180
           F+KQF  YL +PR+ KEL+K VRSSRVL WFMDLL+P TF ++D  ++     SH KK F
Sbjct: 175 FDKQFLAYLSDPRKEKELQKTVRSSRVLSWFMDLLSPTTFMDED--IRSKYCSSHVKKRF 217

Query: 181 TTANRTIV 182
           TT +R IV
Sbjct: 235 TTVDRAIV 217

[Close]

BLAST of PI0003900 vs. ExPASy TrEMBL
Match: A0A5A7TSM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00310 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-12
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 6  MHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKD---KVL 65
          M + +  ID QHVDD+  TSISE+  DG +PI+ISS GEDV  PPV  LLE K+   KV+
Sbjct: 1  MDIPISNIDKQHVDDKTRTSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEKGIKVI 60

Query: 66 PPSNFMDDVPKEWVMRKRGV 83
          PP +F+D VPK+   RKRG+
Sbjct: 61 PPFDFIDVVPKKRTTRKRGI 80

[Close]

BLAST of PI0003900 vs. ExPASy TrEMBL
Match: A0A0A0KIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-11
Identity = 57/142 (40.14%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 3   DVFMHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDV--LLP---PVHALLEP 62
           D F+ V    IDD+ VD+E  TS+S+N  DG +PI++ S GED+  L P   P   LLE 
Sbjct: 230 DAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDVPSKGEDMPPLPPQPLPPQPLLES 289

Query: 63  KDKVLPPSNFMDDVPKEWVMRKRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVKFNKQ 122
           KD+   P  F D VPK+ + +K                          ++C I VK N Q
Sbjct: 290 KDE---PLVFSDVVPKKGITKK--------------------------TVCNILVKSNMQ 342

Query: 123 FSTYLVNPRRAKELKKMVRSSR 140
           F  YLV P+RA EL K VRSSR
Sbjct: 350 FLVYLVEPQRATELWKTVRSSR 342

[Close]

BLAST of PI0003900 vs. ExPASy TrEMBL
Match: A0A5D3BBM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00170 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.8e-11
Identity = 59/168 (35.12%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 19  DDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKDKVLPPSNFMDDVPKEWVMR 78
           D+E  TSIS ++ DG + I++ S G+DV  PP   +L+PK +            KE  + 
Sbjct: 116 DEEMRTSISNDLRDGIISIDVPSEGKDVPPPPPQPMLKPKVR-------KGHQGKEVYLG 175

Query: 79  KRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVKFNKQFSTYLVNPRRAKELKKMVRSS 138
             G       P +    KR++  R                      P+  KEL K +RSS
Sbjct: 176 NCG-------PQLLNKDKRLREER---------------------EPQGKKELWKTIRSS 235

Query: 139 RVLPWFMDLLTPITFTNDD------KKLQDNVDPSHRKKSFTTANRTI 181
             L WF+DLLTP TFT+DD      KKLQ N DP H KK FT  +  I
Sbjct: 236 SALSWFLDLLTPQTFTDDDVCTSNLKKLQVNFDPLHMKKCFTMVDHAI 248

[Close]

BLAST of PI0003900 vs. NCBI nr
Match: KAA0041004.1 (hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa] >TYK20360.1 hypothetical protein E5676_scaffold228G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-27
Identity = 84/192 (43.75%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 12  EIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKDKVLPPSNFMDDV 71
           +IDDQ+VDDE  T+ISE+  D  +P++IS G                          + +
Sbjct: 27  DIDDQNVDDEVGTTISEDSEDDIIPVDISLG--------------------------EVI 86

Query: 72  PKEWVMRKRGVSWKLWSPVIE--QGMKRMKRVRSYNSICKIPVKFNKQFSTYLVNPRRAK 131
           PKE   RKR V  KL S VI+  QG KR K+VR YN  CKI  KF+KQF  YL++PRR K
Sbjct: 87  PKEKTTRKRDVLRKLQSSVIKQAQGKKRRKKVRPYNPACKILAKFDKQFFAYLIDPRRKK 146

Query: 132 ELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSFTTANRTIVVKDATVLK 191
           EL+K VR  R+L WF DLLTP TFTND+                        VKDAT+ K
Sbjct: 147 ELRKTVRGLRMLSWFRDLLTPTTFTNDN------------------------VKDATIQK 168

Query: 192 YVMEKLLDYGKA 202
           YV+E+L +Y KA
Sbjct: 207 YVLEELPNYNKA 168

[Close]

BLAST of PI0003900 vs. NCBI nr
Match: KAA0051324.1 (hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-22
Identity = 79/188 (42.02%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 1   MDDVFMHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPK-- 60
           +DD F+++    ID Q  ++EA TSISE+  DG + I++ S GEDV  PPV  +L+ K  
Sbjct: 55  VDDEFVNIPAPIIDAQPTNEEARTSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYE 114

Query: 61  -----DKVLPPSNFMDDVPKEWVMRKRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVK 120
                 +V  P  F   VPK+   RKR +  KL                      +IP+K
Sbjct: 115 PIEFDVEVKLPYVFSHVVPKKKTTRKRDIRKKL----------------------RIPMK 174

Query: 121 FNKQFSTYLVNPRRAKELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSF 180
           F+KQF  YL +PR+ KEL+K VRSSRVL WFMDLL+P TF ++D  ++     SH KK F
Sbjct: 175 FDKQFLAYLSDPRKEKELQKTVRSSRVLSWFMDLLSPTTFMDED--IRSKYCSSHVKKRF 217

Query: 181 TTANRTIV 182
           TT +R IV
Sbjct: 235 TTVDRAIV 217

[Close]

BLAST of PI0003900 vs. NCBI nr
Match: KAA0046543.1 (hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK28714.1 hypothetical protein E5676_scaffold403G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-12
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 6  MHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKD---KVL 65
          M + +  ID QHVDD+  TSISE+  DG +PI+ISS GEDV  PPV  LLE K+   KV+
Sbjct: 1  MDIPISNIDKQHVDDKTRTSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEKGIKVI 60

Query: 66 PPSNFMDDVPKEWVMRKRGV 83
          PP +F+D VPK+   RKRG+
Sbjct: 61 PPFDFIDVVPKKRTTRKRGI 80

[Close]

BLAST of PI0003900 vs. NCBI nr
Match: KAA0063468.1 (hypothetical protein E6C27_scaffold977G00560 [Cucumis melo var. makuwa] >TYJ95758.1 hypothetical protein E5676_scaffold110G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 59/168 (35.12%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 19  DDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEPKDKVLPPSNFMDDVPKEWVMR 78
           D+E  TSIS ++ DG + I++ S G+DV  PP   +L+PK +            KE  + 
Sbjct: 116 DEEMRTSISNDLRDGIISIDVPSEGKDVPPPPPQPMLKPKVR-------KGHQGKEVYLG 175

Query: 79  KRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVKFNKQFSTYLVNPRRAKELKKMVRSS 138
             G       P +    KR++  R                      P+  KEL K +RSS
Sbjct: 176 NCG-------PQLLNKDKRLREER---------------------EPQGKKELWKTIRSS 235

Query: 139 RVLPWFMDLLTPITFTNDD------KKLQDNVDPSHRKKSFTTANRTI 181
             L WF+DLLTP TFT+DD      KKLQ N DP H KK FT  +  I
Sbjct: 236 SALSWFLDLLTPQTFTDDDVCTSNLKKLQVNFDPLHMKKCFTMVDHAI 248

[Close]

BLAST of PI0003900 vs. NCBI nr
Match: KAA0043285.1 (hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK29349.1 hypothetical protein E5676_scaffold129G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-10
Identity = 61/185 (32.97%), Postives = 82/185 (44.32%), Query Frame = 0


Query: 1   MDDVFMHVSVLEIDDQHVDDEAETSISENIGDGCLPINISSGGEDVLLPPVHALLEP--- 60
           ++DVF+ V  L+IDD ++++E  TSI E+  DG L      G    +    H LL P   
Sbjct: 178 VEDVFVDVFSLDIDDYYINNEIGTSICEDPEDGILRSTYLQG----VRMSHHLLLNPPRT 237

Query: 61  -KDKVLPPSNFMDDVPKEWVMRKRGVSWKLWSPVIEQGMKRMKRVRSYNSICKIPVKFNK 120
            +  V+PP +F+D VPK+   RKRG+ WK  S VIEQG  + +R R+ +           
Sbjct: 238 ERRDVIPPFDFIDVVPKKRTTRKRGIPWKFQSLVIEQGQGKKRRKRTID----------- 297

Query: 121 QFSTYLVNPRRAKELKKMVRSSRVLPWFMDLLTPITFTNDDKKLQDNVDPSHRKKSFTTA 180
                                             I F    KKLQDNVD  H KKSF   
Sbjct: 298 ----------------------------------ILFLFTQKKLQDNVDALHMKKSFIIV 313

Query: 181 NRTIV 182
           + TIV
Sbjct: 358 DYTIV 313

The following BLAST results are available for this feature:

BLAST of PI0003900 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DA67	2.0e-27	43.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U7N5	1.9e-22	42.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TSM6	2.3e-12	55.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KIM1	3.4e-11	40.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1	[more]
A0A5D3BBM3	5.8e-11	35.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0003900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041004.1	4.1e-27	43.75	hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa] >TYK203...	[more]
KAA0051324.1	3.9e-22	42.02	hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa]	[more]
KAA0046543.1	4.8e-12	55.00	hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK2871...	[more]
KAA0063468.1	1.2e-10	35.12	hypothetical protein E6C27_scaffold977G00560 [Cucumis melo var. makuwa] >TYJ9575...	[more]
KAA0043285.1	2.7e-10	32.97	hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK293...	[more]

BLAST of PI0003900 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003900.1	PI0003900.1	mRNA