PI0003892 (gene) Melon (PI 482460) v1

Overview


Name	PI0003892
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 11970927 .. 11971889 (+)
RNA-Seq Expression	PI0003892
Synteny	PI0003892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCCATGTCCGACCCAGACTAGAGATAGAGAGGTTTCTGTGAAGGCTCTCGGTAGGTTTGAACCTCTTTGGCCAAGAAAGTCAATGGTTCTCAAGGAAATCTCAGGGTCATTCTCGACCAAGATTGATAAATGAATCGCGTGACATCTCTGATAGCATTTACTCTAAACATCCAAATAGTTTAGAGGGAAATAGTCCTTAGAATAATGTATCTTTTATGTGACAGATGAAAACCGGAGAGACCCACATTTGATCGGTTTCCCTTCCATTTTCGCAGGACCCAAATCTTCTCACCGCCCAAACTCCTCTCAACTTCCTGATGTCTCTCGCCGCCGTTTACTCGGCTCTACCACTGTGGATCTGACCGTTGTTTACGCCGGCCGTTTCAGACCTCTCTCGACCACGGATCTGTACGCAGCGTCGTTCTTGTGGGATCTGACCTCATTGCAGCTTGTCTCGCCGGATCTAAACAAAATCTCGCCCTTGACACACCGACGAATCTCAACGGATATCGCCGTATCAGTCTCGTTGGTCCACTCGGTAAGTCCCAACCTCACGTCTGTGTGGATACTGTCAAGTCCATACATACTGCAGAAGCATTCAACTCTCTTAGTTTTGCTTCCATTCCATCAGTTTTTACATCGCTACATGCCAGTTGTTGAAACCAATCTAGATTCTAAAGAATGTGCAGTACAGAGTTCTTTTTAGGGTTTTTTTTAAAAAACCCTAAAAGAAAAAAAAAATACTTGAGAGGAAATGTAACTACAATCGATTTCACTCTTCATATAATTGAAACTTTATTTGTCAATAGGCACAGTTATTCAGATATATCAAAGCCAGACTTTTCTTTCGAAAATGGGAATAAAGTTGGCACTGATGGAGGTGTTACAGGGAATGTGGCTCAATTGCAGGATAACTCTAGAGCACCAGATGGCAATTCTTTATTCACTTGCAGGATAA

mRNA sequence

ATGAGGCCATGTCCGACCCAGACTAGAGATAGAGAGGTTTCTGTGAAGGCTCTCGGACCCAAATCTTCTCACCGCCCAAACTCCTCTCAACTTCCTGATGTCTCTCGCCGCCGTTTACTCGGCTCTACCACTGTGGATCTGACCGTTGTTTACGCCGGCCGTTTCAGACCTCTCTCGACCACGGATCTGTACGCAGCGTCGTTCTTGTGGGATCTGACCTCATTGCAGCTTGTCTCGCCGGATCTAAACAAAATCTCGCCCTTGACACACCGACGAATCTCAACGGATATCGCCGTATCAGTCTCGTTGGTCCACTCGGGAATGTGGCTCAATTGCAGGATAACTCTAGAGCACCAGATGGCAATTCTTTATTCACTTGCAGGATAA

Coding sequence (CDS)

ATGAGGCCATGTCCGACCCAGACTAGAGATAGAGAGGTTTCTGTGAAGGCTCTCGGACCCAAATCTTCTCACCGCCCAAACTCCTCTCAACTTCCTGATGTCTCTCGCCGCCGTTTACTCGGCTCTACCACTGTGGATCTGACCGTTGTTTACGCCGGCCGTTTCAGACCTCTCTCGACCACGGATCTGTACGCAGCGTCGTTCTTGTGGGATCTGACCTCATTGCAGCTTGTCTCGCCGGATCTAAACAAAATCTCGCCCTTGACACACCGACGAATCTCAACGGATATCGCCGTATCAGTCTCGTTGGTCCACTCGGGAATGTGGCTCAATTGCAGGATAACTCTAGAGCACCAGATGGCAATTCTTTATTCACTTGCAGGATAA

Protein sequence

MRPCPTQTRDREVSVKALGPKSSHRPNSSQLPDVSRRRLLGSTTVDLTVVYAGRFRPLSTTDLYAASFLWDLTSLQLVSPDLNKISPLTHRRISTDIAVSVSLVHSGMWLNCRITLEHQMAILYSLAG

Homology

The following BLAST results are available for this feature:

BLAST of PI0003892 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003892 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003892 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003892 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003892.1	PI0003892.1	mRNA