PI0003840 (gene) Melon (PI 482460) v1

Overview
NamePI0003840
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 27152315 .. 27152644 (-)
RNA-Seq ExpressionPI0003840
SyntenyPI0003840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTAAGAAACTTTTTACGGTTTCCATGGTTGTCTTGGTGATATTCGCATGTTTTGTCTTATCAGGTATGTTCTTATCTCATAACCCTTCTAATCTCATAATATTATGTTCTTCTGGGTGAAAAAAAATATTATTAAAAATGTTGATGTTTTATCCTATGGTAGCAAAAGGAGATCTATTCATGAGTTGTATAGGACCCTGCTCAAACCCAGACGATAATGTTTCGTGCAATAATGATTGTCTCAAACAAACCAAAAATGGTGGATTTTGCTATCCCAAGTTAGATGGTGCTTCAAATGAAAAGGATTGTTGTTGTTACATTTGA

mRNA sequence

ATGGCAATTAAGAAACTTTTTACGGTTTCCATGGTTGTCTTGGTGATATTCGCATGTTTTGTCTTATCAGCAAAAGGAGATCTATTCATGAGTTGTATAGGACCCTGCTCAAACCCAGACGATAATGTTTCGTGCAATAATGATTGTCTCAAACAAACCAAAAATGGTGGATTTTGCTATCCCAAGTTAGATGGTGCTTCAAATGAAAAGGATTGTTGTTGTTACATTTGA

Coding sequence (CDS)

ATGGCAATTAAGAAACTTTTTACGGTTTCCATGGTTGTCTTGGTGATATTCGCATGTTTTGTCTTATCAGCAAAAGGAGATCTATTCATGAGTTGTATAGGACCCTGCTCAAACCCAGACGATAATGTTTCGTGCAATAATGATTGTCTCAAACAAACCAAAAATGGTGGATTTTGCTATCCCAAGTTAGATGGTGCTTCAAATGAAAAGGATTGTTGTTGTTACATTTGA

Protein sequence

MAIKKLFTVSMVVLVIFACFVLSAKGDLFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFCYPKLDGASNEKDCCCYI
Homology
BLAST of PI0003840 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGD-LFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFC 60
          MA +KL T+S+VVL+IFAC   + KGD L + C+ PCS+  D+ SC NDC+++    GFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLDGASNEKDCCCYI 77
          YPKL   S +KDCCC +
Sbjct: 61 YPKL--PSTDKDCCCNV 75

BLAST of PI0003840 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.7e-12
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGD-LFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFC 60
          MA +KL T+S+VVLVIF C V + KGD L + C+ PC +  D+ SC NDC+++    GFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLDGASNEKDCCC 75
          YPKL   S +KDCCC
Sbjct: 61 YPKL--PSTDKDCCC 73

BLAST of PI0003840 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.5e-12
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGDLFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFCY 60
          M  +KLF VSM+V V F+CF  S +GD   +C+ PCSN + ++ CN  C++Q +  GFC 
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLDGASNEKDCCC 75
          PKL G S+ K CCC
Sbjct: 61 PKLPGISDMKVCCC 74

BLAST of PI0003840 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 22 LSAKGDLF-MSCIGPCSNPDDNVSCNNDCLKQTKNGGFCYPKLDGASNEKDCCCYI 77
          ++AKGD+  + C+ PCS+  D+ SC NDC+++    GFCYPKL   S +KDCCC +
Sbjct: 1  MTAKGDILNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKL--PSTDKDCCCNV 54

BLAST of PI0003840 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 5.7e-14
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGDLFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFCY 60
          MA +KLFTV  +V+++F  F  SAKGD+FM CI PC +  D+ SC +DC++  K  GFCY
Sbjct: 1  MASRKLFTVFAIVMMMF-YFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCY 60

Query: 61 PKLDGASNEKDCCC 75
          PKL   +NEKDCCC
Sbjct: 61 PKLPSVTNEKDCCC 73

BLAST of PI0003840 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-12
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGD-LFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFC 60
          MA +KL T+S+VVL+IFAC   + KGD L + C+ PCS+  D+ SC NDC+++    GFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLDGASNEKDCCCYI 77
          YPKL   S +KDCCC +
Sbjct: 61 YPKL--PSTDKDCCCNV 75

BLAST of PI0003840 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-12
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGD-LFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFC 60
          MA +KL TVS+V+L+I AC V + KGD L ++C+ PCS+  D+ SC NDC+++    GFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLDGASNEKDCCCYI 77
          YPKL   S +KDCCC +
Sbjct: 61 YPKL--PSTDKDCCCNV 75

BLAST of PI0003840 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-11
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0

Query: 1  MAIKKLFTVSMVVLVIFACFVLSAKGDLFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFCY 60
          M  +KLF VSM+V V F+CF  S +GD   +C+ PCSN + ++ CN  C++Q +  GFC 
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKLDGASNEKDCCC 75
          PKL G S+ K CCC
Sbjct: 61 PKLPGISDMKVCCC 74

BLAST of PI0003840 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 24 AKGD-LFMSCIGPCSNPDDNVSCNNDCLKQTKNGGFCYPKLDGASNEKDCCC 75
          AKGD L M C+ PCS+  D+ SC NDC+K+    GFCYPKL   S +KDCCC
Sbjct: 14 AKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKL--PSTDKDCCC 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LHG91.5e-1251.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG55.7e-1253.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0L1R87.5e-1248.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A0A0LKF51.5e-0748.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6586428.15.7e-1455.41hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN61228.13.1e-1251.95hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651697.14.1e-1251.95hypothetical protein Csa_006343 [Cucumis sativus][more]
KGN54497.11.5e-1148.65hypothetical protein Csa_012842 [Cucumis sativus][more]
KAE8651701.12.3e-0757.69hypothetical protein Csa_006400, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003840.1PI0003840.1mRNA