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PI0003746 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTATTTCCATTCTTTTTTCCATTTCAATACAATTTCAGATTCCTTCGCTCTCCCCTCTTTCTCGCTTTTTATATAAACACGCTTTCAACCTCCCACATCGCCTTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAATCTTCTTCACTCACACGCAGATACTAATACGCCGATTAAGTTTCGGTACGTTTCTGTTCCCCCCTCTGTGTATTACTCTTAGATGGGGGTGTGTTTCTCAGTGGAATAAGTTTTAGATCTGTTTGCCAATGTATATGGGTTTTTTTTTTTTTGGTTTAGGTTTCTTCCTTTCCAGACCTCTCTGATGGAGATGGGGTTCTTTGTTTTTGGTTTTGGGTTTTTTTTAATATCCCTTCGAACTCCATCCCTTTTTTTTGGATGAATTTTATTGGGTTTTCTTTGTTTCTGAAACGGTTTTATGTGTTGTGCAGACGGAAAATTTCCATGCTCTGTTTTTGCTCTGTTTTTGTGATATGTTTTGTTTGGTGTGAGCGTGGGGTGGATTCATTCGATTGTTTTGTTTGTGCCAAAGATTAATAAGCCAATAGAACTTTTGTCAAGTGGTGAGTTACGAAAATCTTGTTATAGGTGTTCTTGTTGGGTCTTTTGAATAGAAAGTTCACTGGGATTTTCCACCTCTTTGGAAAATGGAAGAGTAGTTATGTGGAGTTCTGATTTCTATTGCAACTTGGGTTTTGGTTCACTGTATATTGTTTTTTGTTATTAATTGTTGGGATTGTGATTTATCTTCATTTAGGAAAATTCTTAGTTATGTATTTATTCCGTTCTGGTTTCTTCTATGCATGATTATGCCTCTCGGATCTCTTTTCCAAGTAACTGATCCGAATTTATGTGTGTACCTAAAGATTGATAGTTCTTTTCACTTTCACCTGCACCGAGTTCTTCTGCTTTAAAAGATCGCTTATGAATGCAGAAGATTCTGAATCTCTACCATGTTATGTAGTAAATTGGAACTTCTAACCATTGTTTTAGCATAACGTAATCTAGGGAAGTTCTTGGATGGATTGTGTCTGTGAGAGATTCATCACGAATCTCTATCATTTGAATTTCTTATTGATTAAATAAATTGAATCTGGGTCTGTCAAGATCAGCATATTTTGATATTTATGGGAACTTCAGAAATCCTCGACATCATTCTCCACTTGAGGGTTTCGTGATAGAATTTTGAAGAAGCGGCCATTCAGAATACAATAATCTATAAGCTTACCCATGTTCGTGTCAGTTCTGGGACCCAATTAATATTATATTCGAACCAGTGGATTAGGATGATTTGTTTGGCCGTTTCATCAGTTATCTTATCACTGCATTGAATGGGATACTTTTGGTTTATTAATGAATTCCTAGTAAATCGTGTCTTCATAGCTTCTTTTCCGAATTGTTGATTCTTTTGTCTGCTTCTTTGCATCCTTGTATTTACAAACAGCAGCCTTTTACTGTGAATTTTTTATTAAGTTGTGTGTGATTCAATTGATCTTCTCTTAGACTTTAGTTGTTCTGAGTTCTGACCTTGTTTCTTGGACATGTTTCTCAGCCTGAGGCATTATAAAAAGAAGACTGTGCTGAAACATAAACCTGGGCATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAAGCTCACTTTAGATCATTTCTAGGCATTGGATGTAGATATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTACAAATTTCCTTCAATCTGTTTCATGGGATTGGTGGATGTAAAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATCTGATGAGCATTATCATAAGGATCTCCTAATAAGTAATCCATGAAAAAGAATGAAGATAGGCAAAGTTTCA CTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTATTTCCATTCTTTTTTCCATTTCAATACAATTTCAGATTCCTTCGCTCTCCCCTCTTTCTCGCTTTTTATATAAACACGCTTTCAACCTCCCACATCGCCTTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAATCTTCTTCACTCACACGCAGATACTAATACGCCGATTAAGTTTCGCCTGAGGCATTATAAAAAGAAGACTGTGCTGAAACATAAACCTGGGCATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAAGCTCACTTTAGATCATTTCTAGGCATTGGATGTAGATATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTACAAATTTCCTTCAATCTGTTTCATGGGATTGGTGGATGTAAAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATCTGATGAGCATTATCATAAGGATCTCCTAATAAGTAATCCATGAAAAAGAATGAAGATAGGCAAAGTTTCA ATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAA MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF Homology
BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52 Identity = 116/257 (45.14%), Postives = 156/257 (60.70%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 8.1e-44 Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35 Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.9e-30 Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: O35445 (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14 Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A0A0KB39 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 8.2e-132 Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A1S3BJB6 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 7.2e-128 Identity = 230/252 (91.27%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A5A7V6F7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001700 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.2e-109 Identity = 198/220 (90.00%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A6J1CHP4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111010997 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 2.0e-101 Identity = 194/254 (76.38%), Postives = 215/254 (84.65%), Query Frame = 0
BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A6J1FXR1 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111448157 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 8.9e-94 Identity = 176/224 (78.57%), Postives = 192/224 (85.71%), Query Frame = 0
BLAST of PI0003746 vs. NCBI nr
Match: XP_004139942.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KGN46743.1 hypothetical protein Csa_020992 [Cucumis sativus]) HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131 Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of PI0003746 vs. NCBI nr
Match: XP_008448288.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_016900554.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127 Identity = 230/252 (91.27%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of PI0003746 vs. NCBI nr
Match: XP_038901529.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]) HSP 1 Score: 431.4 bits (1108), Expect = 5.3e-117 Identity = 218/253 (86.17%), Postives = 229/253 (90.51%), Query Frame = 0
BLAST of PI0003746 vs. NCBI nr
Match: KAA0062066.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa]) HSP 1 Score: 406.0 bits (1042), Expect = 2.4e-109 Identity = 198/220 (90.00%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of PI0003746 vs. NCBI nr
Match: XP_022140292.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]) HSP 1 Score: 378.6 bits (971), Expect = 4.1e-101 Identity = 194/254 (76.38%), Postives = 215/254 (84.65%), Query Frame = 0
BLAST of PI0003746 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 ) HSP 1 Score: 178.7 bits (452), Expect = 5.8e-45 Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of PI0003746 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 ) HSP 1 Score: 178.7 bits (452), Expect = 5.8e-45 Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of PI0003746 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 ) HSP 1 Score: 151.4 bits (381), Expect = 9.9e-37 Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0
BLAST of PI0003746 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 ) HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31 Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 0
BLAST of PI0003746 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22 Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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