PI0003746 (gene) Melon (PI 482460) v1

Overview


Name	PI0003746
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase RMA1H1
Location	chr11: 13063137 .. 13065800 (+)
RNA-Seq Expression	PI0003746
Synteny	PI0003746

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTATTTCCATTCTTTTTTCCATTTCAATACAATTTCAGATTCCTTCGCTCTCCCCTCTTTCTCGCTTTTTATATAAACACGCTTTCAACCTCCCACATCGCCTTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAATCTTCTTCACTCACACGCAGATACTAATACGCCGATTAAGTTTCGGTACGTTTCTGTTCCCCCCTCTGTGTATTACTCTTAGATGGGGGTGTGTTTCTCAGTGGAATAAGTTTTAGATCTGTTTGCCAATGTATATGGGTTTTTTTTTTTTTGGTTTAGGTTTCTTCCTTTCCAGACCTCTCTGATGGAGATGGGGTTCTTTGTTTTTGGTTTTGGGTTTTTTTTAATATCCCTTCGAACTCCATCCCTTTTTTTTGGATGAATTTTATTGGGTTTTCTTTGTTTCTGAAACGGTTTTATGTGTTGTGCAGACGGAAAATTTCCATGCTCTGTTTTTGCTCTGTTTTTGTGATATGTTTTGTTTGGTGTGAGCGTGGGGTGGATTCATTCGATTGTTTTGTTTGTGCCAAAGATTAATAAGCCAATAGAACTTTTGTCAAGTGGTGAGTTACGAAAATCTTGTTATAGGTGTTCTTGTTGGGTCTTTTGAATAGAAAGTTCACTGGGATTTTCCACCTCTTTGGAAAATGGAAGAGTAGTTATGTGGAGTTCTGATTTCTATTGCAACTTGGGTTTTGGTTCACTGTATATTGTTTTTTGTTATTAATTGTTGGGATTGTGATTTATCTTCATTTAGGAAAATTCTTAGTTATGTATTTATTCCGTTCTGGTTTCTTCTATGCATGATTATGCCTCTCGGATCTCTTTTCCAAGTAACTGATCCGAATTTATGTGTGTACCTAAAGATTGATAGTTCTTTTCACTTTCACCTGCACCGAGTTCTTCTGCTTTAAAAGATCGCTTATGAATGCAGAAGATTCTGAATCTCTACCATGTTATGTAGTAAATTGGAACTTCTAACCATTGTTTTAGCATAACGTAATCTAGGGAAGTTCTTGGATGGATTGTGTCTGTGAGAGATTCATCACGAATCTCTATCATTTGAATTTCTTATTGATTAAATAAATTGAATCTGGGTCTGTCAAGATCAGCATATTTTGATATTTATGGGAACTTCAGAAATCCTCGACATCATTCTCCACTTGAGGGTTTCGTGATAGAATTTTGAAGAAGCGGCCATTCAGAATACAATAATCTATAAGCTTACCCATGTTCGTGTCAGTTCTGGGACCCAATTAATATTATATTCGAACCAGTGGATTAGGATGATTTGTTTGGCCGTTTCATCAGTTATCTTATCACTGCATTGAATGGGATACTTTTGGTTTATTAATGAATTCCTAGTAAATCGTGTCTTCATAGCTTCTTTTCCGAATTGTTGATTCTTTTGTCTGCTTCTTTGCATCCTTGTATTTACAAACAGCAGCCTTTTACTGTGAATTTTTTATTAAGTTGTGTGTGATTCAATTGATCTTCTCTTAGACTTTAGTTGTTCTGAGTTCTGACCTTGTTTCTTGGACATGTTTCTCAGCCTGAGGCATTATAAAAAGAAGACTGTGCTGAAACATAAACCTGGGCATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAAGCTCACTTTAGATCATTTCTAGGCATTGGATGTAGATATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTACAAATTTCCTTCAATCTGTTTCATGGGATTGGTGGATGTAAAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATCTGATGAGCATTATCATAAGGATCTCCTAATAAGTAATCCATGAAAAAGAATGAAGATAGGCAAAGTTTCA

mRNA sequence

CTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTATTTCCATTCTTTTTTCCATTTCAATACAATTTCAGATTCCTTCGCTCTCCCCTCTTTCTCGCTTTTTATATAAACACGCTTTCAACCTCCCACATCGCCTTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAATCTTCTTCACTCACACGCAGATACTAATACGCCGATTAAGTTTCGCCTGAGGCATTATAAAAAGAAGACTGTGCTGAAACATAAACCTGGGCATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAAGCTCACTTTAGATCATTTCTAGGCATTGGATGTAGATATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTACAAATTTCCTTCAATCTGTTTCATGGGATTGGTGGATGTAAAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATCTGATGAGCATTATCATAAGGATCTCCTAATAAGTAATCCATGAAAAAGAATGAAGATAGGCAAAGTTTCA

Coding sequence (CDS)

ATGGAACAGCAGTACCTTGACGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAACATATATTTCAGATGCTGATGATGGAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGATTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTTTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACAATGCCAACAAGCGGAATGCCGGTGTCCCGTTTGCAAGGCCAAAGTCTCCCATGCTACTCTCGTTCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTTCAGATCGTGGCCCAGCCATCCCGCGCAGGCCTCTTGGGCGGCATGTTTGTGAGGCAGAGGCACCAGCATCTCCACCCCCCCAACTTCATTCCCACAACTATTCTCCTCAGTCACACTCATACTACTCACAAACACAAAACGAATACATCGCTTCGTCGATGCTCAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACATTTGGAAACACAACAACAAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAAGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTGTTATTCTAA

Protein sequence

MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF

Homology

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BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 116/257 (45.14%), Postives = 156/257 (60.70%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           M  + LD T  ++D  LG  K   D      + ++  S GFDCNICLD V +PV+TLCGH
Sbjct: 5   MALEQLDTTFNKHDTPLGKWKSMND------EVEENISGGFDCNICLDCVHEPVITLCGH 64

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGK-FQTTDASKAKAPS 120
           L+CWPCIYKW++ + +S++   Q + +CPVCKA+VS  TL+P+YG+  Q+T  S+ KAP 
Sbjct: 65  LYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAP- 124

Query: 121 DRGPAIPRRP----LGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSS 180
           + G  IP+RP     G H       ++P   L    Y  QS +     Q  Y++S MLS 
Sbjct: 125 NLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSP 184

Query: 181 SSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLS 240
              T N++     M G+  YAR FGN++T +YTYPNSY    +SS R+RR + QAD SL 
Sbjct: 185 GGATANMLQH--SMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLG 244

Query: 241 RICFFFFCCLVICLLLF 253
           RICFF FCC V CL+LF
Sbjct: 245 RICFFLFCCFVTCLILF 252

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BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.1e-44
Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 33  ADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCK 92
           +DD     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNY 152
           +KVSH+TLVP+YG+ + T   + K       ++P+RP+G  V   E P SP         
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSPYAST-DLRL 157

Query: 153 SPQSHSYYSQTQNEYIASSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLYTYPN 212
           S + H + S  +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + + YP+
Sbjct: 158 SQRVH-FNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPD 217

Query: 213 SYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           +Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

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BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATL 100
           FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+    Q +  CPVCK+ ++  +L
Sbjct: 42  FDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHV-QLSSVSVDQHQNNCPVCKSNITITSL 101

Query: 101 VPIYGKFQTTDASK--AKAPSDRGPAIPRRPLG---RHVCEAEAPASP-------PPQLH 160
           VP+YG+  ++ +S   +K        IPRRP     R+   + +  +P        P  H
Sbjct: 102 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 161

Query: 161 SHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYT 220
           +H YSP+    ++ T++  +A++++ S       ++PVIGMFGD +Y R FG T TN   
Sbjct: 162 NHQYSPRG---FTTTESTDLANAVMMS------FLYPVIGMFGDLVYTRIFG-TFTNTIA 221

Query: 221 YPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
            P              + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 222 QPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-30
Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 25  DNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQA 84
           D+ T +    D     FDCNICLD V+DPVVTLCGHLFCWPCI+KW +    S Q+  Q 
Sbjct: 8   DDTTLVDSGGD-----FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQY 67

Query: 85  E-----CRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPS-DRGPAIPRRPLGRHVCEAE 144
           +      +CPVCK+ VS ATLVPIYG+ Q    S +  PS   GP    R +G+ + E E
Sbjct: 68  DHKREPPKCPVCKSDVSEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGE 127

Query: 145 APASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYART 204
           +               Q + Y                      +  PV+G+  + +Y R 
Sbjct: 128 S---------------QRYMY---------------------RMPDPVMGVVCEMVYRRL 187

Query: 205 FGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           FG +++N+  Y        + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 188 FGESSSNMAPY-------RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of PI0003746 vs. ExPASy Swiss-Prot
Match: O35445 (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 36  GASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKV 95
           GAS  F+CNICL++ ++ VV++CGHL+CWPC+++WL        + +     CPVCKA +
Sbjct: 20  GASATFECNICLETAREAVVSVCGHLYCWPCLHQWL--------ETRPDRQECPVCKAGI 79

Query: 96  SHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGR 133
           S   +VP+YG+        ++ P D     P RP G+
Sbjct: 80  SREKVVPLYGR-------GSQKPQDPRLKTPPRPQGQ 101

[Close]

BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A0A0KB39 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.2e-132
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YL+ETLMQNDNSLGGD+LCLDNQ YISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLHCKKLSAQ+CQQ ECRCPVCKAKVS ATLVPIYGKFQTTDASKA+AP +
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLGRH CEAE PASP PQLHS NYSPQSHSYY+QTQNEYIASSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNV+NSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A1S3BJB6 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.2e-128
Identity = 230/252 (91.27%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+E LM NDNSLGGDKL LD QTYISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLH KKLSAQQCQQ ECRCPVCKAKVS ATL+PIYGKFQTTDASKAKAP +
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLG H CEAE PASP PQLHSHNYSPQSHSYYSQTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A5A7V6F7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001700 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.2e-109
Identity = 198/220 (90.00%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+E LM NDNSLGGDKL LD QTYISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLH KKLSAQQCQQ ECRCPVCKAKVS ATL+PIYGKFQTTDASKAKAP +
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLG H CEAE PASP PQLHSHNYSPQSHSYYSQTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSS 221
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSS
Sbjct: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSS 220

[Close]

BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A6J1CHP4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111010997 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 2.0e-101
Identity = 194/254 (76.38%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+ET+M++ NS G DK CLDNQT +SDAD GASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEETVMRS-NSFGEDKFCLDNQTCVSDADGGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPS 120
           LFCWPCIYKWLH K LSA QQCQ  E  CPVCKA+VSHA+LVP+YG+FQTT+ S+ KA S
Sbjct: 61  LFCWPCIYKWLHYKNLSAQQQCQPQENCCPVCKAEVSHASLVPLYGRFQTTNPSETKA-S 120

Query: 121 DRGPAIPRRPLGRHVCEAEAPASPPPQLHSHN-YSPQSHSYYSQTQNEYIASSMLSSSSI 180
             GPAIPRRPLG     AEAPASP PQLH HN Y P +HSY+ +T  +YI SSML SSSI
Sbjct: 121 QLGPAIPRRPLGPACGAAEAPASPSPQLHPHNYYLPHAHSYHPRTTQDYITSSMLGSSSI 180

Query: 181 TTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRIC 240
           TTNIIHPVIG FG+ IYAR FGNTTT+L+TYPNSYG+VSNSS RLRRH+MQADESLSRIC
Sbjct: 181 TTNIIHPVIGTFGEAIYARAFGNTTTSLHTYPNSYGHVSNSSARLRRHMMQADESLSRIC 240

Query: 241 FFFFCCLVICLLLF 253
           FFFFCCLV+C L F
Sbjct: 241 FFFFCCLVLCFLSF 252

[Close]

BLAST of PI0003746 vs. ExPASy TrEMBL
Match: A0A6J1FXR1 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111448157 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.9e-94
Identity = 176/224 (78.57%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 30  ISDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSA-QQCQQAECRC 89
           + +AD+G SHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKW+H K LS+ QQCQQ ECRC
Sbjct: 7   VPEADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRC 66

Query: 90  PVCKAKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLH 149
           PVCKA+VSHATLVP+YGKFQTT  SK K PS+ GPAIPRRPLG   C  E PASP  QLH
Sbjct: 67  PVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLG-PACGGEPPASPSAQLH 126

Query: 150 SHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYT 209
            HN        YSQ+ ++YIASSMLSSSSITTNIIHPVIGMFGD +Y RTFGNTT+NLYT
Sbjct: 127 HHN--------YSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTSNLYT 186

Query: 210 YPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           YPNSYG+VSNSSVRLRRHIMQADESLSRICFF FCCLV+CLLLF
Sbjct: 187 YPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLLLF 221

[Close]

BLAST of PI0003746 vs. NCBI nr
Match: XP_004139942.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KGN46743.1 hypothetical protein Csa_020992 [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YL+ETLMQNDNSLGGD+LCLDNQ YISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLHCKKLSAQ+CQQ ECRCPVCKAKVS ATLVPIYGKFQTTDASKA+AP +
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLGRH CEAE PASP PQLHS NYSPQSHSYY+QTQNEYIASSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNV+NSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of PI0003746 vs. NCBI nr
Match: XP_008448288.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_016900554.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo])

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127
Identity = 230/252 (91.27%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+E LM NDNSLGGDKL LD QTYISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLH KKLSAQQCQQ ECRCPVCKAKVS ATL+PIYGKFQTTDASKAKAP +
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLG H CEAE PASP PQLHSHNYSPQSHSYYSQTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of PI0003746 vs. NCBI nr
Match: XP_038901529.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 5.3e-117
Identity = 218/253 (86.17%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           ME QY++ETL+QN+NSL G+KLCLDNQT ISDADDGASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEHQYVEETLIQNNNSLRGNKLCLDNQTCISDADDGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPS 120
           LFCWPCIYKWL  K LSA QQCQQAECRCPVCKA+VSH TLVPIYGKFQT + SKAKAPS
Sbjct: 61  LFCWPCIYKWLQYKNLSAQQQCQQAECRCPVCKAEVSHTTLVPIYGKFQTINPSKAKAPS 120

Query: 121 DRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSIT 180
           + GPAIPRRPLGR  C  EAPASP PQLH  NYSPQS+SYYS+TQN YIASSMLSSSSIT
Sbjct: 121 NLGPAIPRRPLGR-ACGTEAPASPSPQLHPRNYSPQSNSYYSRTQNNYIASSMLSSSSIT 180

Query: 181 TNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICF 240
           TNIIHPVIGMFGD IY RTF NTT NLYTYPNSYG+VSNSSVRLRRHIMQADESLSRICF
Sbjct: 181 TNIIHPVIGMFGDAIYTRTFRNTTPNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICF 240

Query: 241 FFFCCLVICLLLF 253
           F FCCLVICLLLF
Sbjct: 241 FLFCCLVICLLLF 252

[Close]

BLAST of PI0003746 vs. NCBI nr
Match: KAA0062066.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa])

HSP 1 Score: 406.0 bits (1042), Expect = 2.4e-109
Identity = 198/220 (90.00%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+E LM NDNSLGGDKL LD QTYISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPSD 120
           LFCWPCIYKWLH KKLSAQQCQQ ECRCPVCKAKVS ATL+PIYGKFQTTDASKAKAP +
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 RGPAIPRRPLGRHVCEAEAPASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITT 180
            GPAIPRRPLG H CEAE PASP PQLHSHNYSPQSHSYYSQTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSS 221
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSS
Sbjct: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSS 220

[Close]

BLAST of PI0003746 vs. NCBI nr
Match: XP_022140292.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia])

HSP 1 Score: 378.6 bits (971), Expect = 4.1e-101
Identity = 194/254 (76.38%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MEQQYLDETLMQNDNSLGGDKLCLDNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYL+ET+M++ NS G DK CLDNQT +SDAD GASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEETVMRS-NSFGEDKFCLDNQTCVSDADGGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QQCQQAECRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPS 120
           LFCWPCIYKWLH K LSA QQCQ  E  CPVCKA+VSHA+LVP+YG+FQTT+ S+ KA S
Sbjct: 61  LFCWPCIYKWLHYKNLSAQQQCQPQENCCPVCKAEVSHASLVPLYGRFQTTNPSETKA-S 120

Query: 121 DRGPAIPRRPLGRHVCEAEAPASPPPQLHSHN-YSPQSHSYYSQTQNEYIASSMLSSSSI 180
             GPAIPRRPLG     AEAPASP PQLH HN Y P +HSY+ +T  +YI SSML SSSI
Sbjct: 121 QLGPAIPRRPLGPACGAAEAPASPSPQLHPHNYYLPHAHSYHPRTTQDYITSSMLGSSSI 180

Query: 181 TTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRIC 240
           TTNIIHPVIG FG+ IYAR FGNTTT+L+TYPNSYG+VSNSS RLRRH+MQADESLSRIC
Sbjct: 181 TTNIIHPVIGTFGEAIYARAFGNTTTSLHTYPNSYGHVSNSSARLRRHMMQADESLSRIC 240

Query: 241 FFFFCCLVICLLLF 253
           FFFFCCLV+C L F
Sbjct: 241 FFFFCCLVLCFLSF 252

[Close]

BLAST of PI0003746 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 178.7 bits (452), Expect = 5.8e-45
Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 33  ADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCK 92
           +DD     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNY 152
           +KVSH+TLVP+YG+ + T   + K       ++P+RP+G  V   E P SP         
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSPYAST-DLRL 157

Query: 153 SPQSHSYYSQTQNEYIASSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLYTYPN 212
           S + H + S  +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + + YP+
Sbjct: 158 SQRVH-FNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPD 217

Query: 213 SYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           +Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of PI0003746 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 178.7 bits (452), Expect = 5.8e-45
Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 33  ADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCK 92
           +DD     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSHNY 152
           +KVSH+TLVP+YG+ + T   + K       ++P+RP+G  V   E P SP         
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSPYAST-DLRL 157

Query: 153 SPQSHSYYSQTQNEYIASSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLYTYPN 212
           S + H + S  +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + + YP+
Sbjct: 158 SQRVH-FNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPD 217

Query: 213 SYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           +Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of PI0003746 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-37
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPVCKAKVSHATL 100
           FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+    Q +  CPVCK+ ++  +L
Sbjct: 42  FDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHV-QLSSVSVDQHQNNCPVCKSNITITSL 101

Query: 101 VPIYGKFQTTDASK--AKAPSDRGPAIPRRPLG---RHVCEAEAPASP-------PPQLH 160
           VP+YG+  ++ +S   +K        IPRRP     R+   + +  +P        P  H
Sbjct: 102 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 161

Query: 161 SHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYT 220
           +H YSP+    ++ T++  +A++++ S       ++PVIGMFGD +Y R FG T TN   
Sbjct: 162 NHQYSPRG---FTTTESTDLANAVMMS------FLYPVIGMFGDLVYTRIFG-TFTNTIA 221

Query: 221 YPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
            P              + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 222 QPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of PI0003746 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31
Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 25  DNQTYISDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQA 84
           D+ T +    D     FDCNICLD V+DPVVTLCGHLFCWPCI+KW +    S Q+  Q 
Sbjct: 8   DDTTLVDSGGD-----FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQY 67

Query: 85  E-----CRCPVCKAKVSHATLVPIYGKFQTTDASKAKAPS-DRGPAIPRRPLGRHVCEAE 144
           +      +CPVCK+ VS ATLVPIYG+ Q    S +  PS   GP    R +G+ + E E
Sbjct: 68  DHKREPPKCPVCKSDVSEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGE 127

Query: 145 APASPPPQLHSHNYSPQSHSYYSQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYART 204
           +               Q + Y                      +  PV+G+  + +Y R 
Sbjct: 128 S---------------QRYMY---------------------RMPDPVMGVVCEMVYRRL 187

Query: 205 FGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           FG +++N+  Y        + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 188 FGESSSNMAPY-------RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of PI0003746 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 31  SDADDGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQQCQQAECRCPV 90
           +D ++  S  F+CNICLD  QDP+VTLCGHLFCWPC+YKWLH    S          CPV
Sbjct: 11  NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD--------CPV 70

Query: 91  CKAKVSHATLVPIYGKFQTTDASKAKAPSDRGPAIPRRPLGRHVCEAEAPASPPPQLHSH 150
           CKA +    LVP+YG+ +++   ++K  S  G  +P RP G+    A+ P       H H
Sbjct: 71  CKAVIEEDRLVPLYGRGKSSADPRSK--SIPGLEVPNRPSGQRPETAQPPDPNHGFAHHH 122

Query: 151 NY 153
            +
Sbjct: 131 GF 122

The following BLAST results are available for this feature:

BLAST of PI0003746 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	2.1e-52	45.14	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	8.1e-44	45.70	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	1.4e-35	40.18	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	3.9e-30	37.18	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
O35445	2.3e-14	39.18	E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1	[more]

BLAST of PI0003746 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB39	8.2e-132	92.46	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 P...	[more]
A0A1S3BJB6	7.2e-128	91.27	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 ...	[more]
A0A5A7V6F7	1.2e-109	90.00	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CHP4	2.0e-101	76.38	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1FXR1	8.9e-94	78.57	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of PI0003746 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139942.1	1.7e-131	92.46	E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquiti...	[more]
XP_008448288.1	1.5e-127	91.27	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PRE...	[more]
XP_038901529.1	5.3e-117	86.17	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]	[more]
KAA0062066.1	2.4e-109	90.00	E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubi...	[more]
XP_022140292.1	4.1e-101	76.38	E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3...	[more]

BLAST of PI0003746 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	5.8e-45	45.70	RING membrane-anchor 1	[more]
AT4G03510.2	5.8e-45	45.70	RING membrane-anchor 1	[more]
AT4G27470.1	9.9e-37	40.18	RING membrane-anchor 3	[more]
AT4G28270.1	2.8e-31	37.18	RING membrane-anchor 2	[more]
AT1G19310.1	2.4e-22	42.62	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..91 e-value: 3.5E-7 score: 39.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 43..92 score: 12.622055
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 24..105 e-value: 3.6E-16 score: 60.3
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 43..89 e-value: 5.5E-7 score: 29.5
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 1..252
None	No IPR available	PANTHER	PTHR12313:SF75	SUBFAMILY NOT NAMED	coord: 1..252
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 41..93 e-value: 2.64535E-22 score: 84.6632
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 39..105
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003746.1	PI0003746.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity