PI0003720 (gene) Melon (PI 482460) v1

Overview


Name	PI0003720
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	basic leucine zipper 19-like
Location	chr12: 24433408 .. 24433770 (+)
RNA-Seq Expression	PI0003720
Synteny	PI0003720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTATAATTTGCTTCAAAATCAAAACCATCCTCCATGCAACTTCCAGGAGATAATGGAACTGTGTTCGGTAACTGTTTCTTCTACTCCGCCGGTTACGATCGGTCCTGACCACCGTCGTTTAGTCGTCAACAATTCGGTCTCGGACTGGCGGAGATCCTTCGTGGTTGGTTGCTCGAGGGAAGATGAAGAAAGGAGGAGGCCGGCAGTGCCGCTGGCTCCTTATGGCGCTGGAGAAATGAGCTCTGGTGGCGACGGGTCGGGGAATGTTGACGGCAGAAATTCGGAGCAGATCTTGTATGGTCGTAATATTGACCCTAATATGGATCCAAGGAAACTCAAACGGTTTGAACCCTAA

mRNA sequence

ATGGAAGATTATAATTTGCTTCAAAATCAAAACCATCCTCCATGCAACTTCCAGGAGATAATGGAACTGTGTTCGGTAACTGTTTCTTCTACTCCGCCGGTTACGATCGGTCCTGACCACCGTCGTTTAGTCGTCAACAATTCGGTCTCGGACTGGCGGAGATCCTTCGTGGTTGGTTGCTCGAGGGAAGATGAAGAAAGGAGGAGGCCGGCAGTGCCGCTGGCTCCTTATGGCGCTGGAGAAATGAGCTCTGGTGGCGACGGGTCGGGGAATGTTGACGGCAGAAATTCGGAGCAGATCTTGTATGGTCGTAATATTGACCCTAATATGGATCCAAGGAAACTCAAACGGTTTGAACCCTAA

Coding sequence (CDS)

ATGGAAGATTATAATTTGCTTCAAAATCAAAACCATCCTCCATGCAACTTCCAGGAGATAATGGAACTGTGTTCGGTAACTGTTTCTTCTACTCCGCCGGTTACGATCGGTCCTGACCACCGTCGTTTAGTCGTCAACAATTCGGTCTCGGACTGGCGGAGATCCTTCGTGGTTGGTTGCTCGAGGGAAGATGAAGAAAGGAGGAGGCCGGCAGTGCCGCTGGCTCCTTATGGCGCTGGAGAAATGAGCTCTGGTGGCGACGGGTCGGGGAATGTTGACGGCAGAAATTCGGAGCAGATCTTGTATGGTCGTAATATTGACCCTAATATGGATCCAAGGAAACTCAAACGGTTTGAACCCTAA

Protein sequence

MEDYNLLQNQNHPPCNFQEIMELCSVTVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGCSREDEERRRPAVPLAPYGAGEMSSGGDGSGNVDGRNSEQILYGRNIDPNMDPRKLKRFEP

Homology

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BLAST of PI0003720 vs. ExPASy TrEMBL
Match: A0A5A7UY89 (Basic leucine zipper 34-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00750 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSV-TVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVG 60
           MEDYNLLQNQNHPPCNFQ+IMELCSV T S+TPPVTI PD+R LVVNNSVSDWRRSFV+G
Sbjct: 1   MEDYNLLQNQNHPPCNFQDIMELCSVSTYSTTPPVTIRPDNRCLVVNNSVSDWRRSFVIG 60

Query: 61  CSREDEERRRPAVPLAPYGAGEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKRF 120
           CSREDEERRRP VPLAP+GAGEMSSGGDG GNVDGR NSEQILYGRNIDPNMDPRKLKRF
Sbjct: 61  CSREDEERRRPTVPLAPFGAGEMSSGGDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKRF 120

[Close]

BLAST of PI0003720 vs. ExPASy TrEMBL
Match: A0A0A0LXP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533410 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 105/123 (85.37%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSV-TVSSTPPVTIGPDHRRLVV-NNSVSDWRRSFVV 60
           MEDY+LLQNQNHPPCNFQ++MELCSV T+S+TPPVTI PD+RRLV+ NNSVSDWRRSFV+
Sbjct: 1   MEDYHLLQNQNHPPCNFQDLMELCSVSTISTTPPVTIVPDNRRLVINNNSVSDWRRSFVI 60

Query: 61  GCSREDEERRRPAVPLAPYGAGEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKR 120
           GCSRED+ERRRPAVPL P+GAGE+SS GDG GNVDGR NSEQILYGRNIDPNMDPRKLKR
Sbjct: 61  GCSREDDERRRPAVPLPPFGAGELSS-GDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKR 120

[Close]

BLAST of PI0003720 vs. ExPASy TrEMBL
Match: A0A1S3C5D9 (basic leucine zipper 34-like OS=Cucumis melo OX=3656 GN=LOC103497225 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 21  MELCSV-TVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGCSREDEERRRPAVPLAPYGA 80
           MELCSV T S+TPPVTI PD+R LVVNNSVSDWRRSFV+GCSREDEERRRP VPLAP+GA
Sbjct: 1   MELCSVSTYSTTPPVTIRPDNRCLVVNNSVSDWRRSFVIGCSREDEERRRPTVPLAPFGA 60

Query: 81  GEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKR 118
           GEMSSGGDG GNVDGR NSEQILYGRNIDPNMDPRKLKR
Sbjct: 61  GEMSSGGDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKR 99

[Close]

BLAST of PI0003720 vs. ExPASy TrEMBL
Match: A0A6J1KFV5 (basic leucine zipper 19-like OS=Cucurbita maxima OX=3661 GN=LOC111492853 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 73/127 (57.48%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSVTVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGC 60
           MEDYNL   QNH PCNFQ IME+CS TVS++P    G D RR++ +NSVS WRRSFVVG 
Sbjct: 1   MEDYNL--EQNHHPCNFQGIMEMCSATVSNSPS-NGGSDDRRVMYDNSVSAWRRSFVVGS 60

Query: 61  SRE---------DEERRRPAVPLAPYGAGEMSSGGDGSGNV-DGRNSEQILYGRNIDPNM 118
             E         D          +  G GEMSS  DG GNV DG NSEQIL+GR++DPNM
Sbjct: 61  QDEAASGGGKVADGRWSNGLSRFSKIGGGEMSS-SDGKGNVGDGGNSEQILFGRSVDPNM 120

[Close]

BLAST of PI0003720 vs. ExPASy TrEMBL
Match: A0A6J1GC75 (basic leucine zipper 19-like OS=Cucurbita moschata OX=3662 GN=LOC111452635 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.0e-24
Identity = 72/127 (56.69%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSVTVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGC 60
           MEDYNL   +NH PCNFQ IME+CS TVS++P    G D RR++ +NSVS WRRSFVVG 
Sbjct: 1   MEDYNL--EKNHHPCNFQGIMEMCSATVSNSPS-NGGADDRRVMNDNSVSAWRRSFVVGS 60

Query: 61  SRE---------DEERRRPAVPLAPYGAGEMSSGGDGSGNV-DGRNSEQILYGRNIDPNM 118
             E         D          +  G GEMSS  DG GNV DG NSEQIL+GR++DPNM
Sbjct: 61  QDEAASSGAKVADGRWSNGLSRFSKIGGGEMSS-SDGKGNVGDGGNSEQILFGRSVDPNM 120

[Close]

BLAST of PI0003720 vs. NCBI nr
Match: KAA0060024.1 (basic leucine zipper 34-like [Cucumis melo var. makuwa] >TYJ97281.1 basic leucine zipper 34-like [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 6.1e-55
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSV-TVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVG 60
           MEDYNLLQNQNHPPCNFQ+IMELCSV T S+TPPVTI PD+R LVVNNSVSDWRRSFV+G
Sbjct: 1   MEDYNLLQNQNHPPCNFQDIMELCSVSTYSTTPPVTIRPDNRCLVVNNSVSDWRRSFVIG 60

Query: 61  CSREDEERRRPAVPLAPYGAGEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKRF 120
           CSREDEERRRP VPLAP+GAGEMSSGGDG GNVDGR NSEQILYGRNIDPNMDPRKLKRF
Sbjct: 61  CSREDEERRRPTVPLAPFGAGEMSSGGDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKRF 120

[Close]

BLAST of PI0003720 vs. NCBI nr
Match: KAE8653289.1 (hypothetical protein Csa_023232, partial [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 6.6e-49
Identity = 102/120 (85.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSV-TVSSTPPVTIGPDHRRLVV-NNSVSDWRRSFVV 60
           MEDY+LLQNQNHPPCNFQ++MELCSV T+S+TPPVTI PD+RRLV+ NNSVSDWRRSFV+
Sbjct: 1   MEDYHLLQNQNHPPCNFQDLMELCSVSTISTTPPVTIVPDNRRLVINNNSVSDWRRSFVI 60

Query: 61  GCSREDEERRRPAVPLAPYGAGEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKR 118
           GCSRED+ERRRPAVPL P+GAGE+SS GDG GNVDGR NSEQILYGRNIDPNMDPRKLKR
Sbjct: 61  GCSREDDERRRPAVPLPPFGAGELSS-GDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKR 119

[Close]

BLAST of PI0003720 vs. NCBI nr
Match: XP_008457560.1 (PREDICTED: basic leucine zipper 34-like [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 7.3e-40
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 21  MELCSV-TVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGCSREDEERRRPAVPLAPYGA 80
           MELCSV T S+TPPVTI PD+R LVVNNSVSDWRRSFV+GCSREDEERRRP VPLAP+GA
Sbjct: 1   MELCSVSTYSTTPPVTIRPDNRCLVVNNSVSDWRRSFVIGCSREDEERRRPTVPLAPFGA 60

Query: 81  GEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKR 118
           GEMSSGGDG GNVDGR NSEQILYGRNIDPNMDPRKLKR
Sbjct: 61  GEMSSGGDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKR 99

[Close]

BLAST of PI0003720 vs. NCBI nr
Match: XP_011648516.1 (basic leucine zipper 34 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 7.5e-37
Identity = 85/100 (85.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 21  MELCSV-TVSSTPPVTIGPDHRRLVV-NNSVSDWRRSFVVGCSREDEERRRPAVPLAPYG 80
           MELCSV T+S+TPPVTI PD+RRLV+ NNSVSDWRRSFV+GCSRED+ERRRPAVPL P+G
Sbjct: 1   MELCSVSTISTTPPVTIVPDNRRLVINNNSVSDWRRSFVIGCSREDDERRRPAVPLPPFG 60

Query: 81  AGEMSSGGDGSGNVDGR-NSEQILYGRNIDPNMDPRKLKR 118
           AGE+SS GDG GNVDGR NSEQILYGRNIDPNMDPRKLKR
Sbjct: 61  AGELSS-GDGLGNVDGRNNSEQILYGRNIDPNMDPRKLKR 99

[Close]

BLAST of PI0003720 vs. NCBI nr
Match: XP_022998103.1 (basic leucine zipper 19-like [Cucurbita maxima])

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-24
Identity = 73/127 (57.48%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 1   MEDYNLLQNQNHPPCNFQEIMELCSVTVSSTPPVTIGPDHRRLVVNNSVSDWRRSFVVGC 60
           MEDYNL   QNH PCNFQ IME+CS TVS++P    G D RR++ +NSVS WRRSFVVG 
Sbjct: 1   MEDYNL--EQNHHPCNFQGIMEMCSATVSNSPS-NGGSDDRRVMYDNSVSAWRRSFVVGS 60

Query: 61  SRE---------DEERRRPAVPLAPYGAGEMSSGGDGSGNV-DGRNSEQILYGRNIDPNM 118
             E         D          +  G GEMSS  DG GNV DG NSEQIL+GR++DPNM
Sbjct: 61  QDEAASGGGKVADGRWSNGLSRFSKIGGGEMSS-SDGKGNVGDGGNSEQILFGRSVDPNM 120

The following BLAST results are available for this feature:

BLAST of PI0003720 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY89	3.0e-55	90.16	Basic leucine zipper 34-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LXP6	2.0e-51	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533410 PE=4 SV=1	[more]
A0A1S3C5D9	3.5e-40	88.89	basic leucine zipper 34-like OS=Cucumis melo OX=3656 GN=LOC103497225 PE=4 SV=1	[more]
A0A6J1KFV5	1.2e-24	57.48	basic leucine zipper 19-like OS=Cucurbita maxima OX=3661 GN=LOC111492853 PE=4 SV...	[more]
A0A6J1GC75	6.0e-24	56.69	basic leucine zipper 19-like OS=Cucurbita moschata OX=3662 GN=LOC111452635 PE=4 ...	[more]

BLAST of PI0003720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060024.1	6.1e-55	90.16	basic leucine zipper 34-like [Cucumis melo var. makuwa] >TYJ97281.1 basic leucin...	[more]
KAE8653289.1	6.6e-49	85.00	hypothetical protein Csa_023232, partial [Cucumis sativus]	[more]
XP_008457560.1	7.3e-40	88.89	PREDICTED: basic leucine zipper 34-like [Cucumis melo]	[more]
XP_011648516.1	7.5e-37	85.00	basic leucine zipper 34 [Cucumis sativus]	[more]
XP_022998103.1	2.5e-24	57.48	basic leucine zipper 19-like [Cucurbita maxima]	[more]

BLAST of PI0003720 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003720.1	PI0003720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity