PI0003679 (gene) Melon (PI 482460) v1

Overview


Name	PI0003679
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-H2 finger protein ATL5-like
Location	chr11: 98624 .. 99564 (+)
RNA-Seq Expression	PI0003679
Synteny	PI0003679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGTTCTGGTATGAACTTGATTACCACTGTTATTGGGTTTGGAATGAGTGCTACATTCATAGTGTTCGTCTGTACAAGAATCATTTGTGGTCGACTTCGTTCAGCTCAATCCAATACCCCCAATTATGAGATTGAATCCAGGCTTGATCTTGAGCAGCAGGTAAGAAATACTCTCATCTCTCTTAATCTGGATCTGCACACTGTTTCTATTTACTTCTAAATCATGAATCCCATTGGTTAATCACCACAGTGGAGTGATGTAGCCAAGGATTGGAATGGTACCATCGTCTTAGGCATCTATATGTCAAAATGACGAGCCTCTTGGTTCTTTATGTTGTTTGATACCAGCCAGAGTCCCGGGCGAGTGGTCTCGAACCGATTCTCATAGCTGCTATACCAACAATGAAGTTCGATCGAGAGGCTTTCAGTTCTGTAGAAGATGCTCAGTGAGTACAACTTTCAATTCATTAGCATATCAGCTGCAGAAGCATAGATAATTAGGATTACAGTTTTATAGAAGATGTTCAGTTACTGATAGATAGATAACCTGACCCACTAAACTATGGTTCATTGTGCTCCACTTTCAGATGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACATGCATTGATGTATGGTTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCACTGCAAGACTCCTTCAGAACAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACACTGGCTTCTACCTGGCCCCAACCGTTCGGAGGGCAACACAAGCAACCAAGCACAGCTTCAACCCATTCCAGTAAACCCCTCAGCTCAAAGAGAGATGGAAACAATACAATGA

mRNA sequence

ATGACGGGTTCTGGTATGAACTTGATTACCACTGTTATTGGGTTTGGAATGAGTGCTACATTCATAGTGTTCGTCTGTACAAGAATCATTTGTGGTCGACTTCGTTCAGCTCAATCCAATACCCCCAATTATGAGATTGAATCCAGGCTTGATCTTGAGCAGCAGCCAGAGTCCCGGGCGAGTGGTCTCGAACCGATTCTCATAGCTGCTATACCAACAATGAAGTTCGATCGAGAGGCTTTCAGTTCTGTAGAAGATGCTCAATGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACATGCATTGATGTATGGTTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCACTGCAAGACTCCTTCAGAACAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACACTGGCTTCTACCTGGCCCCAACCGTTCGGAGGGCAACACAAGCAACCAAGCACAGCTTCAACCCATTCCAGTAAACCCCTCAGCTCAAAGAGAGATGGAAACAATACAATGA

Coding sequence (CDS)

ATGACGGGTTCTGGTATGAACTTGATTACCACTGTTATTGGGTTTGGAATGAGTGCTACATTCATAGTGTTCGTCTGTACAAGAATCATTTGTGGTCGACTTCGTTCAGCTCAATCCAATACCCCCAATTATGAGATTGAATCCAGGCTTGATCTTGAGCAGCAGCCAGAGTCCCGGGCGAGTGGTCTCGAACCGATTCTCATAGCTGCTATACCAACAATGAAGTTCGATCGAGAGGCTTTCAGTTCTGTAGAAGATGCTCAATGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACATGCATTGATGTATGGTTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCACTGCAAGACTCCTTCAGAACAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACACTGGCTTCTACCTGGCCCCAACCGTTCGGAGGGCAACACAAGCAACCAAGCACAGCTTCAACCCATTCCAGTAAACCCCTCAGCTCAAAGAGAGATGGAAACAATACAATGA

Protein sequence

MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNTSNQAQLQPIPVNPSAQREMETIQ

Homology

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BLAST of PI0003679 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-16
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 55  QPESRASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHL 114
           Q  S  S L+P ++  IP   +  +   S  + +CS+CL E+EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 TCIDVWLRKQSTCPVCRLPLQDSFRTKPARPMT 148
            CID W R +S+CP+CR P+Q      PA+P+T
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVT 165

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BLAST of PI0003679 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-16
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 8   LITTVIGFGMSATFIVFVCTRI--ICGR---LRSAQSNTPNYEIESRLDLEQQPESRASG 67
           L+  +IG   SA  +V   T I   C R     S+++   N+  E      Q+  +   G
Sbjct: 57  LLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDG 116

Query: 68  LEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLR 127
           L   +I +I   K+ +     V+ + CS+CL E+EE E LR++PKC H+FHL CID WL+
Sbjct: 117 LNESMIKSITVYKY-KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 176

Query: 128 KQSTCPVCR 132
             S CP+CR
Sbjct: 177 SHSNCPLCR 184

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BLAST of PI0003679 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-16
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 62  GLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWL 121
           GL   +   +P + + +E+F  V+D+QCS+CLG+Y+ +E L+ MP CGH+FH+ CID+WL
Sbjct: 86  GLSKDIREMLPVVIY-KESF-IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 145

Query: 122 RKQSTCPVCRLPL--QDSFRTKPARPMTVSRDQSFDGSEISTDHHSQ 167
              +TCP+CRL L  + S          VS  ++ +G E ST   SQ
Sbjct: 146 TSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQ 190

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BLAST of PI0003679 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 85  EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQDSFR 140
           E  +CS+CL E+EE++  R++PKCGHSFH+ CID W R +STCP+CR P+Q  F+
Sbjct: 104 EKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQ 158

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BLAST of PI0003679 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 78  REAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPL--Q 137
           +E+F +V D QCS+CLG+Y+ +E L+ MP CGH+FH+ CID+WL   +TCP+CRL L  +
Sbjct: 87  KESF-TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPK 146

Query: 138 DSFRTKPARPMTVSRDQSFDGSEISTDHHSQ 167
            S          VS  ++ +G E ST   SQ
Sbjct: 147 PSVDLSHQSIEIVSSIENTNGGEASTQPDSQ 176

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BLAST of PI0003679 vs. ExPASy TrEMBL
Match: A0A0A0K9N8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.5e-110
Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPTM FDREAFSS+EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+QLQPIPVNP+AQREMETIQ
Sbjct: 181 SNQSQLQPIPVNPAAQREMETIQ 203

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BLAST of PI0003679 vs. ExPASy TrEMBL
Match: A0A5A7TEE5 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G003170 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+QLQPIPVNPSAQREMETIQ
Sbjct: 181 SNQSQLQPIPVNPSAQREMETIQ 203

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BLAST of PI0003679 vs. ExPASy TrEMBL
Match: A0A1S3CBG3 (RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+QLQPIPVNPSAQREMETIQ
Sbjct: 181 SNQSQLQPIPVNPSAQREMETIQ 203

[Close]

BLAST of PI0003679 vs. ExPASy TrEMBL
Match: A0A5D3DMH5 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00110 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106
Identity = 196/211 (92.89%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQ----- 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQ     
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQYSGVA 60

Query: 61  ---PESRASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSF 120
               ESRASGLEP+LIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSF
Sbjct: 61  KDWKESRASGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSF 120

Query: 121 HLTCIDVWLRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180
           HLTCIDVWLRKQSTCP+CRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG
Sbjct: 121 HLTCIDVWLRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180

Query: 181 PNRSEGNTSNQAQLQPIPVNPSAQREMETIQ 204
           PNRSEGNTSNQ+QLQPIPVNPSAQREMETIQ
Sbjct: 181 PNRSEGNTSNQSQLQPIPVNPSAQREMETIQ 211

[Close]

BLAST of PI0003679 vs. ExPASy TrEMBL
Match: A0A6J1H6L8 (RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111460093 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100
Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMN ITTV+GFGMSATFIVF+CTRIICGRLRS+QSN  NYEIESR+DLEQQPESRA
Sbjct: 1   MTGSGMNFITTVVGFGMSATFIVFICTRIICGRLRSSQSNRLNYEIESRVDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPTMKF+REAF+SVEDAQCSICLGEYEEKEVLR+MPKCGH FH +CIDVW
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFNSVEDAQCSICLGEYEEKEVLRMMPKCGHRFHRSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDS  TKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSSTTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ QL+ +PVNPS QRE+ETI+
Sbjct: 181 SNQTQLESVPVNPSVQREIETIR 203

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BLAST of PI0003679 vs. NCBI nr
Match: XP_004153610.1 (RING-H2 finger protein ATL5 [Cucumis sativus] >KGN46203.1 hypothetical protein Csa_004984 [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-109
Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPTM FDREAFSS+EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+QLQPIPVNP+AQREMETIQ
Sbjct: 181 SNQSQLQPIPVNPAAQREMETIQ 203

[Close]

BLAST of PI0003679 vs. NCBI nr
Match: XP_008460164.1 (PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0040031.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109
Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+QLQPIPVNPSAQREMETIQ
Sbjct: 181 SNQSQLQPIPVNPSAQREMETIQ 203

[Close]

BLAST of PI0003679 vs. NCBI nr
Match: XP_038876418.1 (RING-H2 finger protein ATL72-like [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.3e-107
Identity = 193/203 (95.07%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQS+TP+YEIESR+DLEQQPESRA
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSSTPSYEIESRVDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+ IAAIPT KFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVFIAAIPTTKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ+ LQPIPVNPS QREMET+Q
Sbjct: 181 SNQSHLQPIPVNPSVQREMETVQ 203

[Close]

BLAST of PI0003679 vs. NCBI nr
Match: TYK24470.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.4 bits (1012), Expect = 5.8e-106
Identity = 196/211 (92.89%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQ----- 60
           MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQ     
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQYSGVA 60

Query: 61  ---PESRASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSF 120
               ESRASGLEP+LIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSF
Sbjct: 61  KDWKESRASGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSF 120

Query: 121 HLTCIDVWLRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180
           HLTCIDVWLRKQSTCP+CRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG
Sbjct: 121 HLTCIDVWLRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180

Query: 181 PNRSEGNTSNQAQLQPIPVNPSAQREMETIQ 204
           PNRSEGNTSNQ+QLQPIPVNPSAQREMETIQ
Sbjct: 181 PNRSEGNTSNQSQLQPIPVNPSAQREMETIQ 211

[Close]

BLAST of PI0003679 vs. NCBI nr
Match: XP_022958959.1 (RING-H2 finger protein ATL7-like [Cucurbita moschata] >KAG6574779.1 RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013359.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.4 bits (960), Expect = 6.2e-100
Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60
           MTGSGMN ITTV+GFGMSATFIVF+CTRIICGRLRS+QSN  NYEIESR+DLEQQPESRA
Sbjct: 1   MTGSGMNFITTVVGFGMSATFIVFICTRIICGRLRSSQSNRLNYEIESRVDLEQQPESRA 60

Query: 61  SGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEP+LIAAIPTMKF+REAF+SVEDAQCSICLGEYEEKEVLR+MPKCGH FH +CIDVW
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFNSVEDAQCSICLGEYEEKEVLRMMPKCGHRFHRSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDS  TKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSSTTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLQPIPVNPSAQREMETIQ 204
           SNQ QL+ +PVNPS QRE+ETI+
Sbjct: 181 SNQTQLESVPVNPSVQREIETIR 203

[Close]

BLAST of PI0003679 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 59  RASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCID 118
           R  GL P +I++I   ++ ++    VE   CS+CL E+EE+E LR++PKC H+FHL CID
Sbjct: 188 RTIGLNPTVISSIKVCQYSKKD-GVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCID 247

Query: 119 VWLRKQSTCPVCRLPLQDS 138
            WLR  + CP+CR P+ ++
Sbjct: 248 TWLRSHTNCPLCRAPIVEA 265

[Close]

BLAST of PI0003679 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 55  QPESRASGLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHL 114
           Q  S  S L+P ++  IP   +  +   S  + +CS+CL E+EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 TCIDVWLRKQSTCPVCRLPLQDSFRTKPARPMT 148
            CID W R +S+CP+CR P+Q      PA+P+T
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVT 165

[Close]

BLAST of PI0003679 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.1e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 62  GLEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWL 121
           GL   +   +P + + +E+F  V+D+QCS+CLG+Y+ +E L+ MP CGH+FH+ CID+WL
Sbjct: 86  GLSKDIREMLPVVIY-KESF-IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 145

Query: 122 RKQSTCPVCRLPL--QDSFRTKPARPMTVSRDQSFDGSEISTDHHSQ 167
              +TCP+CRL L  + S          VS  ++ +G E ST   SQ
Sbjct: 146 TSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQ 190

[Close]

BLAST of PI0003679 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.1e-17
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 8   LITTVIGFGMSATFIVFVCTRI--ICGR---LRSAQSNTPNYEIESRLDLEQQPESRASG 67
           L+  +IG   SA  +V   T I   C R     S+++   N+  E      Q+  +   G
Sbjct: 57  LLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDG 116

Query: 68  LEPILIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLR 127
           L   +I +I   K+ +     V+ + CS+CL E+EE E LR++PKC H+FHL CID WL+
Sbjct: 117 LNESMIKSITVYKY-KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 176

Query: 128 KQSTCPVCR 132
             S CP+CR
Sbjct: 177 SHSNCPLCR 184

[Close]

BLAST of PI0003679 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-17
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 85  EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQDSFR 140
           E  +CS+CL E+EE++  R++PKCGHSFH+ CID W R +STCP+CR P+Q  F+
Sbjct: 104 EKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQ 158

The following BLAST results are available for this feature:

BLAST of PI0003679 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZJ6	2.6e-16	41.94	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9LF64	5.8e-16	36.43	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SN28	5.8e-16	41.12	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
O22255	1.3e-15	56.36	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9SN27	1.7e-15	45.05	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]

BLAST of PI0003679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9N8	5.5e-110	97.54	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 P...	[more]
A0A5A7TEE5	2.1e-109	97.04	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3CBG3	2.1e-109	97.04	RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV...	[more]
A0A5D3DMH5	2.8e-106	92.89	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1H6L8	3.0e-100	88.18	RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111460093 P...	[more]

BLAST of PI0003679 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153610.1	1.1e-109	97.54	RING-H2 finger protein ATL5 [Cucumis sativus] >KGN46203.1 hypothetical protein C...	[more]
XP_008460164.1	4.3e-109	97.04	PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0040031.1 RING-H2...	[more]
XP_038876418.1	5.3e-107	95.07	RING-H2 finger protein ATL72-like [Benincasa hispida]	[more]
TYK24470.1	5.8e-106	92.89	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]
XP_022958959.1	6.2e-100	88.18	RING-H2 finger protein ATL7-like [Cucurbita moschata] >KAG6574779.1 RING-H2 fing...	[more]

BLAST of PI0003679 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	2.2e-18	45.57	RING/U-box superfamily protein	[more]
AT3G62690.1	1.8e-17	41.94	AtL5	[more]
AT4G10150.1	4.1e-17	41.12	RING/U-box superfamily protein	[more]
AT5G17600.1	4.1e-17	36.43	RING/U-box superfamily protein	[more]
AT2G47560.1	9.2e-17	56.36	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 89..130 e-value: 8.0E-9 score: 45.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 88..131 e-value: 1.3E-14 score: 54.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 89..131 score: 13.079398
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..140 e-value: 3.1E-22 score: 79.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..203
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..193
None	No IPR available	PANTHER	PTHR47035:SF4	OS02G0676500 PROTEIN	coord: 1..193
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 88..131 e-value: 2.73558E-17 score: 70.4167
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 80..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003679.1	PI0003679.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane