PI0003601 (gene) Melon (PI 482460) v1

Overview
NamePI0003601
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPolyprotein
Locationchr11: 21859358 .. 21859736 (-)
RNA-Seq ExpressionPI0003601
SyntenyPI0003601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTTGCTGGAGTTTCAACACAACTTCATATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGACAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA

mRNA sequence

ATGGATATTTTGCTGGAGTTTCAACACAACTTCATATCCACAATACAAGATCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGACAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA

Coding sequence (CDS)

ATGGATATTTTGCTGGAGTTTCAACACAACTTCATATCCACAATACAAGATCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGACAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA

Protein sequence

MDILLEFQHNFISTIQDHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM
Homology
BLAST of PI0003601 vs. ExPASy TrEMBL
Match: A0A5A7SNT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001890 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.1e-31
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNAST 77
           HATIKH+KEWF ENGYLQDIDQ KN +FLN+KSKLLA LAQ TTDADFQRLL T VNAST
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSASSSIQEDDELASPEYDLNDPFLDSQPM 110
           SSKS SS +QED+E   PEYDL++PFLDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of PI0003601 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNAST 77
           HATIKH+KEWFAEN YLQDIDQ+KN EFLNDKSKLL ALAQ TTDADFQRLLSTAVNAS+
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSASSSIQEDDELASPEYDLNDPFLDSQPM 110
           SSKS SSSIQED+E   PEYDL+D  LDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

BLAST of PI0003601 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.8e-20
Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 0

Query: 28  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNASTSSKSASSSIQ 87
           + +NG LQDIDQ+KNA+FLNDK K LAAL Q T DADFQRLLSTAVN S+SSK A S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDDELASPEYDLNDPFLDSQP 109
           ED+E    EYDL+DPFLDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of PI0003601 vs. ExPASy TrEMBL
Match: A0A0A0KYU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0

Query: 15 IQDHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLST 72
          I++HATIKHMKEWFAEN YLQDIDQ+KN EFLNDKSKLLA LAQ TTD +FQRLLST
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 74

BLAST of PI0003601 vs. ExPASy TrEMBL
Match: A0A5A7UZX0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADF 66
           HATIKH+KEWFA+NGYLQDIDQ+KN EFLNDKSKLLAALAQ TTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

BLAST of PI0003601 vs. NCBI nr
Match: KAA0025901.1 (hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNAST 77
           HATIKH+KEWF ENGYLQDIDQ KN +FLN+KSKLLA LAQ TTDADFQRLL T VNAST
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSASSSIQEDDELASPEYDLNDPFLDSQPM 110
           SSKS SS +QED+E   PEYDL++PFLDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of PI0003601 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30
Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNAST 77
           HATIKH+KEWFAEN YLQDIDQ+KN EFLNDKSKLL ALAQ TTDADFQRLLSTAVNAS+
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSASSSIQEDDELASPEYDLNDPFLDSQPM 110
           SSKS SSSIQED+E   PEYDL+D  LDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

BLAST of PI0003601 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 5.8e-20
Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 0

Query: 28  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLSTAVNASTSSKSASSSIQ 87
           + +NG LQDIDQ+KNA+FLNDK K LAAL Q T DADFQRLLSTAVN S+SSK A S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDDELASPEYDLNDPFLDSQP 109
           ED+E    EYDL+DPFLDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of PI0003601 vs. NCBI nr
Match: XP_031739746.1 (uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetical protein Csa_012459 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 2.7e-17
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0

Query: 15 IQDHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADFQRLLST 72
          I++HATIKHMKEWFAEN YLQDIDQ+KN EFLNDKSKLLA LAQ TTD +FQRLLST
Sbjct: 25 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 81

BLAST of PI0003601 vs. NCBI nr
Match: KAA0059031.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0

Query: 18  HATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQTTTDADF 66
           HATIKH+KEWFA+NGYLQDIDQ+KN EFLNDKSKLLAALAQ TTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SNT56.1e-3179.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SWC01.0e-3083.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BI612.8e-2072.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYU01.3e-1784.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1[more]
A0A5A7UZX02.1e-1589.58Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE... [more]
Match NameE-valueIdentityDescription
KAA0025901.11.3e-3079.35hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa][more]
KAA0034823.12.1e-3083.70hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa][more]
TYJ98361.15.8e-2072.84hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa][more]
XP_031739746.12.7e-1784.21uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetica... [more]
KAA0059031.14.3e-1589.58polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003601.1PI0003601.1mRNA