PI0003569 (gene) Melon (PI 482460) v1

Overview


Name	PI0003569
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr03: 15721977 .. 15723443 (-)
RNA-Seq Expression	PI0003569
Synteny	PI0003569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAATATGACTACTCTACTAACCTCTTTTGTCCAAGGTGGAAATGTGAAAGTTGCGAAATGTGGAGTATGTGGACTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCTCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTCCTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGTAAAAGTAAAATTTCTGATTTTACCCCTTTTGTTCCTAACGCTCCTTTTCCTTCCAGATTAGTTCCTAAAAAGAAAGAAACACCGAAGGAAGAAGAACTGTTGGAGATGTTTAGGAAAGTGCAAATAAACCTACCTCTACTCGACGCAATTCAACAAGTCCCGAGGTATGCAAGTTCTTAAAAGAGTTATGCACAAACAAAAGAAAAATCAAGGAGAAGCAATGGTAAGTCACAACGTTTCTGCCTTACTTAAAACTTCAATTCCTGCGAAGCAAAACGACCCTGGTATGTTTTCTCTTCCTTGCATTATAGGAAATAGGCAAATTTCAAGTGCCATGTTAGATCTAGGAGCTTCTATTAATGTCATGTCGTATTCTGTTTTCAAAGATCTTGAATTAAATAATCTGCAAAAAACAAATGTATGCATTCAACTTGCTGATAGATCTTTCATAACACCTTTAGGAATAGTTGAAGATGTGTTAGTAAAAATTGACAAACTTATATTTCCCGCGGACTTTTATATTCTTGAAATGAATGATGCATGCATGAAACCCTCCCATTCAATTCTTCTAGGTAGACCTTTCCTTAAAACTGCCAAAGCTATCATAGATGTAGATAAAGGTTGCCTAAGTGTAGAATTCGATGGAGACATAGTGACATTCAATATTTTTGAATCCATGAAATTCCCTGATGAATGCTTCTCTGTATGCTCCTTGCAAATATATGAAAATTTTGAACAAATTCCTATAATAGAACAATTTGTTAATTTTGACTTAGAAGAAATAGAAGAAGACATTTGTTTGAATGAATTAAACAAAGAAGAAGAAATTGTAGAAGTAGAAAATGATGAAGAAATAAACTTTGAAGGAATAGATCCTAATTCAATTTCTTTTTCTCCACAGGAACCAGGGATTGA

mRNA sequence

ATGCTTAATATGACTACTCTACTAACCTCTTTTGTCCAAGGTGGAAATGTGAAAGTTGCGAAATGTGGAGTATGTGGACTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCTCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTCCTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGGATTGA

Coding sequence (CDS)

ATGCTTAATATGACTACTCTACTAACCTCTTTTGTCCAAGGTGGAAATGTGAAAGTTGCGAAATGTGGAGTATGTGGACTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCTCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTCCTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGAAGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGGATTGA

Protein sequence

MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEKVPSNPDLLIDENKKKEENKENNASSPSLKGTRD

Homology

[Close]

BLAST of PI0003569 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.3e-64
Identity = 129/187 (68.98%), Postives = 155/187 (82.89%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYD  GNTYN+GWR
Sbjct: 54  MLNMTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QLT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S 
Sbjct: 174 DGKGKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 234 SNSKNDK 240

[Close]

BLAST of PI0003569 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 127/187 (67.91%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YD  GNTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ +MKQQM+QLT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSS 232

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 233 SNSKNDK 239

[Close]

BLAST of PI0003569 vs. ExPASy TrEMBL
Match: A0A5A7T4R3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00210 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.0e-62
Identity = 128/187 (68.45%), Postives = 152/187 (81.28%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMT LLTSFVQG  +KV KCGVC L+GH NDKCP+++E+ N++RKYD  GNTYN+GWR
Sbjct: 54  MLNMTILLTSFVQGTPLKVTKCGVCRLVGHSNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT SFQ EMKQQM+QLT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTHSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S 
Sbjct: 174 DGKGKLPAQPDHANVSAISLRSGKILNTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 234 SNSKNDK 240

[Close]

BLAST of PI0003569 vs. ExPASy TrEMBL
Match: A0A5A7VE49 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00600 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.9e-61
Identity = 125/187 (66.84%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YD  GNTYN+GWR
Sbjct: 30  MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWR 89

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNP LRWGN+NQ+  QA  +S+NQGTNLED++KALA NT+SFQ EMKQQM+QLT AISK+
Sbjct: 90  DNPKLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKM 149

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQP+HANVSAISLRSGKIL  P + E+KV S    L  +N+ KEEN E N S 
Sbjct: 150 DGKGKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSP 209

Query: 181 PSLKGTR 187
            ++K  +
Sbjct: 210 SNIKNDK 216

[Close]

BLAST of PI0003569 vs. ExPASy TrEMBL
Match: A0A5A7V0L2 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00850 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 4   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWRDNP 63
           MTT LTSFVQG  +KV KCGVCGL+GH NDKCP ++E+ N++R+Y+LQGNTYN+GWRDNP
Sbjct: 1   MTTFLTSFVQGTPLKVTKCGVCGLVGHSNDKCPKVIEDVNIVRRYNLQGNTYNSGWRDNP 60

Query: 64  NLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 123
           NLRWGN+NQ+ TQA  +S+NQGTNL+D++KALATN +SFQ EMK+QM+Q+T AISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPSTSSNQGTNLKDIIKALATNNVSFQQEMKRQMTQITTAISKMDGK 120

Query: 124 GKLPAQPDHANVSAISLRSGKILQPPPSEE-KVPSNPDLLIDENKKKEENKENNASSPSL 183
           GKLPAQP+HANVSAISLRSGKIL  P +EE KV S P  L  +N+ KEE  E N SS + 
Sbjct: 121 GKLPAQPNHANVSAISLRSGKILDSPATEEKKVTSKPLPLNSKNEFKEEKVETNPSSSNS 180

Query: 184 KGTR 187
           K  +
Sbjct: 181 KNDK 184

[Close]

BLAST of PI0003569 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 129/187 (68.98%), Postives = 155/187 (82.89%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYD  GNTYN+GWR
Sbjct: 54  MLNMTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QLT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S 
Sbjct: 174 DGKGKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 234 SNSKNDK 240

[Close]

BLAST of PI0003569 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 5.6e-63
Identity = 127/187 (67.91%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YD  GNTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ +MKQQM+QLT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSS 232

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 233 SNSKNDK 239

[Close]

BLAST of PI0003569 vs. NCBI nr
Match: KAA0038454.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 6.2e-62
Identity = 128/187 (68.45%), Postives = 152/187 (81.28%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMT LLTSFVQG  +KV KCGVC L+GH NDKCP+++E+ N++RKYD  GNTYN+GWR
Sbjct: 54  MLNMTILLTSFVQGTPLKVTKCGVCRLVGHSNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT SFQ EMKQQM+QLT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTHSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S 
Sbjct: 174 DGKGKLPAQPDHANVSAISLRSGKILNTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 PSLKGTR 187
            + K  +
Sbjct: 234 SNSKNDK 240

[Close]

BLAST of PI0003569 vs. NCBI nr
Match: KAA0065554.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 4.0e-61
Identity = 125/187 (66.84%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YD  GNTYN+GWR
Sbjct: 30  MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWR 89

Query: 61  DNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKL 120
           DNP LRWGN+NQ+  QA  +S+NQGTNLED++KALA NT+SFQ EMKQQM+QLT AISK+
Sbjct: 90  DNPKLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKM 149

Query: 121 EGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASS 180
           +GKGKLPAQP+HANVSAISLRSGKIL  P + E+KV S    L  +N+ KEEN E N S 
Sbjct: 150 DGKGKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSP 209

Query: 181 PSLKGTR 187
            ++K  +
Sbjct: 210 SNIKNDK 216

[Close]

BLAST of PI0003569 vs. NCBI nr
Match: KAA0060347.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK22096.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 5.2e-61
Identity = 123/184 (66.85%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 4   MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDLQGNTYNAGWRDNP 63
           MTT LTSFVQG  +KV KCGVCGL+GH NDKCP ++E+ N++R+Y+LQGNTYN+GWRDNP
Sbjct: 1   MTTFLTSFVQGTPLKVTKCGVCGLVGHSNDKCPKVIEDVNIVRRYNLQGNTYNSGWRDNP 60

Query: 64  NLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 123
           NLRWGN+NQ+ TQA  +S+NQGTNL+D++KALATN +SFQ EMK+QM+Q+T AISK++GK
Sbjct: 61  NLRWGNDNQKHTQAPSTSSNQGTNLKDIIKALATNNVSFQQEMKRQMTQITTAISKMDGK 120

Query: 124 GKLPAQPDHANVSAISLRSGKILQPPPSEE-KVPSNPDLLIDENKKKEENKENNASSPSL 183
           GKLPAQP+HANVSAISLRSGKIL  P +EE KV S P  L  +N+ KEE  E N SS + 
Sbjct: 121 GKLPAQPNHANVSAISLRSGKILDSPATEEKKVTSKPLPLNSKNEFKEEKVETNPSSSNS 180

Query: 184 KGTR 187
           K  +
Sbjct: 181 KNDK 184

The following BLAST results are available for this feature:

BLAST of PI0003569 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBZ4	9.3e-64	68.98	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CQU8	2.7e-63	67.91	uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=...	[more]
A0A5A7T4R3	3.0e-62	68.45	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7VE49	1.9e-61	66.84	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7V0L2	2.5e-61	66.85	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of PI0003569 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33993.1	1.9e-63	68.98	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
XP_008465649.1	5.6e-63	67.91	PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]	[more]
KAA0038454.1	6.2e-62	68.45	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0065554.1	4.0e-61	66.84	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0060347.1	5.2e-61	66.85	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK22096.1 retrotranspos...	[more]

BLAST of PI0003569 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003569.1	PI0003569.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding