PI0003548 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGTCATTGTGATCGATCGTCTTCTAATTCTGCATTGTTCGTCATCTACTTGCTGCCCCCCTTTGCCATCATGAGTCCTACTCTCATCATTGCAATGGAAAAAACCCTCTTTTTCTCTCTCTTCTTCCTCAATTTCCTCTTCTATTTATACTCTCAATCCCCCATTATCCGCCATTGCTAACCATTTCTCCACCTTCATACCTCCTCAATCATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGTCGCCCCGTTCGAGTTTACAGCCTTTTGAGGTGATTCATTTTATTTCATTTCATTTTTATTCTGATTCTCTGTTATTTACAGAATTTTTATTATTTTTTATTTTTTGATTAATCGTTTCAGAAGGATGAGATTCGCAAAGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCGGTTGGGAAATTAAACAAAATCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAATCTTTGATAAATTTTCTTGCTACTGATTTTTTTTTTTTCGATTTTCCTACGATTCCTTGGTTTGTAATCTGTTATTTTGACAATAAATTAGGTTTTTGATTTTGAGGGGAAGGGAATAAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTCAGAATATAGTTTATTTGATGAAATATTATGAAGCAAAACTCTGTTAGTAGTTTGTACTGTTAAATTCGATCTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTAAAGAAGCTTGGTTGGTTTGATCTTGAAGCTGGAAAATGATTGGGTATTTTATCCTAAAACTTGAATCAAACAGGTGATACAAGGTTTTGGTTTTTTAAATATCATGAACCATTAGAAAAAAAAAATTTAAAAGTAAACCGTGAAAAAAATACAAATTTAGAAATTTAATTGATATAATTATAAGTTTATTTGTTAACAAAGAAAAGTTCGACATTTAAATTGAACTTAAATTGAACCCCGATTGTACTCGCCCTTCAAATTTATAAATATATGTGCGTGCCTGCGGCTTTCTCCTTGATTAAAGAAAACATTCACAAAGGATGTATTATACTAATGTATTATACCAAGAATTTGAAAACAAAATACAGTATGTCTATGTGTATGTATGTGTATGTGTATATATATAAAAGTAGGTTGAACAAAGCCCTATTTTGGTTTA GGTGTCATTGTGATCGATCGTCTTCTAATTCTGCATTGTTCGTCATCTACTTGCTGCCCCCCTTTGCCATCATGAGTCCTACTCTCATCATTGCAATGGAAAAAACCCTCTTTTTCTCTCTCTTCTTCCTCAATTTCCTCTTCTATTTATACTCTCAATCCCCCATTATCCGCCATTGCTAACCATTTCTCCACCTTCATACCTCCTCAATCATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGTCGCCCCGTTCGAGTTTACAGCCTTTTGAGAAGGATGAGATTCGCAAAGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCGGTTGGGAAATTAAACAAAATCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAATCTTTGATAAATTTTCTTGCTACTGATTTTTTTTTTTTCGATTTTCCTACGATTCCTTGGTTTGTAATCTGTTATTTTGACAATAAATTAGGTTTTTGATTTTGAGGGGAAGGGAATAAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTCAGAATATAGTTTATTTGATGAAATATTATGAAGCAAAACTCTGTTAGTAGTTTGTACTGTTAAATTCGATCTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTAAAGAAGCTTGGTTGGTTTGATCTTGAAGCTGGAAAATGATTGGGTATTTTATCCTAAAACTTGAATCAAACAGGTGATACAAGGTTTTGGTTTTTTAAATATCATGAACCATTAGAAAAAAAAAATTTAAAAGTAAACCGTGAAAAAAATACAAATTTAGAAATTTAATTGATATAATTATAAGTTTATTTGTTAACAAAGAAAAGTTCGACATTTAAATTGAACTTAAATTGAACCCCGATTGTACTCGCCCTTCAAATTTATAAATATATGTGCGTGCCTGCGGCTTTCTCCTTGATTAAAGAAAACATTCACAAAGGATGTATTATACTAATGTATTATACCAAGAATTTGAAAACAAAATACAGTATGTCTATGTGTATGTATGTGTATGTGTATATATATAAAAGTAGGTTGAACAAAGCCCTATTTTGGTTTA ATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGTCGCCCCGTTCGAGTTTACAGCCTTTTGAGAAGGATGAGATTCGCAAAGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCGGTTGGGAAATTAAACAAAATCATCTGTAG MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEIKQNHL Homology
BLAST of PI0003548 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy TrEMBL
Match: A0A0A0L3S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.5e-51 Identity = 108/115 (93.91%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy TrEMBL
Match: A0A5D3D1P7 (Protein LITTLE ZIPPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004090 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34 Identity = 79/83 (95.18%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34 Identity = 88/105 (83.81%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 8.1e-34 Identity = 87/105 (82.86%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of PI0003548 vs. ExPASy TrEMBL
Match: A0A6J1CZF0 (protein LITTLE ZIPPER 2-like OS=Momordica charantia OX=3673 GN=LOC111015992 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27 Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of PI0003548 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_011002 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 5.2e-51 Identity = 108/115 (93.91%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of PI0003548 vs. NCBI nr
Match: XP_038901104.1 (protein LITTLE ZIPPER 1-like [Benincasa hispida]) HSP 1 Score: 174.5 bits (441), Expect = 5.3e-40 Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of PI0003548 vs. NCBI nr
Match: KAA0049024.1 (protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa] >TYK17540.1 protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34 Identity = 79/83 (95.18%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of PI0003548 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34 Identity = 88/105 (83.81%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of PI0003548 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima]) HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33 Identity = 87/105 (82.86%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of PI0003548 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of PI0003548 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 58.9 bits (141), Expect = 3.1e-09 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of PI0003548 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 57.4 bits (137), Expect = 8.9e-09 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of PI0003548 vs. TAIR 10
Match: AT3G52770.1 (protein binding ) HSP 1 Score: 45.4 bits (106), Expect = 3.5e-05 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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