PI0003542 (gene) Melon (PI 482460) v1

Overview


Name	PI0003542
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr01: 15043539 .. 15047771 (+)
RNA-Seq Expression	PI0003542
Synteny	PI0003542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTTAGGCCTTCTGAGTCATTTGGGCCAAATTGTGATGAGCATCATTTGGTGGTTGGGCCTAATGCTGATGGGGAGTTAAATAAGACTCAATTGAAGGGCAACGTTGGGCCTTCTTTGATGGTTAGTGGTGGGCCTGTTTGTGTGGGGCAAAATGATGTGTCAAAGGATAAAATTTATGAGAAAGAGTCGGTTAAGGAGGCTGCCAATACACAGAATTTAAACTGTGAAGGAAGGATTGATTCAAGGAACGTTGATTCGTTGGCATCCCTTTTTGGTTCTTCTTCAAGAAATGGTCTTTCGTATACTCCACCATCTTTGGTTGGATCGAAATTAGTGGTTATTCCTTTGGAAGAGATTATAACGTAAGGTGTTCGGATGTGGGAAAACTCTTTAGTGGGCCAACTTGTTGACGCTACATTGCCATATGCAGTGATTCAACGACTTATTGAGAAAATTTGGGGGAAAATCGAAATACAAACCATTACGATGTTAGAGAATGGGCTTATTTGCTTTCAATTTCGTCGTCCCAATTCGGTAGAGAGGATTCTATCCCGTGGGCCATGGCATCTTGGTGGGAAACCTATGCTCCTCCACAAATGGGTTCCAGGTATTGTCCCTGAAACCTTTGTTTTTAATTCTGTTCCTGTGTGGATCAAACTGGGTCGTATTCCCATGGAGTTGTGGACTGAGTTAGGTATTGCAGTCATTGCTAGTGTTATTGGTAAACCTCTTTCTTTAGATTTGGCCACTAAGGAGAGACGTAGACTGTCGTTTGCTAGGGTGTGTGTTGAAGTAAAAGGGGGTGCTGATTTGCCTACTGAGGTCACAGTTAATTTGAGGGGTGTGGAATGCAGTGTACCGGTTACTTATGAGTGGAAACCCCATATGTGTAATTCATGTCATTCGTTTGGTCATTCGTTGGTAAGTGCCCTCAGAAGGAGACGTCTCAGGTGCAACAAGAGGTGGATGTGAGCATGGCTGTTCCTAGCACGGGTGTTGAGCAAGCTATTGTGGCTTGTGGGGAGGTGGTGTTAGAATCCTTTAAACAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCAAGTAAGCAGGTGTCGCCGACCATTAATGGTGGGGGTAAGAAAGAGGATTTTACTACTGTGACTCGAAAAAATTGGTTTCAGTGAGAGATAAGGGGAAAAGGAAGAGTATGCAGGCTTTGCAGAACTCTTTTGGTAGTTTTTCTGATTTGAGTGAGGGGGAAAATTGGGCGTTGGCCTTAAAGGTTAGTACGCCTCCTCCCTTACAGATAGTGGGTGGTGATGGTGGCATGCCTAGGTTGAGTCCAAATGGTGGTCCTATGGGGATAAGTGTGGATGAGAGTAACCATGATTAGTTGGTGTTCGTGGAATATACGTGGTCTTAATGACCCGGTGAAGTGCAGGACGGTGAGTGATTTCTTGAGGGTTTCCTTTGTTGGGTTTTGTTATCTCCTGGAGACAAAAGTTCGTGAGGGAAATTTTTGTTCTGTTTCTAGGAGGTTTGGGGACGCTTGGAGTTACTCTTGTAGCTATAGCAGAAGTGGTGTGGGTCGGATTTGGGTGATGTGGAAGAAGGATAGGTTTGATTTTACTCCTAGCGTGGTGGATGAGCAGTTTGTTTCAAGTGTCATTTCTGATTTGCATTCTAGTATGACTGTGGAGGTGTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGCTTTGGCGTCGGTTAGTTGAGATCACTTCTAGTTGGTCAAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAGTTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTGGTTACTAGAGATATGGAGGAATTTGATCTTGCTATTCGTGAGGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACCGGTGCACTTGGACCAGCAAGGTGCGAGGTTCAGGTCGGTTGCGTCGGCTTGATCGTATTTTGGTTAATGAGCAAGGGTTAATGGCTTGGCCTAGTTTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGATGTTGAGCAGCAGAGGCGTATTATTTTGTTTCGTTTCTTTAATCATTGGGTGGAGGATTCGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAAGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGAAATTTGCATGATCTGAAACTTGTGCTTTGTAGACATTTTGGTAGACATATCAGAGGCCTTAGTGAGGAGGTGTGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATTCCTTTTGGTCAGCTATCAGTCAAGAAGAAGCCTCTCTCCGTCAGAAATCACGGGTTAGGTGGTTGGAGCTTGGGGATCAGAATTCTGCCTTTTTTCATCGTTCGATTCGTTCCCATATTGGTCGTAATAATTTGCTCTCTATTGTGGATTCTAAGGGTATTCGGGTGACGTCCCATGAGAGGTTGGTGCAGGTGGCTGGTAATTTTTTTCGTAATAGTCTTGGGTCCCAGGTGGCTGGTTATAGGGAGCTCTATCCTGTGTTGGAGGAGGTGGTTCAGTTTAGGTGGTTGGAGGAGTGTTGTCTTGCGTTACAGGCTCCGATTAGGCGAGAGGAGATTAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTAGTCCTGATGGTTTTTCGGCAGGATTCTTCAAGGGTGCTTGGAACACGGTTGGTGAGGATTTTTGTGATGTTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCCTAGGGTTAATGCTACAGCGATCACCCTCATTCCCATACGTAGCGGGGCTGATCGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTTTACAAGTGCATTTCTAAAATTTTGGCGGATAGGCTTCGTGTGTGGCTTCCTTCTTTTATTAGTGGTAATCAGTCAACCTTTGTTGTAGGGAGGAGTATTGTTGATAACATCTGCTTTGTCAGGAGATGGTGGGGGATTATCATGGTTCTTCGGGTTCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTGAATTGGGATTTTTTGTTCAGCTTGTTGCTTGCTATTGGCACTCCCTTGCGTTTTGTGAGTTGGATTAGGGCATGTGTTACTTCTCCTATGTTCTCTATCATGGTTAATGGTTCTGTCGAGGGGTTTTTTCCTAGTAGAAAAGGGTTACGGCAGGGTGACCCTTTATCCCCCTTTTTGTTTGTGATGGTGATGGAGGTGCTAACTCGTCTTTTGAATAGACCCTCTCTGGATTTCAAGTATCATCATCGTTGTGAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCGGACACTGATTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATTTGGATAAGAGCTCTATGTTTGTGGCGGGGGTGACATTGAGGCTGCTACTGTGTTGGCTGATAGTATAGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACCTGGGTGTTCCCTTACTCTCTGGTCGTCTGCGTGCTTCGGATTGTGCTCCACTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCAGCTAGAGTTTTATCCTTCGCTCGTAGGCTTCAGCTTGTGCATTCCGTGTTGCAGAGTTTTCAGGTCTTTTGGGCCAGCGTGTTTGTGTTGTTGGCTGAGGTGCATCATGCGGTTGATAGTCTTTGATGTTGTATTTGTAGAGGGGAAAGGAGGTTGGGAGAGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCACCCGTTAAAGGAAAGGGGTCTAAATATTCGGGAGGGAAAGTCGTGGAATAGTGCGTGTATCTTGAAGATTCTTTGGCTAAAGTTGACTAGTTCTGGGTCTCTTTGGGTTGCTTGGGTGGAGGCTTATATTCTAAAGGGGCGGCCGTTGTGGTCTGTGGACAGTGGGGTTGGTCGGTTCTGGAGTCTTCGTGCTATTCTAAAGCATCGTGATATTTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGTAGGTGTTATCGTGTGTGGCTTGACCCTTGGCTGCATGGAGGAGCGATCATTCGGTAG

mRNA sequence

ATGCAAGTTAGGCCTTCTGAGTCATTTGGGCCAAATTGTGATGAGCATCATTTGGTGGTTGGGCCTAATGCTGATGGGGAGTTAAATAAGACTCAATTGAAGGGCAACGTTGGGCCTTCTTTGATGGTTAGTGGTGGGCCTGTTTGTGTGGGGCAAAATGATGTGTCAAAGGATAAAATTTATGAGAAAGAGTCGGTTAAGGAGGCTGCCAATACACAGAATTTAAACTGTGAAGGAAGGATTGATTCAAGGAACGTTGATTCGTTGGCATCCCTTTTTGGTTCTTCTTCAAGAAATGGTCTTTCGTATACTCCACCATCTTTGGTTGGATCGAAATTAGTGGTTATTCCTTTGGAAGAGATTATAACGATTCTATCCCGTGGGCCATGGCATCTTGGTGGGAAACCTATGCTCCTCCACAAATGGGTTCCAGGTATTGTCCCTGAAACCTTTGTTTTTAATTCTGTTCCTGTGTGGATCAAACTGGGTCGTATTCCCATGGAGTTGTGGACTGAGTTAGGTATTGCAGTCATTGCTAGTGTTATTGGTAAACCTCTTTCTTTAGATTTGGCCACTAAGGAGAGACGTAGACTGTCGTTTGCTAGGGTGTGTGTTGAAGTAAAAGGGGGTGCTGATTTGCCTACTGAGTGCCCTCAGAAGGAGACGTCTCAGGTGCAACAAGAGGTGGATGTGAGCATGGCTGTTCCTAGCACGGGTGTTGAGCAAGCTATTGTGGCTTGTGGGGAGGTGGTGTTAGAATCCTTTAAACAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCAAGTAAGCAGGTGTCGCCGACCATTAATGGTGGGGTGAGAGATAAGGGGAAAAGGAAGAGTATGCAGGCTTTGCAGAACTCTTTTGGTAGTTTTTCTGATTTGAGTGAGGGGGAAAATTGGGCGTTGGCCTTAAAGGTTAGTACGCCTCCTCCCTTACAGATAGTGGGTGGTGATGGTGGCATGCCTAGGTTGAGTCCAAATGGTGGTCCTATGGGGATAAGTGTGGATGAGAGAGGTTTGGGGACGCTTGGAGTTACTCTTGTAGCTATAGCAGAAGTGTATGACTGTGGAGGTGTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGCTTTGGCGTCGGTTAGTTGAGATCACTTCTAGTTGGTCAAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAGTTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTGGTTACTAGAGATATGGAGGAATTTGATCTTGCTATTCGTGAGGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACCGGTGCACTTGGACCAGCAAGGTGCGAGGTTCAGGTCGGTTGCGTCGGCTTGATCGTATTTTGGTTAATGAGCAAGGGTTAATGGCTTGGCCTAGTTTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGATGTTGAGCAGCAGAGGCGTATTATTTTGTTTCGTTTCTTTAATCATTGGGTGGAGGATTCGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAAGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGAAATTTGCATGATCTGAAACTTGTGCTTTGTAGACATTTTGGTAGACATATCAGAGGCCTTAGTGAGGAGGTGTGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATTCCTTTTGGTCAGCTATCAGTCAAGAAGAAGCCTCTCTCCGTCAGAAATCACGGGTTAGGTGGTTGGAGCTTGGGGATCAGAATTCTGCCTTTTTTCATCGTTCGATTCGTTCCCATATTGGTCGTAATAATTTGCTCTCTATTGTGGATTCTAAGGGTATTCGGGTGACGTCCCATGAGAGGTTGGTGCAGGTGGCTGAGGGGAAAGGAGGTTGGGAGAGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCACCCGTTAAAGGAAAGGGGTCTAAATATTCGGGAGGGAAAGTCGTGGAATAGTGCGTGTATCTTGAAGATTCTTTGGCTAAAGTTGACTAGTTCTGGGTCTCTTTGGGTTGCTTGGGTGGAGGCTTATATTCTAAAGGGGCGGCCGTTGTGGTCTGTGGACAGTGGGGTTGGTCGGTTCTGGAGTCTTCGTGCTATTCTAAAGCATCGTGATATTTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGTAGGTGTTATCGTGTGTGGCTTGACCCTTGGCTGCATGGAGGAGCGATCATTCGGTAG

Coding sequence (CDS)

ATGCAAGTTAGGCCTTCTGAGTCATTTGGGCCAAATTGTGATGAGCATCATTTGGTGGTTGGGCCTAATGCTGATGGGGAGTTAAATAAGACTCAATTGAAGGGCAACGTTGGGCCTTCTTTGATGGTTAGTGGTGGGCCTGTTTGTGTGGGGCAAAATGATGTGTCAAAGGATAAAATTTATGAGAAAGAGTCGGTTAAGGAGGCTGCCAATACACAGAATTTAAACTGTGAAGGAAGGATTGATTCAAGGAACGTTGATTCGTTGGCATCCCTTTTTGGTTCTTCTTCAAGAAATGGTCTTTCGTATACTCCACCATCTTTGGTTGGATCGAAATTAGTGGTTATTCCTTTGGAAGAGATTATAACGATTCTATCCCGTGGGCCATGGCATCTTGGTGGGAAACCTATGCTCCTCCACAAATGGGTTCCAGGTATTGTCCCTGAAACCTTTGTTTTTAATTCTGTTCCTGTGTGGATCAAACTGGGTCGTATTCCCATGGAGTTGTGGACTGAGTTAGGTATTGCAGTCATTGCTAGTGTTATTGGTAAACCTCTTTCTTTAGATTTGGCCACTAAGGAGAGACGTAGACTGTCGTTTGCTAGGGTGTGTGTTGAAGTAAAAGGGGGTGCTGATTTGCCTACTGAGTGCCCTCAGAAGGAGACGTCTCAGGTGCAACAAGAGGTGGATGTGAGCATGGCTGTTCCTAGCACGGGTGTTGAGCAAGCTATTGTGGCTTGTGGGGAGGTGGTGTTAGAATCCTTTAAACAGTTAGAGGAAGGTGAGATTCAGGGTTCTCCAAGTAAGCAGGTGTCGCCGACCATTAATGGTGGGGTGAGAGATAAGGGGAAAAGGAAGAGTATGCAGGCTTTGCAGAACTCTTTTGGTAGTTTTTCTGATTTGAGTGAGGGGGAAAATTGGGCGTTGGCCTTAAAGGTTAGTACGCCTCCTCCCTTACAGATAGTGGGTGGTGATGGTGGCATGCCTAGGTTGAGTCCAAATGGTGGTCCTATGGGGATAAGTGTGGATGAGAGAGGTTTGGGGACGCTTGGAGTTACTCTTGTAGCTATAGCAGAAGTGTATGACTGTGGAGGTGTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGCTTTGGCGTCGGTTAGTTGAGATCACTTCTAGTTGGTCAAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAGTTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTGGTTACTAGAGATATGGAGGAATTTGATCTTGCTATTCGTGAGGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACCGGTGCACTTGGACCAGCAAGGTGCGAGGTTCAGGTCGGTTGCGTCGGCTTGATCGTATTTTGGTTAATGAGCAAGGGTTAATGGCTTGGCCTAGTTTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGATGTTGAGCAGCAGAGGCGTATTATTTTGTTTCGTTTCTTTAATCATTGGGTGGAGGATTCGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAAGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGAAATTTGCATGATCTGAAACTTGTGCTTTGTAGACATTTTGGTAGACATATCAGAGGCCTTAGTGAGGAGGTGTGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATTCCTTTTGGTCAGCTATCAGTCAAGAAGAAGCCTCTCTCCGTCAGAAATCACGGGTTAGGTGGTTGGAGCTTGGGGATCAGAATTCTGCCTTTTTTCATCGTTCGATTCGTTCCCATATTGGTCGTAATAATTTGCTCTCTATTGTGGATTCTAAGGGTATTCGGGTGACGTCCCATGAGAGGTTGGTGCAGGTGGCTGAGGGGAAAGGAGGTTGGGAGAGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCACCCGTTAAAGGAAAGGGGTCTAAATATTCGGGAGGGAAAGTCGTGGAATAGTGCGTGTATCTTGAAGATTCTTTGGCTAAAGTTGACTAGTTCTGGGTCTCTTTGGGTTGCTTGGGTGGAGGCTTATATTCTAAAGGGGCGGCCGTTGTGGTCTGTGGACAGTGGGGTTGGTCGGTTCTGGAGTCTTCGTGCTATTCTAAAGCATCGTGATATTTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGTAGGTGTTATCGTGTGTGGCTTGACCCTTGGCTGCATGGAGGAGCGATCATTCGGTAG

Protein sequence

MQVRPSESFGPNCDEHHLVVGPNADGELNKTQLKGNVGPSLMVSGGPVCVGQNDVSKDKIYEKESVKEAANTQNLNCEGRIDSRNVDSLASLFGSSSRNGLSYTPPSLVGSKLVVIPLEEIITILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLPTECPQKETSQVQQEVDVSMAVPSTGVEQAIVACGEVVLESFKQLEEGEIQGSPSKQVSPTINGGVRDKGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIVGGDGGMPRLSPNGGPMGISVDERGLGTLGVTLVAIAEVYDCGGVCVYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAISQEEASLRQKSRVRWLELGDQNSAFFHRSIRSHIGRNNLLSIVDSKGIRVTSHERLVQVAEGKGGWERGAKVAWVDVCHPLKERGLNIREGKSWNSACILKILWLKLTSSGSLWVAWVEAYILKGRPLWSVDSGVGRFWSLRAILKHRDIFREHVHMEVGDGRCYRVWLDPWLHGGAIIR

Homology

[Close]

BLAST of PI0003542 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-08
Identity = 35/111 (31.53%), Postives = 46/111 (41.44%), Query Frame = 0


Query: 671 VAWVDVCHPLKERGLNIREGKSWNSACILKILWLKLTSSGSLWVAWVEAYILKGR---PL 730
           V W  VC P KE GL +R  KS N A I K+ W  L    SLW   ++     G      
Sbjct: 87  VKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSR 146

Query: 731 WSVDSGVGRFWSLRAILKHRDIFREHVHMEVGDGRCYRVWLDPWLHGGAII 779
           W +  G          +  RD+    V    GDG+  R W D W+ G  ++
Sbjct: 147 WLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLL 197

[Close]

BLAST of PI0003542 vs. ExPASy TrEMBL
Match: A0A5A7V275 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00430 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 9.6e-155
Identity = 307/592 (51.86%), Postives = 382/592 (64.53%), Query Frame = 0


Query: 137 MLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIGKPLSLDLATKERR 196
           MLL KW PGIVPE+FVFNSV VWI+LG+IPMELWTE G+AV+AS +GKP+SLDL TKERR
Sbjct: 1   MLLRKWTPGIVPESFVFNSVSVWIRLGKIPMELWTEAGLAVVASAVGKPISLDLTTKERR 60

Query: 197 RLSFARVCVEVKGGADLP-----------------------------------TECPQKE 256
           RLS+ARVCVE++GG+++P                                   ++C +  
Sbjct: 61  RLSYARVCVELEGGSNMPAQITVSLGGVDFNVSINYEWKPRKCNLCCAFGHSGSKCSRSV 120

Query: 257 TSQVQQEVDVSMAVPSTGVEQAIVACGEVVLESFKQLEEGEIQGSPSKQVSPTINGGVRD 316
            S+  QE  V   +           CGEVVLESFKQLEE EI+ SP++            
Sbjct: 121 ESKTIQEEVVHKIIHGKRDGLDSKPCGEVVLESFKQLEEVEIRSSPNRH----------- 180

Query: 317 KGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIVGGDGGMPRLSPNGGPMGIS 376
                               S+ + WAL++   +PPPLQ+  G   +  +S + GP G+ 
Sbjct: 181 -------------------NSDADKWALSIIEGSPPPLQVDEGTDVLSGVSSSIGPKGLH 240

Query: 377 --------------------------------VDERGL-GTLGVTLVAI-AEVYDCGGVC 436
                                           VDE+ + GTL   L  +  EV+     C
Sbjct: 241 TLNNSHDYYSNSGVGQIWVMWKKNRFSFSTRVVDEQFVTGTLTDLLFGVCVEVF-----C 300

Query: 437 VYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAI 496
           VYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNA+RVHSEA GGS +  +ME+FDLAI
Sbjct: 301 VYASNSNIERRLLWHRLVETTSAWSSPGVVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAI 360

Query: 497 READLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSP 556
           R+ADLVEP+VQGN  TWTSKV GSG LRRLDR+LVN+  L AWP++ V VLPWGISDHSP
Sbjct: 361 RDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRVLVNDAWLSAWPTMLVNVLPWGISDHSP 420

Query: 557 ILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLC 616
           ILFYP  +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLMRNLH LK  L 
Sbjct: 421 ILFYPSFQLNSKVVSFRFFNHWVEDPSFIEVVARMWSRHEGVSPLVSLMRNLHHLKPTLR 480

Query: 617 RHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAISQEEASLR 660
           R FGRHI+ LSEEV  AKEAMDRAQR+VER+  S   SR A +AT++FW+A+  EEASLR
Sbjct: 481 RQFGRHIQSLSEEVHIAKEAMDRAQRDVERNSMSDVLSRQASLATETFWTAVRLEEASLR 540

[Close]

BLAST of PI0003542 vs. ExPASy TrEMBL
Match: A0A1S3CRZ6 (uncharacterized protein LOC103504100 OS=Cucumis melo OX=3656 GN=LOC103504100 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.3e-146
Identity = 297/581 (51.12%), Postives = 374/581 (64.37%), Query Frame = 0


Query: 167 MELWTELGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLP------------ 226
           MELWTE G+AV+AS +GKP+SLDL TKERRRLS+ARVCVE++GG+++P            
Sbjct: 1   MELWTEAGLAVVASAVGKPISLDLTTKERRRLSYARVCVELEGGSNMPAQITVSLGGVDF 60

Query: 227 -----------------------TECPQKETSQVQQEVDVSMAVPSTGVEQAIVACGEVV 286
                                  ++C +   S+  QE  V   +           CGEVV
Sbjct: 61  NVSINYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEEVVHKIIHGKRDGLDSKPCGEVV 120

Query: 287 LESFKQLEEGEIQGSPSKQVSPTINGG------------------VRDKGKRKSMQALQ- 346
           LESFKQLEE EI+ SP++  S    GG                  VRD+G  KSM+ +  
Sbjct: 121 LESFKQLEEVEIRSSPNRHNSKVERGGGKSDEFTLVTRKKSELVSVRDRG--KSMEVIMP 180

Query: 347 NSFGSFSDLSEGENWALALKVSTPPPLQIVGGDGGMPRLSPNGGPMGIS----------- 406
           NSFGS  ++ + + WAL++   +PPPLQ+  G   +  +S + GP G+            
Sbjct: 181 NSFGSLLEVGDADKWALSIIEGSPPPLQVDEGTDVLSGVSSSIGPKGLHTLNNSHDYYSN 240

Query: 407 ---------------------VDERGL-GTLGVTLVAI-AEVYDCGGVCVYASNSNMDRR 466
                                VDE+ + GTL   L  +  EV+     CVYASNSN++RR
Sbjct: 241 SGVGQIWVMWKKNRFSFSTRVVDEQFVTGTLTDLLFGVCVEVF-----CVYASNSNIERR 300

Query: 467 VLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAIREADLVEPAVQ 526
           +LW RLVE TS+WSSPGVVMGDFNA+RVHSEA GGS +  +ME+FDLAIR+ADLVEP+VQ
Sbjct: 301 LLWHRLVETTSAWSSPGVVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQ 360

Query: 527 GNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDVEQQR 586
           GN  TWTSKV GSG LRRLDR+LVN+  L AWP++ V VLPWGISDHSPILFYP  +   
Sbjct: 361 GNWFTWTSKVHGSGMLRRLDRVLVNDAWLSAWPTMLVNVLPWGISDHSPILFYPSFQLNS 420

Query: 587 RIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLCRHFGRHIRGLS 646
           +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLMRNLH LK  L R FGRHI+ LS
Sbjct: 421 KVVSFRFFNHWVEDPSFIEVVARMWSRHEGVSPLVSLMRNLHHLKPTLRRQFGRHIQSLS 480

Query: 647 EEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAISQEEASLRQKSRVRWLELG 660
           EEV  AKEAMDRAQR+VER+  S   SR A +AT++FW+A+  EEASLRQKSR+RWL+LG
Sbjct: 481 EEVHIAKEAMDRAQRDVERNSMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 540

[Close]

BLAST of PI0003542 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 9.3e-142
Identity = 305/645 (47.29%), Postives = 378/645 (58.60%), Query Frame = 0


Query: 124 ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIG 183
           ILSRGPWHLGGKPMLL KW  GIVPE+FVFNSVPVWI+LGRIPMELWTE  +A++ASV+G
Sbjct: 25  ILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVG 84

Query: 184 KPLSLDLATKERRRLSFARVCVEVKGGADLPTE--------------------------- 243
           KP++LDLATKE  RLS+ARVCV+++G  ++  E                           
Sbjct: 85  KPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCC 144

Query: 244 --------CPQKETSQVQQEVDVSMAVPSTGVEQAIVACGEVVLESFKQLEEGEIQGSPS 303
                   CP+   S++ QE  VS  +P  G       C +VVLESFKQLEEGEI+ SP+
Sbjct: 145 AIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPN 204

Query: 304 KQVSPTING------------------GVRDKGKRKSMQALQNSFGSFSDLSEGENWALA 363
           +  S                        VRD+GK   + A+ NSFGS  ++ + + WAL 
Sbjct: 205 RHGSHVEKEVGKRDEFTLVTRKKSELVSVRDRGK-SIVVAMPNSFGSLLEVGDVDKWALT 264

Query: 364 LKVSTPPPLQIVGGDGGMPRLSP-----------------------------------NG 423
           +   +PPPLQ+  G G +  L                                     N 
Sbjct: 265 VIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNS 324

Query: 424 GPMGISVDERGLGTLGV---------TLVAIAEVYDCG-------GV-----CVYASNSN 483
                S    G+G + V         +   + E +  G       GV     CVYASNSN
Sbjct: 325 WDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSN 384

Query: 484 MDRRVLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAIREADLVE 543
           ++RR+LWRRLVEITS WSSP VVMGDFNA+RVH EA GGS +  +ME+FDLA R+ADLVE
Sbjct: 385 IERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEAFGGSPIQGEMEDFDLATRDADLVE 444

Query: 544 PAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDV 603
           P+VQGN  TWTSKV GSG LRRLDRILVN++ L AWP+L V                   
Sbjct: 445 PSVQGNWFTWTSKVHGSGMLRRLDRILVNDEWLSAWPTLLV------------------- 504

Query: 604 EQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLCRHFGRHI 660
                          VED SF +VV+ +W R  GVSPLVSLMRNL +LK  L R FGRHI
Sbjct: 505 -----------LQSLVEDPSFIEVVARMWGRHEGVSPLVSLMRNLQNLKPTLRRRFGRHI 564

[Close]

BLAST of PI0003542 vs. ExPASy TrEMBL
Match: A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.1e-132
Identity = 369/1124 (32.83%), Postives = 468/1124 (41.64%), Query Frame = 0


Query: 53   NDVSKDKIYEKESVKEAANTQNLNCEGRIDSRNVDSLASLFGSSSRNGLSYTPPSLVGSK 112
            ++VS   +   ++   +   QN   +  IDS++  + ASLFG+SS   L YT P ++G K
Sbjct: 262  SNVSSGCVLNNQNANVSNVVQNGINKQLIDSKS--TWASLFGTSSEESLLYTLPKIIGDK 321

Query: 113  LVVIPLEEIIT------------------------------------------------- 172
            +VV P EE+I                                                  
Sbjct: 322  IVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYTVIQHLVEKIWGKIEMPIITILENDLIC 381

Query: 173  -----------ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTE 232
                       ILSRGPWHL  K MLL KW PGIVPE FVFNSVPVWI+LG++PMELWTE
Sbjct: 382  FQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPGIVPEFFVFNSVPVWIRLGKLPMELWTE 441

Query: 233  LGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLPTEC--------------- 292
             G+AV+AS +GKP+SLDLATKERRRLS+ARVCVE++ G+++P E                
Sbjct: 442  AGLAVVASAVGKPISLDLATKERRRLSYARVCVELEAGSNMPAEITVSLRGVDFNVSVNY 501

Query: 293  ---PQKET---SQVQQEVDVSMAVPSTGVEQAIV---------ACGEVVLESFKQLEEGE 352
               P+K     +      + S +V S  +++ +V          CGEVVLESFKQLEEGE
Sbjct: 502  EWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEVVHKGDDVDSEPCGEVVLESFKQLEEGE 561

Query: 353  IQGSPSKQVSPTINGGVRDKGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIV 412
            I+ SP++  S  +  GV    +   +   ++   S  D           K  +PPPLQ+ 
Sbjct: 562  IRNSPNRHNS-QVEKGVGKSDEFTLVTRRKSELVSVRDRG---------KKGSPPPLQV- 621

Query: 413  GGDGGMPRLSPNGGPMGISVDERGLGTLGVTLVAIAEV-----------------YDCGG 472
              D G   L  NG      VD  G  ++G   +    V                 Y C  
Sbjct: 622  --DEGTDIL--NGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCS- 681

Query: 473  VCVYASNSNMDR-RVLWRR-----LVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRD 532
                 SNS + R  V+W++        +       GVVMGDFNA+RV+SEA GGS +  +
Sbjct: 682  ----YSNSGVGRIWVMWKKNRFSFSTNVMDEQFITGVVMGDFNAIRVYSEAFGGSPIQGE 741

Query: 533  MEEFDLAIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLP 592
            ME+FDLAIR+ DLVEP VQGN  TWTSKV+G                             
Sbjct: 742  MEDFDLAIRDVDLVEPLVQGNWFTWTSKVQG----------------------------- 801

Query: 593  WGISDHSPILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNL 652
                           +   +++ FRFFNHWVED SF +VV+  W R  GVSPLVSLM+NL
Sbjct: 802  --------------FQLNSKVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNL 861

Query: 653  HDLKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAI 712
            H LK +L   FGRHI+ L+E+V  AK AMD AQR+VER+P S   SR A +AT++FW+A+
Sbjct: 862  HHLKPILRGRFGRHIKSLNEKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAV 921

Query: 713  SQEEASLRQKSRVRWLELGDQNSAFFHRSIRSHIGRNNLLSIVDS--KGIRVTSHERLVQ 772
              EEASLRQKSR+RWL+LGDQN+AFFHR + S + RN+LLS+VDS   G RV+SH+ +V 
Sbjct: 922  RLEEASLRQKSRIRWLKLGDQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVH 981

Query: 773  VA---------------------------------------------------------- 779
            +A                                                          
Sbjct: 982  MAALQLPISREEVRRVLLTMDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDF 1041

[Close]

BLAST of PI0003542 vs. ExPASy TrEMBL
Match: A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-131
Identity = 373/1134 (32.89%), Postives = 469/1134 (41.36%), Query Frame = 0


Query: 53   NDVSKDKIYEKESVKEAANTQNLNCEGRIDSRNVDSLASLFGSSSRNGLSYTPPSLVGSK 112
            ++VS   +   ++   +   QN   +  IDS++  + ASLFG+SS   L YT P ++G K
Sbjct: 262  SNVSSGCVLNNQNANVSNVVQNGINKQLIDSKS--TWASLFGTSSEESLLYTLPKIIGDK 321

Query: 113  LVVIPLEEIIT------------------------------------------------- 172
            +VV P E++I                                                  
Sbjct: 322  IVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYTVIQHLVEKIWGKIEMPIITILENDLIC 381

Query: 173  -----------ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTE 232
                       ILSRGPWHL  K MLL KW PGIVPE FVFNSVPVWI+LG++PMELWTE
Sbjct: 382  FQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPGIVPEFFVFNSVPVWIRLGKLPMELWTE 441

Query: 233  LGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLPTEC--------------- 292
             G+AV+AS +GKP+SLDLATKERRRLS+ARVCVE++ G+++P E                
Sbjct: 442  AGLAVVASAVGKPISLDLATKERRRLSYARVCVELEAGSNMPAEITVSLRGVDFNVSVNY 501

Query: 293  ---PQKET---SQVQQEVDVSMAVPSTGVEQAIV---------ACGEVVLESFKQLEEGE 352
               P+K     +      + S +V S  +++ +V          CGEVVLESFKQLEEGE
Sbjct: 502  EWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEVVHKGDDVDSEPCGEVVLESFKQLEEGE 561

Query: 353  IQGSPSKQVSPTINGGVRDKGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIV 412
            I+ SP++  S  +  GV    +   +   ++   S  D           K  +PPPLQ+ 
Sbjct: 562  IRNSPNRHNS-QVEKGVGKSDEFTLVTRRKSELVSVRDRG---------KKGSPPPLQV- 621

Query: 413  GGDGGMPRLSPNGGPMGISVDERGLGTLGVTLVAIAEV-----------------YDCGG 472
              D G   L  NG      VD  G  ++G   +    V                 Y C  
Sbjct: 622  --DEGTDIL--NGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCS- 681

Query: 473  VCVYASNSNMDR-RVLWRR---------------LVEITSSWSSPGVVMGDFNAVRVHSE 532
                 SNS + R  V+W++                VEITS+WSSPGVVMGDFNA+RV+SE
Sbjct: 682  ----YSNSGVGRIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDFNAIRVYSE 741

Query: 533  ACGGSLVTRDMEEFDLAIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMA 592
            A GGS +  +ME+FDLAIR+ DLVEP VQGN     SKV                     
Sbjct: 742  AFGGSPIQGEMEDFDLAIRDVDLVEPLVQGNCFQLNSKV--------------------- 801

Query: 593  WPSLRVTVLPWGISDHSPILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGV 652
                                           + FRFFNHWVED SF +VV+  W R  GV
Sbjct: 802  -------------------------------VSFRFFNHWVEDPSFIEVVARRWSRHEGV 861

Query: 653  SPLVSLMRNLHDLKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAG 712
            SPLVSLM+NLH LK +L   FGRHI+ L+E+V  AK AMD AQR+VER+P S   SR A 
Sbjct: 862  SPLVSLMKNLHHLKPILRGRFGRHIKSLNEKVRIAKLAMDIAQRKVERNPMSDVLSRQAS 921

Query: 713  VATDSFWSAISQEEASLRQKSRVRWLELGDQNSAFFHRSIRSHIGRNNLLSIVDS--KGI 772
            +AT++FW+A+  EEASLRQKSR+RWL+LGDQN+AFFHR + S + RN+LLS+VDS   G 
Sbjct: 922  LATETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRFVYSRMSRNSLLSLVDSDGDGS 981

Query: 773  RVTSHERLVQVA------------------------------------------------ 779
            RV+SH+ +V +A                                                
Sbjct: 982  RVSSHDGVVHMAALQLPISREEVRRVLLTMDSGKAPGPDGFSLGFFKVWVNATAITLIPK 1041

[Close]

BLAST of PI0003542 vs. NCBI nr
Match: KAA0059841.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK24796.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 557.4 bits (1435), Expect = 2.0e-154
Identity = 307/592 (51.86%), Postives = 382/592 (64.53%), Query Frame = 0


Query: 137 MLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIGKPLSLDLATKERR 196
           MLL KW PGIVPE+FVFNSV VWI+LG+IPMELWTE G+AV+AS +GKP+SLDL TKERR
Sbjct: 1   MLLRKWTPGIVPESFVFNSVSVWIRLGKIPMELWTEAGLAVVASAVGKPISLDLTTKERR 60

Query: 197 RLSFARVCVEVKGGADLP-----------------------------------TECPQKE 256
           RLS+ARVCVE++GG+++P                                   ++C +  
Sbjct: 61  RLSYARVCVELEGGSNMPAQITVSLGGVDFNVSINYEWKPRKCNLCCAFGHSGSKCSRSV 120

Query: 257 TSQVQQEVDVSMAVPSTGVEQAIVACGEVVLESFKQLEEGEIQGSPSKQVSPTINGGVRD 316
            S+  QE  V   +           CGEVVLESFKQLEE EI+ SP++            
Sbjct: 121 ESKTIQEEVVHKIIHGKRDGLDSKPCGEVVLESFKQLEEVEIRSSPNRH----------- 180

Query: 317 KGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIVGGDGGMPRLSPNGGPMGIS 376
                               S+ + WAL++   +PPPLQ+  G   +  +S + GP G+ 
Sbjct: 181 -------------------NSDADKWALSIIEGSPPPLQVDEGTDVLSGVSSSIGPKGLH 240

Query: 377 --------------------------------VDERGL-GTLGVTLVAI-AEVYDCGGVC 436
                                           VDE+ + GTL   L  +  EV+     C
Sbjct: 241 TLNNSHDYYSNSGVGQIWVMWKKNRFSFSTRVVDEQFVTGTLTDLLFGVCVEVF-----C 300

Query: 437 VYASNSNMDRRVLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAI 496
           VYASNSN++RR+LW RLVE TS+WSSPGVVMGDFNA+RVHSEA GGS +  +ME+FDLAI
Sbjct: 301 VYASNSNIERRLLWHRLVETTSAWSSPGVVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAI 360

Query: 497 READLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSP 556
           R+ADLVEP+VQGN  TWTSKV GSG LRRLDR+LVN+  L AWP++ V VLPWGISDHSP
Sbjct: 361 RDADLVEPSVQGNWFTWTSKVHGSGMLRRLDRVLVNDAWLSAWPTMLVNVLPWGISDHSP 420

Query: 557 ILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLC 616
           ILFYP  +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLMRNLH LK  L 
Sbjct: 421 ILFYPSFQLNSKVVSFRFFNHWVEDPSFIEVVARMWSRHEGVSPLVSLMRNLHHLKPTLR 480

Query: 617 RHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAISQEEASLR 660
           R FGRHI+ LSEEV  AKEAMDRAQR+VER+  S   SR A +AT++FW+A+  EEASLR
Sbjct: 481 RQFGRHIQSLSEEVHIAKEAMDRAQRDVERNSMSDVLSRQASLATETFWTAVRLEEASLR 540

[Close]

BLAST of PI0003542 vs. NCBI nr
Match: XP_008466769.1 (PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo])

HSP 1 Score: 528.1 bits (1359), Expect = 1.3e-145
Identity = 297/581 (51.12%), Postives = 374/581 (64.37%), Query Frame = 0


Query: 167 MELWTELGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLP------------ 226
           MELWTE G+AV+AS +GKP+SLDL TKERRRLS+ARVCVE++GG+++P            
Sbjct: 1   MELWTEAGLAVVASAVGKPISLDLTTKERRRLSYARVCVELEGGSNMPAQITVSLGGVDF 60

Query: 227 -----------------------TECPQKETSQVQQEVDVSMAVPSTGVEQAIVACGEVV 286
                                  ++C +   S+  QE  V   +           CGEVV
Sbjct: 61  NVSINYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEEVVHKIIHGKRDGLDSKPCGEVV 120

Query: 287 LESFKQLEEGEIQGSPSKQVSPTINGG------------------VRDKGKRKSMQALQ- 346
           LESFKQLEE EI+ SP++  S    GG                  VRD+G  KSM+ +  
Sbjct: 121 LESFKQLEEVEIRSSPNRHNSKVERGGGKSDEFTLVTRKKSELVSVRDRG--KSMEVIMP 180

Query: 347 NSFGSFSDLSEGENWALALKVSTPPPLQIVGGDGGMPRLSPNGGPMGIS----------- 406
           NSFGS  ++ + + WAL++   +PPPLQ+  G   +  +S + GP G+            
Sbjct: 181 NSFGSLLEVGDADKWALSIIEGSPPPLQVDEGTDVLSGVSSSIGPKGLHTLNNSHDYYSN 240

Query: 407 ---------------------VDERGL-GTLGVTLVAI-AEVYDCGGVCVYASNSNMDRR 466
                                VDE+ + GTL   L  +  EV+     CVYASNSN++RR
Sbjct: 241 SGVGQIWVMWKKNRFSFSTRVVDEQFVTGTLTDLLFGVCVEVF-----CVYASNSNIERR 300

Query: 467 VLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAIREADLVEPAVQ 526
           +LW RLVE TS+WSSPGVVMGDFNA+RVHSEA GGS +  +ME+FDLAIR+ADLVEP+VQ
Sbjct: 301 LLWHRLVETTSAWSSPGVVMGDFNAIRVHSEAFGGSPIQGEMEDFDLAIRDADLVEPSVQ 360

Query: 527 GNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDVEQQR 586
           GN  TWTSKV GSG LRRLDR+LVN+  L AWP++ V VLPWGISDHSPILFYP  +   
Sbjct: 361 GNWFTWTSKVHGSGMLRRLDRVLVNDAWLSAWPTMLVNVLPWGISDHSPILFYPSFQLNS 420

Query: 587 RIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLCRHFGRHIRGLS 646
           +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLMRNLH LK  L R FGRHI+ LS
Sbjct: 421 KVVSFRFFNHWVEDPSFIEVVARMWSRHEGVSPLVSLMRNLHHLKPTLRRQFGRHIQSLS 480

Query: 647 EEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAISQEEASLRQKSRVRWLELG 660
           EEV  AKEAMDRAQR+VER+  S   SR A +AT++FW+A+  EEASLRQKSR+RWL+LG
Sbjct: 481 EEVHIAKEAMDRAQRDVERNSMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 540

[Close]

BLAST of PI0003542 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 514.2 bits (1323), Expect = 1.9e-141
Identity = 305/645 (47.29%), Postives = 378/645 (58.60%), Query Frame = 0


Query: 124 ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIG 183
           ILSRGPWHLGGKPMLL KW  GIVPE+FVFNSVPVWI+LGRIPMELWTE  +A++ASV+G
Sbjct: 25  ILSRGPWHLGGKPMLLRKWTLGIVPESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVG 84

Query: 184 KPLSLDLATKERRRLSFARVCVEVKGGADLPTE--------------------------- 243
           KP++LDLATKE  RLS+ARVCV+++G  ++  E                           
Sbjct: 85  KPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCC 144

Query: 244 --------CPQKETSQVQQEVDVSMAVPSTGVEQAIVACGEVVLESFKQLEEGEIQGSPS 303
                   CP+   S++ QE  VS  +P  G       C +VVLESFKQLEEGEI+ SP+
Sbjct: 145 AIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPN 204

Query: 304 KQVSPTING------------------GVRDKGKRKSMQALQNSFGSFSDLSEGENWALA 363
           +  S                        VRD+GK   + A+ NSFGS  ++ + + WAL 
Sbjct: 205 RHGSHVEKEVGKRDEFTLVTRKKSELVSVRDRGK-SIVVAMPNSFGSLLEVGDVDKWALT 264

Query: 364 LKVSTPPPLQIVGGDGGMPRLSP-----------------------------------NG 423
           +   +PPPLQ+  G G +  L                                     N 
Sbjct: 265 VIEGSPPPLQVDEGTGVLSDLKSKAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNS 324

Query: 424 GPMGISVDERGLGTLGV---------TLVAIAEVYDCG-------GV-----CVYASNSN 483
                S    G+G + V         +   + E +  G       GV     CVYASNSN
Sbjct: 325 WDYSCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSN 384

Query: 484 MDRRVLWRRLVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRDMEEFDLAIREADLVE 543
           ++RR+LWRRLVEITS WSSP VVMGDFNA+RVH EA GGS +  +ME+FDLA R+ADLVE
Sbjct: 385 IERRLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEAFGGSPIQGEMEDFDLATRDADLVE 444

Query: 544 PAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDV 603
           P+VQGN  TWTSKV GSG LRRLDRILVN++ L AWP+L V                   
Sbjct: 445 PSVQGNWFTWTSKVHGSGMLRRLDRILVNDEWLSAWPTLLV------------------- 504

Query: 604 EQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHDLKLVLCRHFGRHI 660
                          VED SF +VV+ +W R  GVSPLVSLMRNL +LK  L R FGRHI
Sbjct: 505 -----------LQSLVEDPSFIEVVARMWGRHEGVSPLVSLMRNLQNLKPTLRRRFGRHI 564

[Close]

BLAST of PI0003542 vs. NCBI nr
Match: TYK18951.1 (uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 481.9 bits (1239), Expect = 1.1e-131
Identity = 369/1124 (32.83%), Postives = 468/1124 (41.64%), Query Frame = 0


Query: 53   NDVSKDKIYEKESVKEAANTQNLNCEGRIDSRNVDSLASLFGSSSRNGLSYTPPSLVGSK 112
            ++VS   +   ++   +   QN   +  IDS++  + ASLFG+SS   L YT P ++G K
Sbjct: 262  SNVSSGCVLNNQNANVSNVVQNGINKQLIDSKS--TWASLFGTSSEESLLYTLPKIIGDK 321

Query: 113  LVVIPLEEIIT------------------------------------------------- 172
            +VV P EE+I                                                  
Sbjct: 322  IVVTPPEEVIDQGIKVWENSLVGQLIDSKLPYTVIQHLVEKIWGKIEMPIITILENDLIC 381

Query: 173  -----------ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTE 232
                       ILSRGPWHL  K MLL KW PGIVPE FVFNSVPVWI+LG++PMELWTE
Sbjct: 382  FQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPGIVPEFFVFNSVPVWIRLGKLPMELWTE 441

Query: 233  LGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLPTEC--------------- 292
             G+AV+AS +GKP+SLDLATKERRRLS+ARVCVE++ G+++P E                
Sbjct: 442  AGLAVVASAVGKPISLDLATKERRRLSYARVCVELEAGSNMPAEITVSLRGVDFNVSVNY 501

Query: 293  ---PQKET---SQVQQEVDVSMAVPSTGVEQAIV---------ACGEVVLESFKQLEEGE 352
               P+K     +      + S +V S  +++ +V          CGEVVLESFKQLEEGE
Sbjct: 502  EWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEVVHKGDDVDSEPCGEVVLESFKQLEEGE 561

Query: 353  IQGSPSKQVSPTINGGVRDKGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIV 412
            I+ SP++  S  +  GV    +   +   ++   S  D           K  +PPPLQ+ 
Sbjct: 562  IRNSPNRHNS-QVEKGVGKSDEFTLVTRRKSELVSVRDRG---------KKGSPPPLQV- 621

Query: 413  GGDGGMPRLSPNGGPMGISVDERGLGTLGVTLVAIAEV-----------------YDCGG 472
              D G   L  NG      VD  G  ++G   +    V                 Y C  
Sbjct: 622  --DEGTDIL--NGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCS- 681

Query: 473  VCVYASNSNMDR-RVLWRR-----LVEITSSWSSPGVVMGDFNAVRVHSEACGGSLVTRD 532
                 SNS + R  V+W++        +       GVVMGDFNA+RV+SEA GGS +  +
Sbjct: 682  ----YSNSGVGRIWVMWKKNRFSFSTNVMDEQFITGVVMGDFNAIRVYSEAFGGSPIQGE 741

Query: 533  MEEFDLAIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLP 592
            ME+FDLAIR+ DLVEP VQGN  TWTSKV+G                             
Sbjct: 742  MEDFDLAIRDVDLVEPLVQGNWFTWTSKVQG----------------------------- 801

Query: 593  WGISDHSPILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNL 652
                           +   +++ FRFFNHWVED SF +VV+  W R  GVSPLVSLM+NL
Sbjct: 802  --------------FQLNSKVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNL 861

Query: 653  HDLKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAGVATDSFWSAI 712
            H LK +L   FGRHI+ L+E+V  AK AMD AQR+VER+P S   SR A +AT++FW+A+
Sbjct: 862  HHLKPILRGRFGRHIKSLNEKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAV 921

Query: 713  SQEEASLRQKSRVRWLELGDQNSAFFHRSIRSHIGRNNLLSIVDS--KGIRVTSHERLVQ 772
              EEASLRQKSR+RWL+LGDQN+AFFHR + S + RN+LLS+VDS   G RV+SH+ +V 
Sbjct: 922  RLEEASLRQKSRIRWLKLGDQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVH 981

Query: 773  VA---------------------------------------------------------- 779
            +A                                                          
Sbjct: 982  MAALQLPISREEVRRVLLTMDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDF 1041

[Close]

BLAST of PI0003542 vs. NCBI nr
Match: KAA0046247.1 (uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 480.3 bits (1235), Expect = 3.1e-131
Identity = 373/1134 (32.89%), Postives = 469/1134 (41.36%), Query Frame = 0


Query: 53   NDVSKDKIYEKESVKEAANTQNLNCEGRIDSRNVDSLASLFGSSSRNGLSYTPPSLVGSK 112
            ++VS   +   ++   +   QN   +  IDS++  + ASLFG+SS   L YT P ++G K
Sbjct: 262  SNVSSGCVLNNQNANVSNVVQNGINKQLIDSKS--TWASLFGTSSEESLLYTLPKIIGDK 321

Query: 113  LVVIPLEEIIT------------------------------------------------- 172
            +VV P E++I                                                  
Sbjct: 322  IVVTPPEKVIDQGIKVWENSLVGQLIDSKLPYTVIQHLVEKIWGKIEMPIITILENDLIC 381

Query: 173  -----------ILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTE 232
                       ILSRGPWHL  K MLL KW PGIVPE FVFNSVPVWI+LG++PMELWTE
Sbjct: 382  FQFRRSKSVEWILSRGPWHLDDKSMLLRKWTPGIVPEFFVFNSVPVWIRLGKLPMELWTE 441

Query: 233  LGIAVIASVIGKPLSLDLATKERRRLSFARVCVEVKGGADLPTEC--------------- 292
             G+AV+AS +GKP+SLDLATKERRRLS+ARVCVE++ G+++P E                
Sbjct: 442  AGLAVVASAVGKPISLDLATKERRRLSYARVCVELEAGSNMPAEITVSLRGVDFNVSVNY 501

Query: 293  ---PQKET---SQVQQEVDVSMAVPSTGVEQAIV---------ACGEVVLESFKQLEEGE 352
               P+K     +      + S +V S  +++ +V          CGEVVLESFKQLEEGE
Sbjct: 502  EWKPRKCNLCCAFGHSGSNCSRSVESKTIQEEVVHKGDDVDSEPCGEVVLESFKQLEEGE 561

Query: 353  IQGSPSKQVSPTINGGVRDKGKRKSMQALQNSFGSFSDLSEGENWALALKVSTPPPLQIV 412
            I+ SP++  S  +  GV    +   +   ++   S  D           K  +PPPLQ+ 
Sbjct: 562  IRNSPNRHNS-QVEKGVGKSDEFTLVTRRKSELVSVRDRG---------KKGSPPPLQV- 621

Query: 413  GGDGGMPRLSPNGGPMGISVDERGLGTLGVTLVAIAEV-----------------YDCGG 472
              D G   L  NG      VD  G  ++G   +    V                 Y C  
Sbjct: 622  --DEGTDIL--NGMKSKAVVDFLGSSSVGFCCLLETRVREGNFDSVSKRFSNSWDYSCS- 681

Query: 473  VCVYASNSNMDR-RVLWRR---------------LVEITSSWSSPGVVMGDFNAVRVHSE 532
                 SNS + R  V+W++                VEITS+WSSPGVVMGDFNA+RV+SE
Sbjct: 682  ----YSNSGVGRIWVMWKKNRFSFSTNVMDEQFITVEITSAWSSPGVVMGDFNAIRVYSE 741

Query: 533  ACGGSLVTRDMEEFDLAIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMA 592
            A GGS +  +ME+FDLAIR+ DLVEP VQGN     SKV                     
Sbjct: 742  AFGGSPIQGEMEDFDLAIRDVDLVEPLVQGNCFQLNSKV--------------------- 801

Query: 593  WPSLRVTVLPWGISDHSPILFYPDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGV 652
                                           + FRFFNHWVED SF +VV+  W R  GV
Sbjct: 802  -------------------------------VSFRFFNHWVEDPSFIEVVARRWSRHEGV 861

Query: 653  SPLVSLMRNLHDLKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGSVERSRDAG 712
            SPLVSLM+NLH LK +L   FGRHI+ L+E+V  AK AMD AQR+VER+P S   SR A 
Sbjct: 862  SPLVSLMKNLHHLKPILRGRFGRHIKSLNEKVRIAKLAMDIAQRKVERNPMSDVLSRQAS 921

Query: 713  VATDSFWSAISQEEASLRQKSRVRWLELGDQNSAFFHRSIRSHIGRNNLLSIVDS--KGI 772
            +AT++FW+A+  EEASLRQKSR+RWL+LGDQN+AFFHR + S + RN+LLS+VDS   G 
Sbjct: 922  LATETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRFVYSRMSRNSLLSLVDSDGDGS 981

Query: 773  RVTSHERLVQVA------------------------------------------------ 779
            RV+SH+ +V +A                                                
Sbjct: 982  RVSSHDGVVHMAALQLPISREEVRRVLLTMDSGKAPGPDGFSLGFFKVWVNATAITLIPK 1041

[Close]

BLAST of PI0003542 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 4.4e-19
Identity = 73/271 (26.94%), Postives = 133/271 (49.08%), Query Frame = 0


Query: 396 VVMGDFNAVRV---HSEACGGSLVTRDMEEFDLAIREADLVEPAVQGNRCTWTSKVRGSG 455
           +++GDF+ +     H      S+  R +EEF   +R++DLV+   +G   TW++    + 
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281

Query: 456 RLRRLDRILVNEQGLMAWPSLRVTVLPWGISDHSPILFYPDVEQQRRIILFRFFNHWVED 515
            +R+LDR + N     ++PS        G+SDHSP +   +   +R    FR+F+     
Sbjct: 282 IIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTH 341

Query: 516 SSFSDVVSSVWVRKLGV-SPLVSLMRNLHDLKLVLCRHFGRHIRG-LSEEVCSAKEAMDR 575
            +F   ++  W  ++ V S + SL  +L   K   C+   R   G +  +   A ++++ 
Sbjct: 342 PTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAK-KCCKLLNRQGFGNIQHKTKEALDSLES 401

Query: 576 AQREVERDPG-SVERSRDAGVATDSFWSAISQEEASLRQKSRVRWLELGDQNSAFFHRSI 635
            Q ++  +P  S+ R         +F++A    E+  RQKSR++WL+ GD N+ FFH+ I
Sbjct: 402 IQSQLLTNPSDSLFRVEHVARKKWNFFAAAL--ESFYRQKSRIKWLQDGDANTRFFHKVI 461

Query: 636 RSHIGRNNLLSIVDSKGIRVTSHERLVQVAE 661
            ++  +N +  +     +RV   E + QV E
Sbjct: 462 LANQAKNLIKFLRMDDDVRV---ENVTQVKE 486

[Close]

BLAST of PI0003542 vs. TAIR 10
Match: AT1G40390.1 (DNAse I-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-14
Identity = 63/259 (24.32%), Postives = 120/259 (46.33%), Query Frame = 0


Query: 372 NSNMDRRVLWRRLVEITSS---WSSPGVVMGDFN---AVRVHSEACGGSLVTRDMEEFDL 431
           N+  +RR LW  +  +++S    +SP +V+GDFN   +V  H      ++  + +E+   
Sbjct: 96  NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155

Query: 432 AIREADLVEPAVQGNRCTWTSKVRGSGRLRRLDRILVNEQGLMAWPSLRVTVLPWGISDH 491
            +R++DLV+   +G   TW++  + +  LR+LDR +VN   L  +P+      P   SDH
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDH 215

Query: 492 SPILFY----PDVEQQRRIILFRFFNHWVEDSSFSDVVSSVWVRKLGVSPLVSLMRNLHD 551
           +  +      P + +++    F++F+       F   + + W +++ V   +  +  L  
Sbjct: 216 AACMVILNNSPPLSKKKS---FKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLK 275

Query: 552 LKLVLCRHFGRHIRGLSEEVCSAKEAMDRAQREVERDPGS-VERSRDAGVATDSFWSAIS 611
                CR   R  RG S             Q ++  +P   + R+        +F++A  
Sbjct: 276 EAKKACRGLNR--RGFS-----------NIQAQLMSNPSDFLFRAEHVARKNWNFFAAAL 335

Query: 612 QEEASLRQKSRVRWLELGD 620
             E+  +QKSR++WL+ GD
Sbjct: 336 --ESFYKQKSRIKWLKEGD 336

[Close]

BLAST of PI0003542 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 70.1 bits (170), Expect = 9.0e-12
Identity = 32/111 (28.83%), Postives = 51/111 (45.95%), Query Frame = 0


Query: 674 VDVCHPLKERGLNIREGKSWNSACILKILWLKLTSSGSLWVAWVEAYILKG------RPL 733
           + VC P  E GL +R    WN+   LK++W   +  GSLWV W   + L+G         
Sbjct: 16  IAVCLPKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSLWVDWHRYHHLQGLGDASVSKF 75

Query: 734 WSVDSGVGRFWSLRAILKHRDIFREHVHMEVGDGRCYRVWLDPWLHGGAII 779
           W+    V   W+ + +L+ R +    +   +G+G   R W D W   G ++
Sbjct: 76  WTSQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTPFGPLL 126

[Close]

BLAST of PI0003542 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-09
Identity = 30/89 (33.71%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 119 EEIITILSRGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVI 178
           EE +  L+ GPW + G  +L+  W     P      + PVW++L  IP   +    +  I
Sbjct: 127 EEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEI 186

Query: 179 ASVIGKPLSLDLATKERRRLSFARVCVEV 208
           A  +G+PL +D+ T    +  FARVC+EV
Sbjct: 187 ARGLGRPLKVDMNTINFDKGRFARVCIEV 215

[Close]

BLAST of PI0003542 vs. TAIR 10
Match: AT5G28823.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT2G07760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 7.4e-06
Identity = 45/165 (27.27%), Postives = 71/165 (43.03%), Query Frame = 0


Query: 127 RGPWHLGGKPMLLHKWVPGIVPETFVFNSVPVWIKLGRIPMELWTELGIAVIASVIGKPL 186
           R  WH+    M +  W P    E      +P W+ L  IP +L++  GI  IAS IG+ +
Sbjct: 223 RALWHVDDCLMFVSTWSPVANFEVPEITMIPAWLTLKNIPNQLYSFKGIKWIASGIGETM 282

Query: 187 SLDLATKERRRLSFARVCVEVKGGADLPTECPQKETSQVQQEVDVSMA-VPSTGVEQAIV 246
                  +  ++  A++ VEVK     P     KE       VDV  + +PS  +E+ +V
Sbjct: 283 LTSRPWLDPTQMGEAKILVEVKLDKPFPQRVALKEECGSITMVDVVYSWLPSKCLEKTVV 342

Query: 247 ACGEVVLESFKQLEEGEIQGSPSKQVSPTI--NGGVRDKGKRKSM 289
           +       +   L E  I  + +K +   I  NG    KG  K++
Sbjct: 343 S----ACNNGTPLNENSIVNASTKALDTAIVSNGAAILKGFHKTV 383

The following BLAST results are available for this feature:

BLAST of PI0003542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	2.0e-08	31.53	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of PI0003542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V275	9.6e-155	51.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18...	[more]
A0A1S3CRZ6	6.3e-146	51.12	uncharacterized protein LOC103504100 OS=Cucumis melo OX=3656 GN=LOC103504100 PE=...	[more]
A0A5A7V5J2	9.3e-142	47.29	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5D3D5X6	5.1e-132	32.83	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TWG5	1.5e-131	32.89	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of PI0003542 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059841.1	2.0e-154	51.86	reverse transcriptase [Cucumis melo var. makuwa] >TYK24796.1 reverse transcripta...	[more]
XP_008466769.1	1.3e-145	51.12	PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]	[more]
KAA0062888.1	1.9e-141	47.29	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
TYK18951.1	1.1e-131	32.83	uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]	[more]
KAA0046247.1	3.1e-131	32.89	uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]	[more]

BLAST of PI0003542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	4.4e-19	26.94	DNAse I-like superfamily protein	[more]
AT1G40390.1	1.5e-14	24.32	DNAse I-like superfamily protein	[more]
AT3G25720.1	9.0e-12	28.83	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G01050.1	4.2e-09	33.71	zinc ion binding;nucleic acid binding	[more]
AT5G28823.1	7.4e-06	27.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 121..205 e-value: 3.1E-21 score: 75.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 359..490 e-value: 7.2E-15 score: 57.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 366..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..283
None	No IPR available	PANTHER	PTHR33116:SF39	RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEIN	coord: 367..546
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 367..546

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003542.1	PI0003542.1	mRNA