PI0003531 (gene) Melon (PI 482460) v1

Overview
NamePI0003531
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 692451 .. 692813 (-)
RNA-Seq ExpressionPI0003531
SyntenyPI0003531
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGGCGATGGTAATCGGGGCTTACATTCGGACCCAAATCACCCATATTCATCCCGAACCTCAGCTTCGGTCCGAGCCTCATTTCTGTGCCCCAGTTCGTTGAAATTTTCGCACTCTTTCGATCACTTTATCTCTCTCTTTCTCTCTCTCTCTCTGAGCTCGGGGAGGCTCATATAGTCGTATCTCTCTCTCTCTCTGATTCAAACCCTAACACTTCACAATCCAGCATTATCAGAGGATCGCCTTCAAGTTTCTTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCTCCCTTTTCTGCGGGTCATTTCTTTTAGGAAATAG

mRNA sequence

ATGGCGATGGCGATGGTAATCGGGGCTTACATTCGGACCCAAATCACCCATATTCATCCCGAACCTCAGCTTCGGTCCGAGCCTCATTTCTGTGCCCCACATTATCAGAGGATCGCCTTCAAGTTTCTTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCTCCCTTTTCTGCGGGTCATTTCTTTTAGGAAATAG

Coding sequence (CDS)

ATGGCGATGGCGATGGTAATCGGGGCTTACATTCGGACCCAAATCACCCATATTCATCCCGAACCTCAGCTTCGGTCCGAGCCTCATTTCTGTGCCCCACATTATCAGAGGATCGCCTTCAAGTTTCTTACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCTCCCTTTTCTGCGGGTCATTTCTTTTAGGAAATAG

Protein sequence

MAMAMVIGAYIRTQITHIHPEPQLRSEPHFCAPHYQRIAFKFLTQAHQISVSSLPPSFIFKNPNFLPFLRVISFRK
Homology
[Close]
BLAST of PI0003531 vs. ExPASy TrEMBL
Match: A0A0A0LVL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.8e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MAMAMVIGAYIRTQITHIHPEPQLRSEPHFCAPHYQRIAFKFLTQAHQISVSSLPPSFIF 60
          MAMAMVIGA+IRTQITHIHPEPQLRS+P FCAPHYQRIAFKF TQAHQISVSSLPPSFIF
Sbjct: 1  MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60

Query: 61 KNPNFLPFLRVISFRK 77
          KNPNF PFLRV+SFRK
Sbjct: 61 KNPNFPPFLRVVSFRK 76

[Close]
BLAST of PI0003531 vs. NCBI nr
Match: KGN64041.1 (hypothetical protein Csa_013264 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 7.9e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MAMAMVIGAYIRTQITHIHPEPQLRSEPHFCAPHYQRIAFKFLTQAHQISVSSLPPSFIF 60
          MAMAMVIGA+IRTQITHIHPEPQLRS+P FCAPHYQRIAFKF TQAHQISVSSLPPSFIF
Sbjct: 1  MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60

Query: 61 KNPNFLPFLRVISFRK 77
          KNPNF PFLRV+SFRK
Sbjct: 61 KNPNFPPFLRVVSFRK 76

[Close]
BLAST of PI0003531 vs. NCBI nr
Match: KAG7037139.1 (hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 53.5 bits (127), Expect = 9.1e-04
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 3  MAMVIGAYIRTQITHIHPEPQLRSEPHFCAP 34
          MAM IGA IRTQI HIHP P++RSEP  CAP
Sbjct: 1  MAMAIGAQIRTQIIHIHPRPEVRSEPQLCAP 31

The following BLAST results are available for this feature:
BLAST of PI0003531 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003531 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVL33.8e-3292.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1[more]
BLAST of PI0003531 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64041.17.9e-3292.11hypothetical protein Csa_013264 [Cucumis sativus][more]
KAG7037139.19.1e-0474.19hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of PI0003531 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003531.1PI0003531.1mRNA