PI0003518 (gene) Melon (PI 482460) v1

Overview
NamePI0003518
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionProtein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE
Locationchr08: 5702502 .. 5703046 (+)
RNA-Seq ExpressionPI0003518
SyntenyPI0003518
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTTATACTCTGCCCTTCATTCTCCACTCATCGACGCCCTACAAAAATCATTTCTTTTCTTCTGCCTCTTTTGTTACGCATAAAAACTCCACGACTTTACTCCGATATGCACGAGAAGAGAACCCAATTGGGTCGTATCCAAATTTTGCCTTCCCCCGCGGCCGCGGCGGTGGTAGAGTTTCATGGTGAGGGGATTTTTTAGTTTCAGATCGGTGGCAATGTTGATTGTTGTGGCGGTCTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGTGTTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTTTGTTCTTAGCGTTGTCGCCATCGGAGGTTCCGGCGGAGGAGCACCGTGAGACTGAAGGCGGCGGTGGGCACAACTCGGCTTGATTTTTTGTTGATTAGAAAGTATATATAGTGAGAGGATGATGAAAATGGATGTGGGGATTTTCAATTTTTGGTTCTTCTTTGTTCAATGTATAATGGAAATTTTTTTTAGTGTAGTTGAATGTTTTTTCG

mRNA sequence

TTTCTTTATACTCTGCCCTTCATTCTCCACTCATCGACGCCCTACAAAAATCATTTCTTTTCTTCTGCCTCTTTTGTTACGCATAAAAACTCCACGACTTTACTCCGATATGCACGAGAAGAGAACCCAATTGGGTCGTATCCAAATTTTGCCTTCCCCCGCGGCCGCGGCGGTGGTAGAGTTTCATGGTGAGGGGATTTTTTAGTTTCAGATCGGTGGCAATGTTGATTGTTGTGGCGGTCTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGTGTTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTTTGTTCTTAGCGTTGTCGCCATCGGAGGTTCCGGCGGAGGAGCACCGTGAGACTGAAGGCGGCGGTGGGCACAACTCGGCTTGATTTTTTGTTGATTAGAAAGTATATATAGTGAGAGGATGATGAAAATGGATGTGGGGATTTTCAATTTTTGGTTCTTCTTTGTTCAATGTATAATGGAAATTTTTTTTAGTGTAGTTGAATGTTTTTTCG

Coding sequence (CDS)

ATGGTGAGGGGATTTTTTAGTTTCAGATCGGTGGCAATGTTGATTGTTGTGGCGGTCTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGTGTTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTTTGTTCTTAGCGTTGTCGCCATCGGAGGTTCCGGCGGAGGAGCACCGTGAGACTGAAGGCGGCGGTGGGCACAACTCGGCTTGA

Protein sequence

MVRGFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHRETEGGGGHNSA
Homology
BLAST of PI0003518 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.7e-08
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEH 64
           +FS  S+ +L+ V  SL+ILPLVLPPLPPPP +L+ VPV ++ LLL LA  P+   +   
Sbjct: 99  YFSVESLLLLVCVTASLVILPLVLPPLPPPPSMLMLVPVAMLVLLLALAFMPTTTSSSSS 158

Query: 65  RETEGGGGHNSA 77
               GGGG N A
Sbjct: 159 AGGGGGGGRNGA 170

BLAST of PI0003518 vs. ExPASy Swiss-Prot
Match: Q8RWS1 (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.0e-07
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 9  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPA 62
          RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

BLAST of PI0003518 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-06
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FS  S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 71  YFSLESLVILVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLIILAFMPS 123

BLAST of PI0003518 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FS  S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

BLAST of PI0003518 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FS  S+ +L+ +  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

BLAST of PI0003518 vs. ExPASy TrEMBL
Match: A0A0A0L0Y7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 0

Query: 1  MVRGFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60
          MVRGFFS RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP
Sbjct: 1  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60

Query: 61 AEEHRETEGGGGHNSA 77
          AEEH ET+GG   NSA
Sbjct: 61 AEEHHETDGGDEDNSA 76

BLAST of PI0003518 vs. ExPASy TrEMBL
Match: A0A5A7SII5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003090 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 56/64 (87.50%), Postives = 59/64 (92.19%), Query Frame = 0

Query: 13 MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHRETEGGGG 72
          MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE PAE HR T+  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 73 HNSA 77
          +NSA
Sbjct: 61 YNSA 64

BLAST of PI0003518 vs. ExPASy TrEMBL
Match: A0A5D3BWW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00300 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-16
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 13 MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHRETEGGGG 72
          MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE PAE HR T+  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

Query: 73 HNSA 77
           NSA
Sbjct: 61 FNSA 64

BLAST of PI0003518 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09
Identity = 36/60 (60.00%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1   MVRGFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60
           M+  FFS R+V +++V+ VSLL+LP+VLPPLPPPP++LLF+P+LIM++L+ LA SPS++P
Sbjct: 89  MLVRFFSLRAVVIMVVLTVSLLVLPVVLPPLPPPPLMLLFIPILIMAVLILLAFSPSQLP 148

BLAST of PI0003518 vs. ExPASy TrEMBL
Match: A0A2N9F7M5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10977 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.8e-09
Identity = 37/55 (67.27%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 6  FSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 61
          ++ R + +++++ VSLL+LPLVLPPLPPPP+LLLFVPVL+MSLL+FLAL+PS+VP
Sbjct: 5  YTVRFITVMLLLTVSLLVLPLVLPPLPPPPLLLLFVPVLMMSLLVFLALTPSQVP 59

BLAST of PI0003518 vs. NCBI nr
Match: KAG6603314.1 (hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0

Query: 1  MVRGFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60
          MVR FFS RSVAMLIVVA SLLILPLVLPPLPPPPVLLLFVPVLIM  LLFLALSPSEVP
Sbjct: 1  MVRAFFSLRSVAMLIVVAASLLILPLVLPPLPPPPVLLLFVPVLIMFFLLFLALSPSEVP 60

Query: 61 AEEHR-ETEGGGGHNSA 77
          AEEHR   +GGGGH+SA
Sbjct: 61 AEEHRVGADGGGGHDSA 77

BLAST of PI0003518 vs. NCBI nr
Match: KAA0025988.1 (hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 56/64 (87.50%), Postives = 59/64 (92.19%), Query Frame = 0

Query: 13 MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHRETEGGGG 72
          MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE PAE HR T+  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 73 HNSA 77
          +NSA
Sbjct: 61 YNSA 64

BLAST of PI0003518 vs. NCBI nr
Match: TYK04223.1 (hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 13 MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPAEEHRETEGGGG 72
          MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE PAE HR T+  GG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

Query: 73 HNSA 77
           NSA
Sbjct: 61 FNSA 64

BLAST of PI0003518 vs. NCBI nr
Match: KAG2683596.1 (hypothetical protein I3760_10G039000 [Carya illinoinensis] >KAG6690947.1 hypothetical protein I3842_10G039100 [Carya illinoinensis] >KAG7958838.1 hypothetical protein I3843_10G039300 [Carya illinoinensis])

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 41/57 (71.93%), Postives = 52/57 (91.23%), Query Frame = 0

Query: 4  GFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 61
          G+FS RS+ ++IV+AVSL+++PL+LPPLPPPP+LLLFVPVLIMSLL+ LALS S VP
Sbjct: 3  GYFSARSIVVMIVLAVSLVVVPLLLPPLPPPPLLLLFVPVLIMSLLVVLALSSSHVP 59

BLAST of PI0003518 vs. NCBI nr
Match: KAG2687345.1 (hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothetical protein I3842_09G047400 [Carya illinoinensis] >KAG7962070.1 hypothetical protein I3843_09G047700 [Carya illinoinensis])

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08
Identity = 38/60 (63.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MVRGFFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60
          M R + S  ++ +++V+ VSL++LPLV+PPLPPPP+LLLFVPVLIMSLL+ LALSPS+ P
Sbjct: 1  MFRYYMSVGTIVVMVVLTVSLMVLPLVVPPLPPPPLLLLFVPVLIMSLLVVLALSPSQTP 60

BLAST of PI0003518 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-08
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 9  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVPA 62
          RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

BLAST of PI0003518 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like )

HSP 1 Score: 52.0 bits (123), Expect = 2.5e-07
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FS  S+ +L+ +  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

BLAST of PI0003518 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size )

HSP 1 Score: 52.0 bits (123), Expect = 2.5e-07
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 5   FFSFRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FS  S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

BLAST of PI0003518 vs. TAIR 10
Match: AT2G41225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 7.4e-04
Identity = 22/39 (56.41%), Postives = 33/39 (84.62%), Query Frame = 0

Query: 16 VVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLAL 55
          VV V L +LP VLPPLPPPP++L+ +PV++M +L++LA+
Sbjct: 6  VVMVLLAVLPAVLPPLPPPPMILMGIPVVLMLMLIYLAI 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7X6L23.7e-0850.00Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon... [more]
Q8RWS17.0e-0760.38Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1[more]
C7SFP61.6e-0660.38Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki... [more]
Q6NMD63.5e-0660.38Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3... [more]
Q8RXL73.5e-0656.60ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L0Y78.5e-2492.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1[more]
A0A5A7SII51.3e-1687.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BWW36.5e-1687.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5B7AL584.5e-0960.00Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276... [more]
A0A2N9F7M57.8e-0967.27Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10977 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6603314.13.7e-2187.01hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0025988.12.7e-1687.50hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa][more]
TYK04223.11.4e-1587.50hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa][more]
KAG2683596.11.4e-0971.93hypothetical protein I3760_10G039000 [Carya illinoinensis] >KAG6690947.1 hypothe... [more]
KAG2687345.12.7e-0863.33hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothe... [more]
Match NameE-valueIdentityDescription
AT2G41230.15.0e-0860.38unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact... [more]
AT2G44080.12.5e-0756.60ARGOS-like [more]
AT3G59900.12.5e-0760.38auxin-regulated gene involved in organ size [more]
AT2G41225.17.4e-0456.41unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38928:SF8ARGOS7coord: 2..66
NoneNo IPR availablePANTHERPTHR38928ARGOS7coord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003518.1PI0003518.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046622 positive regulation of organ growth
biological_process GO:0009725 response to hormone
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus