PI0003417 (gene) Melon (PI 482460) v1

Overview


Name	PI0003417
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 5811444 .. 5812149 (+)
RNA-Seq Expression	PI0003417
Synteny	PI0003417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAGAAACCCCTTACCTCGGATGCTAAGGTCAAAATACACTATGCGGCCAGAAGAGATCCAAAACGCGAGAAGAAGAGCTCCAAATGCTTACTCCTCGGTAAGACAACACACTACGCGGCAAGACCAAACACCAGGCGAAAAGGCTTAAACTCAAGAATTTGGAGAAGAACCAAACCAAACCGCAACAATGAAGACTTACCTCGCAACCAAGGAACTCGCGAAACGAAGAGGCGGGCAGAGACCTCAGAACACGGCGAGACACTCCAGCTCGCGGACAAGGGCAACTTGGCGAGACACGAGGTAGAACGCAAACCACAGCTGGCGGCAAGGGAAGCTTGCGAATTAACACTTCAGCTCGCCGACTAAGCTTCACAGCTTGCGAACACACTTTCTCCAGTGAACAAAGAGGCTTACTGAAGCTAAGGCAGAACGCGGACTAAGGGGACTGCCAAGAGAAGAGTTTTACTTCGCGGGGAGTAAAGATTTAAGAACAGAACGCGAAGAAGAAATGGAGAATGAGCTTTCGGTGAACTTACCCACGAAGTGCACTCTACGGCAAAGCTTGGTGAAAGGAAGGATTTTACGCCACACTACTCTACAAGGCGAACTAACCCAGGCCGTGCACCCAAGCTACAAGGCTTCTGGTGGTATGGGCAGGCGGAGGAAAGCTTCTGAACGGCGAGGCAACGCGCGGCGCTGA

mRNA sequence

ATGGTAGAGAAACCCCTTACCTCGGATGCTAAGGTCAAAATACACTATGCGGCCAGAAGAGATCCAAAACGCGAGAAGAAGAGCTCCAAATGCTTACTCCTCGGTAAGACAACACACTACGCGGCAAGACCAAACACCAGGCGAAAAGGCTTAAACTCAAGAATTTGGAGAAGAACCAAACCAAACCGCAACAATGAAGACTTACCTCGCAACCAAGGAACTCGCGAAACGAAGAGGCGGGCAGAGACCTCAGAACACGGCGAGACACTCCAGCTCGCGGACAAGGGCAACTTGGCGAGACACGAGAGGCTTACTGAAGCTAAGGCAGAACGCGGACTAAGGGGACTGCCAAGAGAAGAGTTTTACTTCGCGGGGAGTAAAGATTTAAGAACAGAACGCGAAGAAGAAATGGAGAATGAGCTTTCGGTGAACTTACCCACGAAGTGCACTCTACGGCAAAGCTTGGTGAAAGGAAGGATTTTACGCCACACTACTCTACAAGGCGAACTAACCCAGGCCGTGCACCCAAGCTACAAGGCTTCTGGTGGTATGGGCAGGCGGAGGAAAGCTTCTGAACGGCGAGGCAACGCGCGGCGCTGA

Coding sequence (CDS)

ATGGTAGAGAAACCCCTTACCTCGGATGCTAAGGTCAAAATACACTATGCGGCCAGAAGAGATCCAAAACGCGAGAAGAAGAGCTCCAAATGCTTACTCCTCGGTAAGACAACACACTACGCGGCAAGACCAAACACCAGGCGAAAAGGCTTAAACTCAAGAATTTGGAGAAGAACCAAACCAAACCGCAACAATGAAGACTTACCTCGCAACCAAGGAACTCGCGAAACGAAGAGGCGGGCAGAGACCTCAGAACACGGCGAGACACTCCAGCTCGCGGACAAGGGCAACTTGGCGAGACACGAGAGGCTTACTGAAGCTAAGGCAGAACGCGGACTAAGGGGACTGCCAAGAGAAGAGTTTTACTTCGCGGGGAGTAAAGATTTAAGAACAGAACGCGAAGAAGAAATGGAGAATGAGCTTTCGGTGAACTTACCCACGAAGTGCACTCTACGGCAAAGCTTGGTGAAAGGAAGGATTTTACGCCACACTACTCTACAAGGCGAACTAACCCAGGCCGTGCACCCAAGCTACAAGGCTTCTGGTGGTATGGGCAGGCGGAGGAAAGCTTCTGAACGGCGAGGCAACGCGCGGCGCTGA

Protein sequence

MVEKPLTSDAKVKIHYAARRDPKREKKSSKCLLLGKTTHYAARPNTRRKGLNSRIWRRTKPNRNNEDLPRNQGTRETKRRAETSEHGETLQLADKGNLARHERLTEAKAERGLRGLPREEFYFAGSKDLRTEREEEMENELSVNLPTKCTLRQSLVKGRILRHTTLQGELTQAVHPSYKASGGMGRRRKASERRGNARR

Homology

The following BLAST results are available for this feature:

BLAST of PI0003417 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003417 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003417 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003417 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003417.1	PI0003417.1	mRNA